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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:32.0TPM
GTEx:41.4RPKM
FANTOM5:59.3Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:High
Hepatocytes:High
 

Antibody staining

Antibody HPA039505

 

Bile duct cells

High  

Hepatocytes

High  
 
 

LIVER - HPA RNA-seq

Average TPM

32.0

N/A Female, age 60
Sample 1
TPM: 40.7
overview Male, age 54
Sample 2
TPM: 32.7
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 39.8
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 19.5
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 18.3
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 29.8
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 26.2
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 36.8
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 33.8
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 42.5
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

41.4

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 41.4
Samples: 119

Max RPKM: 95.6
Min RPKM: 15.5
Std RPKM: 12.7
Median RPKM: 38.6
GTEX-13NZ9-1326-SM-5MR3V 95.6
GTEX-12WSG-0626-SM-5FQTQ 88.7
GTEX-13QJC-0726-SM-5RQJK 79.5
GTEX-13SLX-1226-SM-5S2Q6 74.5
GTEX-146FH-1526-SM-5NQBU 69.9
GTEX-Q734-0326-SM-48U15 67.0
GTEX-14AS3-0126-SM-5Q5F4 66.3
GTEX-R53T-0326-SM-48FEC 61.2
GTEX-YFC4-1526-SM-5IFJS 60.9
GTEX-P78B-1326-SM-3P611 59.2
GTEX-X4XY-1626-SM-46MVN 57.9
GTEX-14A5I-1726-SM-5QGQ5 57.6
GTEX-1497J-0726-SM-5Q5D1 55.6
GTEX-11WQC-0726-SM-5EQMR 52.9
GTEX-S33H-1626-SM-4AD68 52.9
GTEX-X261-1726-SM-4PQYT 52.3
GTEX-13N2G-0926-SM-5IFGJ 51.6
GTEX-QEL4-1226-SM-447A4 50.6
GTEX-139TS-1426-SM-5IFJD 50.1
GTEX-12WSM-0726-SM-5GCOW 49.9
GTEX-X4EP-1026-SM-4QAS5 49.6
GTEX-139TU-0826-SM-5IJFG 49.5
GTEX-REY6-1226-SM-48FDR 48.7
GTEX-11ZUS-2526-SM-59872 48.5
GTEX-1399R-1226-SM-5P9GF 48.0
GTEX-UPK5-1426-SM-4JBHH 47.7
GTEX-145MO-2326-SM-5NQ9K 47.3
GTEX-WQUQ-1926-SM-4OOSA 47.1
GTEX-13N11-0926-SM-5IJG2 46.9
GTEX-QEG4-1826-SM-4R1JN 46.9
GTEX-131XE-0326-SM-5LZVO 46.8
GTEX-13NYB-1026-SM-5IFH3 46.4
GTEX-Y5LM-0426-SM-4VBRO 46.4
GTEX-ZAB5-0426-SM-5CVMI 46.2
GTEX-1212Z-0226-SM-59HLF 46.1
GTEX-139YR-0226-SM-5IFEM 45.8
GTEX-X4EO-1126-SM-4QARQ 45.6
GTEX-13112-1426-SM-5EGH8 45.3
GTEX-14DAQ-1726-SM-5S2R2 45.2
GTEX-145MF-0826-SM-5QGQA 44.7
GTEX-RU72-1426-SM-46MUF 44.7
GTEX-ZVP2-0626-SM-51MSO 44.7
GTEX-Y5V5-0926-SM-4VBPZ 44.5
GTEX-VUSG-0126-SM-4KL1X 44.2
GTEX-YB5E-0326-SM-5IFHU 43.8
GTEX-147JS-1126-SM-5RQIW 42.9
GTEX-13113-1326-SM-5GCOI 42.2
GTEX-SJXC-1226-SM-4DM78 41.3
GTEX-11ZTS-1426-SM-5EQMM 41.2
GTEX-14753-1626-SM-5NQ9L 41.1
GTEX-RM2N-1926-SM-48FCU 41.0
GTEX-13NZB-0626-SM-5IFH6 40.7
GTEX-11ZVC-0726-SM-5FQT9 40.3
GTEX-13FTZ-0726-SM-5IFFY 40.2
GTEX-UPIC-0926-SM-4IHLV 39.6
GTEX-131YS-1626-SM-5HL6C 39.4
GTEX-11EQ9-0526-SM-5A5JZ 39.3
GTEX-QESD-2026-SM-447BI 39.3
GTEX-13FLV-0326-SM-5N9DJ 38.7
GTEX-131XH-0626-SM-5LZWH 38.6
GTEX-Q2AG-1126-SM-48U1P 38.6
GTEX-13FTW-1126-SM-5J2NV 38.3
GTEX-ZTPG-1426-SM-51MT3 38.3
GTEX-11DXY-0526-SM-5EGGQ 38.2
GTEX-132NY-0926-SM-5P9G3 37.8
GTEX-12KS4-1326-SM-5LUB3 37.7
GTEX-14E1K-0326-SM-5S2PE 37.5
GTEX-1399T-0826-SM-5IFES 37.4
GTEX-RN64-1826-SM-48FDV 37.0
GTEX-ZVT3-1626-SM-5GU66 37.0
GTEX-ZYY3-0626-SM-5NQ6W 37.0
GTEX-13O3O-1826-SM-5IFGW 36.6
GTEX-12WSI-0226-SM-5GCNA 36.5
GTEX-QV44-0326-SM-4R1KD 36.5
GTEX-YECK-1926-SM-4W21H 36.5
GTEX-XOTO-0826-SM-4B65O 36.4
GTEX-ZF2S-3026-SM-4WWCH 36.3
GTEX-ZYT6-0626-SM-5E45V 36.3
GTEX-WYVS-1926-SM-4PQZ2 36.2
GTEX-11NV4-1326-SM-5HL6V 36.0
GTEX-RTLS-1326-SM-46MUN 35.6
GTEX-ZPU1-0826-SM-57WG2 35.3
GTEX-ZVT4-0626-SM-5E45T 34.8
GTEX-11GSP-0626-SM-5986T 34.6
GTEX-RNOR-1426-SM-48FDJ 34.1
GTEX-T6MN-1226-SM-3NMA5 34.0
GTEX-RWSA-1426-SM-47JXA 33.8
GTEX-OOBJ-0826-SM-3NB2K 33.6
GTEX-UTHO-2426-SM-4JBHD 33.6
GTEX-12WSL-0226-SM-5CVMJ 33.2
GTEX-12WSD-1426-SM-5GCN9 32.9
GTEX-S4Z8-0526-SM-4AD4T 32.5
GTEX-XBEC-1526-SM-4AT68 32.4
GTEX-PX3G-0826-SM-48TZS 32.3
GTEX-13VXU-0926-SM-5IFFH 32.0
GTEX-1269C-0626-SM-5FQSS 31.8
GTEX-WZTO-0626-SM-4PQYY 31.0
GTEX-11OF3-0726-SM-5BC4Z 30.6
GTEX-13PVR-0126-SM-5S2PY 30.3
GTEX-S32W-1926-SM-4AD63 30.3
GTEX-11NUK-1226-SM-5P9GM 30.2
GTEX-12696-0826-SM-5EGGE 30.0
GTEX-13OW6-2626-SM-5IFF2 29.9
GTEX-147F4-1426-SM-5LUA8 29.7
GTEX-ZZPU-0426-SM-5GZYH 29.5
GTEX-145LU-1326-SM-5LU9N 29.1
GTEX-Z9EW-0426-SM-5CVM9 29.0
GTEX-X3Y1-2726-SM-4PQZH 28.6
GTEX-YEC4-0826-SM-5P9FV 28.2
GTEX-WFON-1726-SM-4LVMQ 27.9
GTEX-TKQ2-1726-SM-4DXUP 27.7
GTEX-ZF29-2026-SM-4WWB7 27.7
GTEX-11DXZ-0126-SM-5EGGY 27.5
GTEX-144GM-1326-SM-5LU5E 27.1
GTEX-U3ZN-0226-SM-3DB8D 22.0
GTEX-14C38-1526-SM-5RQJ7 21.6
GTEX-QDVN-0826-SM-48TZ2 21.6
GTEX-ZAB4-0826-SM-5LU9D 20.8
GTEX-12ZZZ-1326-SM-59HKW 15.5
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

59.3

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 59.3
FF:10018-101C9 64,69,70 years, mixed 59.3

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