We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PLEKHM2
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:4.2TPM
GTEx:9.4RPKM
FANTOM5:11.5Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Low
Hepatocytes:High
 

Antibody staining

Antibody HPA032304

 

Bile duct cells

Low  

Hepatocytes

High  
 
 
 

LIVER - HPA RNA-seq

Average TPM

4.2

N/A Female, age 60
Sample 1
TPM: 5.4
overview Male, age 54
Sample 2
TPM: 7.9
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 4.8
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 1.3
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 1.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 5.0
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 3.8
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 4.7
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 3.1
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 4.8
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

9.4

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 9.4
Samples: 119

Max RPKM: 19.4
Min RPKM: 4.5
Std RPKM: 2.8
Median RPKM: 8.7
GTEX-13N11-0926-SM-5IJG2 19.4
GTEX-12WSG-0626-SM-5FQTQ 18.6
GTEX-1497J-0726-SM-5Q5D1 18.3
GTEX-UTHO-2426-SM-4JBHD 17.8
GTEX-ZAB4-0826-SM-5LU9D 16.5
GTEX-14C38-1526-SM-5RQJ7 15.7
GTEX-13NZ9-1326-SM-5MR3V 15.2
GTEX-QDVN-0826-SM-48TZ2 14.3
GTEX-X4XY-1626-SM-46MVN 14.3
GTEX-S32W-1926-SM-4AD63 14.2
GTEX-ZTPG-1426-SM-51MT3 13.6
GTEX-UPIC-0926-SM-4IHLV 13.4
GTEX-Q734-0326-SM-48U15 13.2
GTEX-131XE-0326-SM-5LZVO 13.0
GTEX-139YR-0226-SM-5IFEM 13.0
GTEX-YB5E-0326-SM-5IFHU 12.9
GTEX-S33H-1626-SM-4AD68 12.6
GTEX-QEL4-1226-SM-447A4 12.2
GTEX-WYVS-1926-SM-4PQZ2 11.7
GTEX-XBEC-1526-SM-4AT68 11.7
GTEX-13113-1326-SM-5GCOI 11.4
GTEX-146FH-1526-SM-5NQBU 11.3
GTEX-WQUQ-1926-SM-4OOSA 11.3
GTEX-ZVT4-0626-SM-5E45T 10.8
GTEX-12KS4-1326-SM-5LUB3 10.7
GTEX-RU72-1426-SM-46MUF 10.7
GTEX-X261-1726-SM-4PQYT 10.7
GTEX-ZYY3-0626-SM-5NQ6W 10.6
GTEX-13FTW-1126-SM-5J2NV 10.2
GTEX-13NYB-1026-SM-5IFH3 10.2
GTEX-R53T-0326-SM-48FEC 10.2
GTEX-X4EP-1026-SM-4QAS5 10.2
GTEX-144GM-1326-SM-5LU5E 10.1
GTEX-11EQ9-0526-SM-5A5JZ 10.0
GTEX-13N2G-0926-SM-5IFGJ 9.9
GTEX-OOBJ-0826-SM-3NB2K 9.9
GTEX-12WSI-0226-SM-5GCNA 9.8
GTEX-PX3G-0826-SM-48TZS 9.8
GTEX-Q2AG-1126-SM-48U1P 9.8
GTEX-UPK5-1426-SM-4JBHH 9.8
GTEX-X4EO-1126-SM-4QARQ 9.7
GTEX-ZVP2-0626-SM-51MSO 9.7
GTEX-12WSL-0226-SM-5CVMJ 9.6
GTEX-WFON-1726-SM-4LVMQ 9.5
GTEX-139TS-1426-SM-5IFJD 9.4
GTEX-ZF29-2026-SM-4WWB7 9.4
GTEX-13NZB-0626-SM-5IFH6 9.3
GTEX-13QJC-0726-SM-5RQJK 9.2
GTEX-13SLX-1226-SM-5S2Q6 9.2
GTEX-REY6-1226-SM-48FDR 9.2
GTEX-ZVT3-1626-SM-5GU66 9.2
GTEX-QEG4-1826-SM-4R1JN 9.1
GTEX-RN64-1826-SM-48FDV 9.1
GTEX-RTLS-1326-SM-46MUN 9.1
GTEX-S4Z8-0526-SM-4AD4T 9.0
GTEX-P78B-1326-SM-3P611 8.9
GTEX-VUSG-0126-SM-4KL1X 8.9
GTEX-QESD-2026-SM-447BI 8.8
GTEX-Y5LM-0426-SM-4VBRO 8.8
GTEX-139TU-0826-SM-5IJFG 8.7
GTEX-14AS3-0126-SM-5Q5F4 8.7
GTEX-RNOR-1426-SM-48FDJ 8.7
GTEX-T6MN-1226-SM-3NMA5 8.7
GTEX-YEC4-0826-SM-5P9FV 8.7
GTEX-ZAB5-0426-SM-5CVMI 8.7
GTEX-13O3O-1826-SM-5IFGW 8.6
GTEX-RWSA-1426-SM-47JXA 8.6
GTEX-11WQC-0726-SM-5EQMR 8.5
GTEX-11DXZ-0126-SM-5EGGY 8.4
GTEX-1269C-0626-SM-5FQSS 8.4
GTEX-147F4-1426-SM-5LUA8 8.4
GTEX-1399R-1226-SM-5P9GF 8.3
GTEX-131XH-0626-SM-5LZWH 8.2
GTEX-11GSP-0626-SM-5986T 8.1
GTEX-14A5I-1726-SM-5QGQ5 8.1
GTEX-RM2N-1926-SM-48FCU 8.1
GTEX-WZTO-0626-SM-4PQYY 8.1
GTEX-YFC4-1526-SM-5IFJS 8.1
GTEX-12696-0826-SM-5EGGE 8.0
GTEX-QV44-0326-SM-4R1KD 8.0
GTEX-1399T-0826-SM-5IFES 7.9
GTEX-13FLV-0326-SM-5N9DJ 7.8
GTEX-11ZUS-2526-SM-59872 7.7
GTEX-12WSM-0726-SM-5GCOW 7.7
GTEX-ZZPU-0426-SM-5GZYH 7.7
GTEX-11NV4-1326-SM-5HL6V 7.6
GTEX-11ZVC-0726-SM-5FQT9 7.6
GTEX-13112-1426-SM-5EGH8 7.6
GTEX-145LU-1326-SM-5LU9N 7.6
GTEX-145MO-2326-SM-5NQ9K 7.6
GTEX-TKQ2-1726-SM-4DXUP 7.4
GTEX-13FTZ-0726-SM-5IFFY 7.3
GTEX-145MF-0826-SM-5QGQA 7.3
GTEX-131YS-1626-SM-5HL6C 7.2
GTEX-132NY-0926-SM-5P9G3 7.2
GTEX-XOTO-0826-SM-4B65O 7.2
GTEX-YECK-1926-SM-4W21H 7.2
GTEX-ZF2S-3026-SM-4WWCH 7.2
GTEX-ZYT6-0626-SM-5E45V 7.2
GTEX-11DXY-0526-SM-5EGGQ 7.1
GTEX-SJXC-1226-SM-4DM78 7.1
GTEX-X3Y1-2726-SM-4PQZH 7.1
GTEX-11OF3-0726-SM-5BC4Z 7.0
GTEX-13PVR-0126-SM-5S2PY 7.0
GTEX-13OW6-2626-SM-5IFF2 6.9
GTEX-Y5V5-0926-SM-4VBPZ 6.8
GTEX-11ZTS-1426-SM-5EQMM 6.7
GTEX-12WSD-1426-SM-5GCN9 6.7
GTEX-ZPU1-0826-SM-57WG2 6.7
GTEX-Z9EW-0426-SM-5CVM9 6.6
GTEX-14DAQ-1726-SM-5S2R2 6.5
GTEX-14E1K-0326-SM-5S2PE 6.5
GTEX-13VXU-0926-SM-5IFFH 6.4
GTEX-11NUK-1226-SM-5P9GM 6.1
GTEX-1212Z-0226-SM-59HLF 5.9
GTEX-147JS-1126-SM-5RQIW 5.3
GTEX-12ZZZ-1326-SM-59HKW 5.0
GTEX-14753-1626-SM-5NQ9L 4.8
GTEX-U3ZN-0226-SM-3DB8D 4.5
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

11.5

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 11.5
FF:10018-101C9 64,69,70 years, mixed 11.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.