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STX12

GENERAL INFORMATION

Gene name

 STX12

Gene description

 Syntaxin 12

Protein class

 Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

 Intracellular,Membrane

Number of transcripts

 2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 General cytoplasmic expression.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data.

Reliability score

 Approved based on 1 antibody.
HPA041038
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Thyroid gland

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 STX12 (HGNC Symbol)

Synonyms

 STX13, STX14

Description

 Syntaxin 12 (HGNC Symbol)

Entrez gene summary

Chromosome

 1

Cytoband

 p35.3

Chromosome location (bp)

 27773183 - 27824452

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000117758 (version 83.38)

Entrez gene

 23673

UniProt

 Q86Y82 (UniProt - Evidence at protein level)

neXtProt

 NX_Q86Y82

Antibodypedia

 STX12 antibodies

PROTEIN BROWSER
STX12-001
STX12-002

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
STX12-001
ENSP00000363054
ENST00000373943
Q86Y82 [Direct mapping]
Syntaxin-12
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Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0000149 [SNARE binding]
GO:0005484 [SNAP receptor activity]
GO:0005515 [protein binding]
GO:0006886 [intracellular protein transport]
GO:0006906 [vesicle fusion]
GO:0010008 [endosome membrane]
GO:0012505 [endomembrane system]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016192 [vesicle-mediated transport]
GO:0031083 [BLOC-1 complex]
GO:0031201 [SNARE complex]
GO:0033344 [cholesterol efflux]
GO:0045121 [membrane raft]
GO:0045335 [phagocytic vesicle]
GO:0048278 [vesicle docking]
GO:0050821 [protein stabilization]
GO:0070062 [extracellular exosome]
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 276 aa
31.6 kDa 		No 1
STX12-002
ENSP00000392577
ENST00000440806
B1AJQ6 [Direct mapping]
Syntaxin-12
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000149 [SNARE binding]
GO:0005484 [SNAP receptor activity]
GO:0005622 [intracellular]
GO:0006886 [intracellular protein transport]
GO:0006906 [vesicle fusion]
GO:0012505 [endomembrane system]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016192 [vesicle-mediated transport]
GO:0048278 [vesicle docking]
Show all
 215 aa
24.6 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.