We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PLEKHM2
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:39.4RPKM
FANTOM5:43.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:High
 

Antibody staining

Antibody HPA032304

 

Glial cells

Medium  

Neuronal cells

High  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

39.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 39.4
Samples: 117

Max RPKM: 82.4
Min RPKM: 17.2
Std RPKM: 9.4
Median RPKM: 40.6
GTEX-139TT-0011-R5b-SM-5K7W8 82.4
GTEX-T5JC-0011-R5A-SM-32PLK 56.2
GTEX-T6MN-0011-R5A-SM-32QPD 54.0
GTEX-13FLW-0011-R5a-SM-5LZX6 53.7
GTEX-X4XX-0011-R5A-SM-46MWN 52.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 52.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 52.0
GTEX-13JUV-0011-R5a-SM-5LZY5 52.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 51.8
GTEX-RVPV-0011-R5A-SM-2TF69 50.3
GTEX-N7MT-0011-R5a-SM-2I3G6 49.9
GTEX-RU72-0011-R5A-SM-2TF6U 49.6
GTEX-13G51-0011-R5a-SM-5L3EB 49.2
GTEX-12WSA-0011-R5b-SM-5GU5I 48.5
GTEX-13FLV-0011-R5a-SM-5LZWT 48.5
GTEX-13FXS-0011-R5b-SM-5LZYE 47.9
GTEX-13NYB-0011-R5a-SM-5MR45 47.1
GTEX-13NYS-0011-R5a-SM-5MR4D 47.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 47.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 46.9
GTEX-145LS-0011-R5a-SM-5SI65 46.6
GTEX-UTHO-0011-R5A-SM-3GIJD 46.6
GTEX-R55E-0011-R5A-SM-2TC5N 46.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 46.2
GTEX-14BIM-0011-R5b-SM-5S2RM 45.9
GTEX-13SLX-0011-R5a-SM-5O9BV 45.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 45.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 45.5
GTEX-13X6I-0011-R5a-SM-5PNWW 45.3
GTEX-145MH-0011-R5a-SM-5P9JT 45.2
GTEX-ZUA1-0011-R5b-SM-51MTG 44.7
GTEX-N7MS-0011-R5a-SM-2HMK8 44.6
GTEX-11OF3-0011-R5a-SM-57WB4 44.5
GTEX-13OW5-0011-R5b-SM-5L3FR 44.5
GTEX-144GO-0011-R5a-SM-5PNUR 44.4
GTEX-X585-0011-R5A-SM-46MVI 44.2
GTEX-11GSP-0011-R5a-SM-57WBE 43.8
GTEX-1399T-0011-R5b-SM-5IJDK 43.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 43.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 43.3
GTEX-131YS-0011-R5b-SM-5K7YB 43.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 43.0
GTEX-TSE9-0011-R5A-SM-3DB7J 42.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 42.8
GTEX-WVLH-0011-R5A-SM-3MJFW 42.7
GTEX-NL4W-0011-R5a-SM-2I3GD 42.6
GTEX-QVJO-0011-R5A-SM-2S1QM 42.5
GTEX-OHPN-0011-R5A-SM-2I5FF 42.4
GTEX-Z93S-0011-R5b-SM-4RGNI 42.4
GTEX-13CZV-0011-R5a-SM-5K7XA 42.2
GTEX-WL46-0011-R5A-SM-3LK6V 42.1
GTEX-13OW6-0011-R5a-SM-5O9BK 41.9
GTEX-13X6J-0011-R5b-SM-5PNWT 41.6
GTEX-13VXU-0011-R5a-SM-5O9D7 41.5
GTEX-11H98-0011-R5b-SM-57WCF 41.4
GTEX-14ABY-0011-R5b-SM-5SI7B 41.3
GTEX-12WSC-0011-R5b-SM-5CVNS 40.9
GTEX-1313W-0011-R5b-SM-5L3EP 40.7
GTEX-12WSB-0011-R5b-SM-5GU67 40.6
GTEX-132Q8-0011-R5a-SM-5IJDM 40.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 40.4
GTEX-13JVG-0011-R5a-SM-5MR4O 40.1
GTEX-NL3H-0011-R5a-SM-2I3GB 40.1
GTEX-RVPU-0011-R5A-SM-2XCAD 40.1
GTEX-WWYW-0011-R5A-SM-3NB3E 40.1
GTEX-13OVH-0011-R5b-SM-5KM4L 39.9
GTEX-S7SE-0011-R5A-SM-2XCDA 39.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 39.9
GTEX-WZTO-0011-R5B-SM-3NMC5 39.5
GTEX-13OVL-0011-R5b-SM-5L3FU 38.8
GTEX-11NV4-0011-R5a-SM-5NQ88 38.6
GTEX-13OW7-0011-R5b-SM-5O9DM 38.2
GTEX-12WSD-0011-R5b-SM-5CVNG 38.1
GTEX-ZE7O-0011-R5a-SM-57WBO 37.4
GTEX-XOTO-0011-R5A-SM-4B657 37.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 37.1
GTEX-13S7M-0011-R5b-SM-5P9HS 36.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 36.4
GTEX-XMD1-0011-R5A-SM-4AT47 36.2
GTEX-13X6K-0011-R5b-SM-5PNUE 35.8
GTEX-12WSH-0011-R5b-SM-5P9F3 35.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 35.1
GTEX-X261-0011-R5A-SM-3NMB4 34.9
GTEX-13O3O-0011-R5b-SM-5KM44 34.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 34.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 34.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 34.1
GTEX-ZXG5-0011-R5b-SM-57WBN 34.1
GTEX-12WSF-0011-R5a-SM-5HL8K 33.8
GTEX-NPJ7-0011-R5a-SM-33HBK 33.3
GTEX-11WQC-0011-R5a-SM-5BC74 31.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 31.5
GTEX-12ZZX-0011-R5a-SM-5HL89 31.4
GTEX-P44H-0011-R5A-SM-2XCEX 31.4
GTEX-139T8-0011-R5b-SM-5J1MO 31.2
GTEX-OXRN-0011-R5A-SM-2I5EF 31.2
GTEX-ZV68-0011-R5a-SM-4YCDW 31.2
GTEX-YJ89-0011-R5a-SM-4V6GM 31.1
GTEX-YFC4-0011-R5a-SM-4RGLR 30.2
GTEX-13CIG-0011-R5b-SM-5L3F2 30.1
GTEX-13FHP-0011-R5b-SM-5LZY2 28.6
GTEX-1445S-0011-R5a-SM-5PNUS 28.4
GTEX-11UD1-0011-R5b-SM-5P9FP 27.8
GTEX-PVOW-0011-R5A-SM-32PL7 27.7
GTEX-139TS-0011-R5b-SM-5J2MZ 26.4
GTEX-144GL-0011-R5b-SM-5PNUJ 25.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 25.5
GTEX-14BIN-0011-R5b-SM-5SI78 25.4
GTEX-ZVT3-0011-R5a-SM-51MSI 23.9
GTEX-13112-0011-R5b-SM-5DUV8 23.0
GTEX-QMR6-0011-R5A-SM-32PKT 23.0
GTEX-S7PM-0011-R5A-SM-3NM8G 22.0
GTEX-13CF2-0011-R5a-SM-5LZWS 21.3
GTEX-1477Z-0011-R5b-SM-5PNUO 20.2
GTEX-145MG-0011-R5b-SM-5S2VU 19.7
GTEX-T2IS-0011-R5A-SM-32QP4 17.3
GTEX-13NZA-0011-R5b-SM-5KM4K 17.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

43.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 43.3
FF:10164-103B2 76 years, female 56.2
FF:10379-105H1 89 years, female 30.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.