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RCN2
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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:25.5RPKM
FANTOM5:210.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:High
 

Antibody staining

Antibody HPA030694

 

Antibody HPA030695

 

Glial cells

Not detected   Low  

Neuronal cells

High   High  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

25.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 25.5
Samples: 117

Max RPKM: 81.9
Min RPKM: 8.3
Std RPKM: 9.3
Median RPKM: 24.9
GTEX-T2IS-0011-R5A-SM-32QP4 81.9
GTEX-PVOW-0011-R5A-SM-32PL7 48.5
GTEX-P44H-0011-R5A-SM-2XCEX 45.6
GTEX-UTHO-0011-R5A-SM-3GIJD 43.7
GTEX-131YS-0011-R5b-SM-5K7YB 40.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 39.7
GTEX-12WSB-0011-R5b-SM-5GU67 38.8
GTEX-13G51-0011-R5a-SM-5L3EB 38.6
GTEX-T6MN-0011-R5A-SM-32QPD 37.6
GTEX-139TT-0011-R5b-SM-5K7W8 36.0
GTEX-12WSC-0011-R5b-SM-5CVNS 35.8
GTEX-ZUA1-0011-R5b-SM-51MTG 35.8
GTEX-WVLH-0011-R5A-SM-3MJFW 34.7
GTEX-QVJO-0011-R5A-SM-2S1QM 34.6
GTEX-WWYW-0011-R5A-SM-3NB3E 34.1
GTEX-1399T-0011-R5b-SM-5IJDK 33.9
GTEX-WZTO-0011-R5B-SM-3NMC5 33.8
GTEX-12WSF-0011-R5a-SM-5HL8K 33.7
GTEX-X585-0011-R5A-SM-46MVI 33.6
GTEX-12WSA-0011-R5b-SM-5GU5I 33.1
GTEX-1313W-0011-R5b-SM-5L3EP 32.8
GTEX-145LS-0011-R5a-SM-5SI65 31.8
GTEX-14BIM-0011-R5b-SM-5S2RM 31.4
GTEX-13OW6-0011-R5a-SM-5O9BK 31.3
GTEX-QMR6-0011-R5A-SM-32PKT 31.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 30.6
GTEX-Z93S-0011-R5b-SM-4RGNI 30.6
GTEX-S7SE-0011-R5A-SM-2XCDA 29.9
GTEX-XMD1-0011-R5A-SM-4AT47 29.9
GTEX-11OF3-0011-R5a-SM-57WB4 29.3
GTEX-13X6J-0011-R5b-SM-5PNWT 29.3
GTEX-14ABY-0011-R5b-SM-5SI7B 29.0
GTEX-13X6I-0011-R5a-SM-5PNWW 28.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 28.6
GTEX-WL46-0011-R5A-SM-3LK6V 28.3
GTEX-11H98-0011-R5b-SM-57WCF 28.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 28.1
GTEX-132Q8-0011-R5a-SM-5IJDM 28.0
GTEX-13VXU-0011-R5a-SM-5O9D7 27.9
GTEX-T5JC-0011-R5A-SM-32PLK 27.9
GTEX-N7MT-0011-R5a-SM-2I3G6 27.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 27.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 27.2
GTEX-13FLV-0011-R5a-SM-5LZWT 27.1
GTEX-11WQC-0011-R5a-SM-5BC74 26.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 26.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 26.5
GTEX-X261-0011-R5A-SM-3NMB4 26.3
GTEX-13X6K-0011-R5b-SM-5PNUE 26.2
GTEX-RU72-0011-R5A-SM-2TF6U 26.0
GTEX-N7MS-0011-R5a-SM-2HMK8 25.9
GTEX-13O3O-0011-R5b-SM-5KM44 25.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 25.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 25.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 25.2
GTEX-R55E-0011-R5A-SM-2TC5N 25.1
GTEX-11NV4-0011-R5a-SM-5NQ88 25.0
GTEX-13CZV-0011-R5a-SM-5K7XA 25.0
GTEX-12ZZX-0011-R5a-SM-5HL89 24.9
GTEX-11GSP-0011-R5a-SM-57WBE 24.8
GTEX-144GO-0011-R5a-SM-5PNUR 24.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 24.7
GTEX-13FXS-0011-R5b-SM-5LZYE 24.7
GTEX-145MH-0011-R5a-SM-5P9JT 24.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 24.6
GTEX-13SLX-0011-R5a-SM-5O9BV 24.4
GTEX-13FLW-0011-R5a-SM-5LZX6 24.3
GTEX-13OVL-0011-R5b-SM-5L3FU 24.3
GTEX-13NYB-0011-R5a-SM-5MR45 23.8
GTEX-13JUV-0011-R5a-SM-5LZY5 23.4
GTEX-RVPU-0011-R5A-SM-2XCAD 23.4
GTEX-TSE9-0011-R5A-SM-3DB7J 23.1
GTEX-13OW7-0011-R5b-SM-5O9DM 22.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 22.5
GTEX-139TS-0011-R5b-SM-5J2MZ 22.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 22.3
GTEX-YFC4-0011-R5a-SM-4RGLR 21.8
GTEX-ZE7O-0011-R5a-SM-57WBO 21.8
GTEX-12WSD-0011-R5b-SM-5CVNG 21.6
GTEX-13JVG-0011-R5a-SM-5MR4O 21.5
GTEX-13S7M-0011-R5b-SM-5P9HS 21.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 21.3
GTEX-14BIN-0011-R5b-SM-5SI78 21.2
GTEX-NPJ7-0011-R5a-SM-33HBK 21.1
GTEX-X4XX-0011-R5A-SM-46MWN 21.0
GTEX-13OVH-0011-R5b-SM-5KM4L 20.7
GTEX-13OW5-0011-R5b-SM-5L3FR 20.5
GTEX-13CIG-0011-R5b-SM-5L3F2 20.2
GTEX-1445S-0011-R5a-SM-5PNUS 19.5
GTEX-RVPV-0011-R5A-SM-2TF69 19.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 19.3
GTEX-13NYS-0011-R5a-SM-5MR4D 18.9
GTEX-ZXG5-0011-R5b-SM-57WBN 18.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 18.1
GTEX-ZV68-0011-R5a-SM-4YCDW 17.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 17.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 16.5
GTEX-NL4W-0011-R5a-SM-2I3GD 16.5
GTEX-XOTO-0011-R5A-SM-4B657 16.5
GTEX-OHPN-0011-R5A-SM-2I5FF 16.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 15.9
GTEX-139T8-0011-R5b-SM-5J1MO 15.8
GTEX-ZVT3-0011-R5a-SM-51MSI 15.8
GTEX-144GL-0011-R5b-SM-5PNUJ 15.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 15.4
GTEX-NL3H-0011-R5a-SM-2I3GB 14.4
GTEX-YJ89-0011-R5a-SM-4V6GM 14.4
GTEX-13112-0011-R5b-SM-5DUV8 13.9
GTEX-S7PM-0011-R5A-SM-3NM8G 13.6
GTEX-11UD1-0011-R5b-SM-5P9FP 13.5
GTEX-OXRN-0011-R5A-SM-2I5EF 13.3
GTEX-12WSH-0011-R5b-SM-5P9F3 12.6
GTEX-1477Z-0011-R5b-SM-5PNUO 12.2
GTEX-13FHP-0011-R5b-SM-5LZY2 11.2
GTEX-13CF2-0011-R5a-SM-5LZWS 10.7
GTEX-145MG-0011-R5b-SM-5S2VU 10.4
GTEX-13NZA-0011-R5b-SM-5KM4K 8.3
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

210.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 210.0
FF:10379-105H1 89 years, female 240.7
FF:10164-103B2 76 years, female 179.3

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