Fields »
ABOUT
HELP
BLOG
BCAS2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:36.2TPM
GTEx:19.8RPKM
FANTOM5:48.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Low
Fibroblasts:Low
 
 

Antibody staining

Antibody HPA067881

  

Chondrocytes

 Low  

Fibroblasts

 Low  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA067881

  

Adipocytes

 Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

36.2
N/A Female, age 80
Sample 1
TPM: 40.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 33.3
N/A Female, age 57
Sample 3
TPM: 29.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 42.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 35.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

19.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 19.6
Samples: 350

Max RPKM: 40.7
Min RPKM: 10.9
Std RPKM: 3.6
Median RPKM: 18.9
GTEX-139D8-0326-SM-5IJCJ 40.7
GTEX-145LS-0226-SM-5O9A5 37.3
GTEX-13X6K-0226-SM-5QGPB 31.1
GTEX-Y3IK-2526-SM-4WWDM 30.0
GTEX-Y5V6-2526-SM-5IFJV 29.9
GTEX-11EMC-2826-SM-5PNY6 29.7
GTEX-TSE9-0226-SM-3DB84 29.3
GTEX-146FQ-0226-SM-5NQAL 28.2
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 20.0
Samples: 227

Max RPKM: 41.2
Min RPKM: 10.7
Std RPKM: 4.6
Median RPKM: 19.4
GTEX-12WSI-1526-SM-5GCNM 41.2
GTEX-ZE7O-1526-SM-5J1NH 41.0
GTEX-12ZZX-1726-SM-5BC63 39.0
GTEX-113JC-0726-SM-5GZZR 37.7
GTEX-13OVL-0826-SM-5L3GV 34.6
GTEX-13IVO-2426-SM-5K7V9 30.4
GTEX-13VXU-1026-SM-5KLZE 30.3
GTEX-ZTX8-0726-SM-59HL9 29.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

48.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 48.8
FF:10010-101C1 65,65,76 years, mixed 48.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.