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ABCD3
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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:42.3TPM
GTEx:7.2RPKM
FANTOM5:17.0Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA032026

 

Antibody HPA032027

 

Antibody CAB032516

 

Antibody CAB075749

 

Adipocytes

Not detected   Medium   Not detected   Medium  

Glandular cells

Medium   Medium   Medium   High  

Myoepithelial cells

Medium   Medium   Medium   Not detected  
       
       
       

BREAST - HPA RNA-seq

Average TPM

42.3

overview Female, age 52
Sample 1
TPM: 23.3
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 40.8
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 78.3
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 26.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

7.2

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 7.2
Samples: 214

Max RPKM: 26.3
Min RPKM: 3.3
Std RPKM: 2.9
Median RPKM: 6.4
GTEX-R55F-1726-SM-2TF4R 26.3
GTEX-T6MN-0726-SM-32PML 18.6
GTEX-QEL4-2126-SM-447AE 17.0
GTEX-14ABY-2126-SM-5QGQZ 15.0
GTEX-ZU9S-1926-SM-5NQBP 14.0
GTEX-T5JC-2126-SM-32PMO 13.9
GTEX-VUSG-2226-SM-4KKZO 13.9
GTEX-11PRG-0826-SM-5EQ6A 13.2
GTEX-13OW5-2226-SM-5L3HC 13.2
GTEX-U3ZH-1426-SM-4DXSR 13.2
GTEX-ZTTD-1026-SM-51MRD 13.1
GTEX-111YS-1926-SM-5GICC 12.9
GTEX-13NZB-2126-SM-5MR4Y 12.5
GTEX-SIU7-1626-SM-4BRUK 12.2
GTEX-13N11-1726-SM-5J1OJ 12.1
GTEX-U412-1826-SM-4DXTJ 11.8
GTEX-ZVTK-0326-SM-51MRR 11.8
GTEX-ZY6K-1626-SM-5GZWV 11.7
GTEX-11EMC-2026-SM-5A5JV 11.2
GTEX-11GS4-2126-SM-5A5KR 11.2
GTEX-T5JW-2026-SM-4DM63 11.2
GTEX-ZVT2-1826-SM-5NQ8W 11.0
GTEX-145LT-0726-SM-5S2VM 10.9
GTEX-YFC4-1426-SM-5IFJG 10.7
GTEX-ZF2S-2026-SM-5E461 10.6
GTEX-QEG5-0726-SM-4R1JQ 10.4
GTEX-13CF2-2026-SM-5K7VI 10.3
GTEX-VJWN-0726-SM-3GIJ8 10.2
GTEX-ZXES-0826-SM-5E43C 10.2
GTEX-W5X1-2326-SM-3GIL6 10.0
GTEX-ZV7C-1826-SM-5NQ83 10.0
GTEX-S341-1526-SM-4AD6K 9.8
GTEX-11DXW-0626-SM-5N9ER 9.7
GTEX-11P7K-0726-SM-5EGKX 9.7
GTEX-13FTY-2226-SM-5J1ND 9.5
GTEX-147F4-2826-SM-5NQBN 9.5
GTEX-ZTX8-1226-SM-4YCE9 9.5
GTEX-UPK5-2326-SM-3P5Z8 9.4
GTEX-WYJK-1326-SM-3NB2T 9.4
GTEX-XBED-1626-SM-47JYN 9.4
GTEX-ZF29-1926-SM-5S2P1 9.3
GTEX-13QIC-2326-SM-5LU5N 9.2
GTEX-TML8-1226-SM-32QON 9.2
GTEX-WYBS-0926-SM-3NM94 9.2
GTEX-Y111-2026-SM-4SOJA 9.2
GTEX-WYVS-1726-SM-3NMAY 8.7
GTEX-WY7C-2726-SM-3NB3P 8.5
GTEX-XOT4-0726-SM-4GIAW 8.5
GTEX-Y3IK-2326-SM-4WWDT 8.5
GTEX-XUZC-1626-SM-4BRVP 8.4
GTEX-Y8LW-1626-SM-5IFHX 8.4
GTEX-145MO-0826-SM-5NQBL 8.3
GTEX-139TU-0626-SM-5KM3X 8.2
GTEX-TMMY-0726-SM-33HBE 8.2
GTEX-12ZZX-1126-SM-5EGKB 8.1
GTEX-11TT1-2126-SM-5GU5Y 7.8
GTEX-11WQC-1726-SM-5GU4W 7.8
GTEX-1192X-2326-SM-5987X 7.6
GTEX-146FH-0826-SM-5SI8T 7.6
GTEX-QDT8-0626-SM-48TYW 7.6
GTEX-Y5LM-1726-SM-4VDSX 7.6
GTEX-11EI6-0626-SM-5985T 7.4
GTEX-13W3W-1226-SM-5LU4H 7.4
GTEX-WRHU-0326-SM-3MJFY 7.4
GTEX-XYKS-1326-SM-4BRUN 7.3
GTEX-YB5K-1626-SM-5IFIN 7.3
GTEX-11P81-1926-SM-5BC53 7.2
GTEX-1314G-1226-SM-5BC6D 7.2
GTEX-13FHO-0826-SM-5L3E8 7.2
GTEX-WOFL-0826-SM-3MJG1 7.2
GTEX-ZF3C-2326-SM-5S2MZ 7.2
GTEX-Q2AG-0326-SM-48U1O 7.1
GTEX-T2IS-1526-SM-32QPR 7.1
GTEX-WXYG-2226-SM-4E3IM 7.1
GTEX-ZPIC-1126-SM-5BC7F 7.1
GTEX-ZYFC-0826-SM-5E44K 7.1
GTEX-11EM3-1326-SM-5N9C6 7.0
GTEX-X15G-1626-SM-3NMB3 7.0
GTEX-ZYWO-2326-SM-5GZY4 7.0
GTEX-1117F-2826-SM-5GZXL 6.9
GTEX-13O3O-0826-SM-5K7WE 6.9
GTEX-RU72-0626-SM-46MUI 6.9
GTEX-XUJ4-1926-SM-4BOOV 6.9
GTEX-ZLV1-1426-SM-4WWES 6.9
GTEX-S4UY-0726-SM-4AD6X 6.8
GTEX-Y114-2026-SM-4TT7L 6.8
GTEX-1122O-1226-SM-5H113 6.7
GTEX-11LCK-2426-SM-5HL5F 6.7
GTEX-131YS-0626-SM-5EGKL 6.7
GTEX-145MN-1926-SM-5SIAI 6.7
GTEX-ZVE2-1226-SM-5NQ8R 6.7
GTEX-ZZPU-0626-SM-5E43T 6.7
GTEX-11ZTT-2326-SM-5EQLG 6.6
GTEX-1211K-1926-SM-5EQLB 6.6
GTEX-S33H-0326-SM-4AD6N 6.6
GTEX-T6MO-0326-SM-32QOK 6.6
GTEX-TKQ2-1826-SM-33HB2 6.6
GTEX-13FTX-1126-SM-5N9EN 6.5
GTEX-145ME-1526-SM-5Q5F2 6.5
GTEX-SE5C-2126-SM-4BRUJ 6.5
GTEX-TKQ1-0226-SM-33HB5 6.5
GTEX-Y3I4-1526-SM-4TT7K 6.5
GTEX-ZDTT-2126-SM-5S2OJ 6.5
GTEX-ZVT4-1026-SM-57WC4 6.5
GTEX-ZVZQ-0826-SM-51MRF 6.5
GTEX-132Q8-1426-SM-5EGK7 6.4
GTEX-13O3P-0826-SM-5L3DH 6.4
GTEX-RWS6-1926-SM-47JXY 6.4
GTEX-YJ8O-2226-SM-5IFHW 6.4
GTEX-11I78-2226-SM-5PNYA 6.3
GTEX-13O61-1826-SM-5KM4I 6.3
GTEX-14AS3-1626-SM-5S2OY 6.3
GTEX-WFON-1826-SM-3GILG 6.3
GTEX-13113-1726-SM-5GCOO 6.2
GTEX-13NZ9-1026-SM-5MR5K 6.2
GTEX-R53T-1526-SM-48FEK 6.2
GTEX-XV7Q-2326-SM-4BRVZ 6.2
GTEX-ZC5H-2626-SM-5J2MG 6.2
GTEX-13NZ8-0126-SM-5IJCT 6.1
GTEX-T2YK-2226-SM-32QPT 6.1
GTEX-Y5V5-2126-SM-4WWFO 6.1
GTEX-117XS-1926-SM-5GICO 6.0
GTEX-1313W-0826-SM-5EQ4T 6.0
GTEX-139T8-0826-SM-5L3DE 6.0
GTEX-UJHI-1426-SM-3DB9C 6.0
GTEX-XMD1-0826-SM-4AT52 6.0
GTEX-XQ8I-2426-SM-4WAXY 6.0
GTEX-YEC3-1026-SM-5IFI5 6.0
GTEX-ZEX8-2226-SM-57WC6 6.0
GTEX-ZV6S-1826-SM-5NQ8D 6.0
GTEX-12WSK-2226-SM-5GCO5 5.9
GTEX-1399U-1826-SM-5PNZ1 5.9
GTEX-14E6E-1326-SM-5S2NR 5.9
GTEX-ZUA1-1526-SM-59HLS 5.9
GTEX-11O72-2126-SM-5N9FO 5.8
GTEX-12WSM-1726-SM-5BC6J 5.8
GTEX-144GL-2026-SM-5LU3O 5.8
GTEX-Y8E4-1626-SM-5S2MW 5.8
GTEX-11WQK-2426-SM-5GU5C 5.7
GTEX-13PL6-2926-SM-5L3I2 5.7
GTEX-Y9LG-1426-SM-5IFJZ 5.7
GTEX-ZYT6-0126-SM-5E45J 5.7
GTEX-11DXY-2326-SM-5GICW 5.6
GTEX-133LE-1726-SM-5K7VQ 5.6
GTEX-13FTW-1426-SM-5LZWZ 5.6
GTEX-S4P3-1326-SM-4AD6V 5.6
GTEX-X4EP-2926-SM-3P5YQ 5.6
GTEX-Y5V6-2126-SM-4WWFX 5.6
GTEX-11EQ9-1826-SM-5Q5AJ 5.5
GTEX-R3RS-0626-SM-48FE1 5.5
GTEX-S4Q7-1126-SM-4AD6R 5.5
GTEX-U3ZN-1926-SM-4DXSG 5.5
GTEX-X261-0626-SM-3NMD9 5.5
GTEX-YFCO-1826-SM-4W1YH 5.5
GTEX-ZDXO-0126-SM-5S2ND 5.5
GTEX-11DXZ-1926-SM-5GZZL 5.4
GTEX-11DZ1-0326-SM-5N9BN 5.4
GTEX-11ONC-2126-SM-5HL6E 5.4
GTEX-1269C-2426-SM-5FQSN 5.4
GTEX-132NY-0826-SM-5K7Y7 5.4
GTEX-13D11-1026-SM-5IJFB 5.4
GTEX-13S86-1226-SM-5S2OA 5.4
GTEX-ZQG8-0726-SM-5P9H9 5.4
GTEX-12WSN-1326-SM-5GCNT 5.3
GTEX-13OW8-0226-SM-5K7UP 5.3
GTEX-XUW1-2326-SM-4BOO5 5.3
GTEX-ZWKS-2826-SM-5NQ74 5.3
GTEX-11NV4-2026-SM-5N9DG 5.2
GTEX-14753-2426-SM-5LU8U 5.2
GTEX-RUSQ-2026-SM-4GIAK 5.2
GTEX-S32W-2026-SM-4AD6E 5.2
GTEX-ZA64-1526-SM-5CVMD 5.2
GTEX-ZDYS-1126-SM-5K7UB 5.2
GTEX-12WSB-0626-SM-59HJO 5.1
GTEX-131XW-0726-SM-5EGK3 5.1
GTEX-13CF3-2126-SM-5IFJP 5.1
GTEX-117YX-1426-SM-5H12H 5.0
GTEX-QMRM-1626-SM-4R1KV 5.0
GTEX-XGQ4-0926-SM-4AT4U 5.0
GTEX-11NSD-0926-SM-5N9DR 4.9
GTEX-139T6-1626-SM-5PNYZ 4.9
GTEX-UTHO-1026-SM-3GAF7 4.9
GTEX-ZQUD-1926-SM-51MSA 4.9
GTEX-11TUW-1826-SM-5BC5D 4.8
GTEX-ZZ64-1226-SM-5E43R 4.8
GTEX-11ZUS-0826-SM-5FQUY 4.7
GTEX-WI4N-1426-SM-3LK7H 4.7
GTEX-XQ3S-1326-SM-4BOPQ 4.7
GTEX-ZAJG-0626-SM-5HL8X 4.7
GTEX-11GSO-1926-SM-5A5K3 4.6
GTEX-13N1W-0626-SM-5MR4U 4.6
GTEX-X4XY-0926-SM-4E3JD 4.6
GTEX-ZT9W-2026-SM-51MRA 4.6
GTEX-132AR-0826-SM-5EGK6 4.5
GTEX-QVJO-1826-SM-447C9 4.5
GTEX-R55D-0826-SM-48FEA 4.5
GTEX-REY6-2426-SM-48FF5 4.5
GTEX-YB5E-1726-SM-5IFJ3 4.5
GTEX-12BJ1-1826-SM-5HL9N 4.4
GTEX-PSDG-1626-SM-48TCQ 4.4
GTEX-XMK1-1126-SM-4IHJ8 4.4
GTEX-12KS4-0126-SM-5Q5A5 4.3
GTEX-144GM-0926-SM-5O994 4.3
GTEX-11P82-1326-SM-5HL62 4.2
GTEX-ZAB4-2526-SM-5HL8M 4.1
GTEX-ZLFU-2126-SM-4WWEV 4.1
GTEX-S7SE-0826-SM-4AT4D 4.0
GTEX-13O3Q-2226-SM-5KM4O 3.9
GTEX-U8XE-0826-SM-4E3J1 3.9
GTEX-11OF3-1926-SM-59889 3.8
GTEX-XMD2-0926-SM-4WWEF 3.8
GTEX-ZYW4-0826-SM-5GIDG 3.7
GTEX-13W46-0826-SM-5LU3H 3.6
GTEX-13PVQ-1026-SM-5KM3M 3.3
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

17.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 17.0
FF:10080-102A8 77 years, female 17.0

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