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RCN2
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    TISSUE

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    CELL

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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:99.9TPM
GTEx:24.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Medium
Neuronal cells:High
Neuropil:Low
 

Antibody staining

Antibody HPA030694

 

Antibody HPA030695

 

Endothelial cells

Not detected   Not detected  

Glial cells

Low   Medium  

Neuronal cells

High   High  

Neuropil

Low   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

99.9

N/A Male, age 5
Sample 1
TPM: 106.2
overview Female, age 40
Sample 2
TPM: 90.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 103.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

24.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 21.1
Samples: 114

Max RPKM: 37.7
Min RPKM: 10.6
Std RPKM: 5.1
Median RPKM: 21
GTEX-PVOW-2526-SM-2XCF7 37.7
GTEX-QMR6-1426-SM-32PLA 35.6
GTEX-TSE9-3026-SM-3DB76 34.0
GTEX-WZTO-2926-SM-3NM9I 31.6
GTEX-UTHO-3026-SM-3GAFB 31.1
GTEX-ZAK1-3026-SM-5S2MJ 29.8
GTEX-T2IS-3026-SM-32QPM 29.4
GTEX-QDT8-2926-SM-32PKC 29.2
GTEX-13FHO-3026-SM-5J1O9 29.1
GTEX-11NUK-2926-SM-5A5MD 28.4
GTEX-13NYC-2826-SM-5K7WR 28.0
GTEX-WVLH-3026-SM-3MJG9 27.6
GTEX-XLM4-3026-SM-4AT6L 27.3
GTEX-12ZZX-2926-SM-5GCOQ 26.7
GTEX-14BMV-3026-SM-5S2PQ 26.4
GTEX-Z93S-2926-SM-57WB9 26.4
GTEX-12ZZZ-3026-SM-5BC67 26.2
GTEX-T5JC-2426-SM-3NMDB 26.1
GTEX-13PL6-3126-SM-5LUAR 25.5
GTEX-X585-3026-SM-46MWF 25.5
GTEX-131YS-3126-SM-5KLYT 25.1
GTEX-WHSE-3026-SM-3P5ZH 25.1
GTEX-11DXY-3226-SM-5GIDE 24.5
GTEX-14ASI-3026-SM-5S2PN 24.5
GTEX-13VXU-2926-SM-5LU5C 24.3
GTEX-WWYW-3126-SM-3NB39 24.0
GTEX-13X6K-2926-SM-5Q5D5 23.9
GTEX-13OW6-3026-SM-5J2MI 23.7
GTEX-ZUA1-3026-SM-59HJC 23.7
GTEX-ZYFD-3026-SM-5E44C 23.7
GTEX-11WQK-3026-SM-5EQL6 23.6
GTEX-X4XX-3026-SM-3NMB2 23.5
GTEX-11PRG-2926-SM-5987A 23.1
GTEX-13NYB-3026-SM-5IJD7 23.1
GTEX-13FLW-1426-SM-5K7YE 23.0
GTEX-145LS-3126-SM-5Q5BY 23.0
GTEX-RU72-3026-SM-5SI7Y 23.0
GTEX-13OVH-3026-SM-5MR4N 22.9
GTEX-Y8DK-0826-SM-4TT3T 22.9
GTEX-13X6J-3026-SM-5Q5CU 22.8
GTEX-145MH-3026-SM-5Q5DZ 22.8
GTEX-QVJO-1426-SM-2S1QY 22.7
GTEX-QVUS-2826-SM-3GADB 22.7
GTEX-YFC4-3126-SM-5PNV6 22.6
GTEX-145MG-3026-SM-5RQJA 22.4
GTEX-111FC-3126-SM-5GZZ2 22.2
GTEX-117XS-3026-SM-5N9CA 22.0
GTEX-11ZUS-2926-SM-5FQSL 21.8
GTEX-ZE7O-3126-SM-5HL5X 21.8
GTEX-13SLX-3126-SM-5S2Q5 21.7
GTEX-WL46-2926-SM-3LK82 21.7
GTEX-RNOR-2326-SM-2TF4I 21.6
GTEX-1192X-3126-SM-5N9BY 21.3
GTEX-13FXS-3126-SM-5J2NN 21.2
GTEX-13OW8-2826-SM-5L3GC 21.2
GTEX-144GL-3026-SM-5Q5CW 21.1
GTEX-14A5I-2926-SM-5Q5CQ 21.1
GTEX-T6MN-2626-SM-32PMQ 21.0
GTEX-11DXW-1126-SM-5H12Q 20.9
GTEX-1128S-2726-SM-5H12C 20.7
GTEX-11OF3-2926-SM-5HL78 20.7
GTEX-12WSC-3026-SM-5GCNF 20.7
GTEX-13OVJ-2826-SM-5L3GW 20.7
GTEX-13QIC-2926-SM-5J2NF 20.6
GTEX-11GSO-2926-SM-5HL73 19.9
GTEX-12126-1026-SM-5P9JJ 19.9
GTEX-Y111-2726-SM-4TT3N 19.8
GTEX-13FHP-3026-SM-5IJBS 19.7
GTEX-11EI6-3026-SM-5GZZO 19.6
GTEX-XOTO-3026-SM-4B65M 19.5
GTEX-12WSH-3026-SM-5CVNI 19.4
GTEX-13O3Q-2926-SM-5KM45 19.3
GTEX-13OW7-3026-SM-5L3GY 19.3
GTEX-1313W-3126-SM-5LZUI 19.2
GTEX-11O72-2926-SM-5BC4V 19.1
GTEX-ZVT3-3026-SM-5E43N 19.1
GTEX-11OC5-0726-SM-5P9JK 19.0
GTEX-132Q8-3026-SM-5PNVG 18.9
GTEX-YJ89-3026-SM-5IFJI 18.8
GTEX-12ZZY-3026-SM-5GCOU 18.7
GTEX-R55F-1326-SM-5S2V4 18.6
GTEX-1399T-3026-SM-5KLZC 18.1
GTEX-13IVO-2926-SM-5L3CZ 17.8
GTEX-13JVG-3126-SM-5L3FH 17.8
GTEX-13G51-3026-SM-5IJB8 17.7
GTEX-13S7M-3126-SM-5RQJQ 17.7
GTEX-131XW-3126-SM-5LZUC 17.2
GTEX-NPJ7-2726-SM-2I3FT 16.8
GTEX-11ONC-2926-SM-5P9JM 16.5
GTEX-145MF-2726-SM-5O995 16.5
GTEX-13NYS-3126-SM-5KLYV 16.4
GTEX-13O3O-3126-SM-5KM3H 16.4
GTEX-OXRN-2426-SM-2I5EQ 16.4
GTEX-13PVQ-3026-SM-5SI93 16.2
GTEX-12WSD-3126-SM-5HL7P 16.0
GTEX-1445S-3026-SM-5O9BR 16.0
GTEX-11EMC-3226-SM-5EGKW 15.5
GTEX-N7MT-1126-SM-5SI7V 15.4
GTEX-11GSP-3226-SM-5986O 14.7
GTEX-139T8-1026-SM-5J2MC 14.7
GTEX-NPJ8-1526-SM-2D7VU 14.7
GTEX-PWO3-0926-SM-2I5EY 14.7
GTEX-11TTK-2926-SM-5PNYP 14.3
GTEX-12ZZW-2926-SM-5LZUP 13.9
GTEX-11GS4-3126-SM-5A5LH 13.8
GTEX-147GR-3026-SM-5S2ML 13.8
GTEX-Q2AG-2926-SM-2HMJ3 13.8
GTEX-ZZPT-3026-SM-5GZXH 13.8
GTEX-ZAJG-3126-SM-5HL9J 13.7
GTEX-1117F-3226-SM-5N9CT 13.6
GTEX-13JUV-2926-SM-5LZX7 13.2
GTEX-144FL-3026-SM-5O99C 13.0
GTEX-11NV4-2126-SM-5N9DS 11.6
GTEX-12WSA-2926-SM-5EQ4D 10.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 29.0
Samples: 108

Max RPKM: 54.9
Min RPKM: 11.9
Std RPKM: 8.9
Median RPKM: 29.4
GTEX-QDT8-0011-R10A-SM-32PKG 54.9
GTEX-WVLH-0011-R10A-SM-3MJFM 48.8
GTEX-QMR6-0011-R10A-SM-32PKO 48.7
GTEX-T6MN-0011-R10A-SM-32QP7 46.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 46.6
GTEX-WL46-0011-R10A-SM-3MJFQ 44.6
GTEX-Z93S-0011-R10a-SM-4RGNM 43.2
GTEX-X585-0011-R10A-SM-46MUY 43.1
GTEX-YFC4-0011-R10a-SM-4SOK5 42.4
GTEX-S7SE-0011-R10A-SM-2XCDF 41.3
GTEX-QVUS-0011-R10A-SM-3GIK3 40.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 40.1
GTEX-T5JC-0011-R10A-SM-32PM2 39.1
GTEX-WWYW-0011-R10A-SM-3NB35 38.0
GTEX-13O3Q-0011-R10b-SM-5KM39 37.7
GTEX-YJ89-0011-R10a-SM-4SOK9 37.6
GTEX-ZUA1-0011-R10a-SM-51MT6 37.5
GTEX-12WSE-0011-R10b-SM-5P9JV 36.8
GTEX-131XH-0011-R10a-SM-5EGLJ 36.8
GTEX-12WSF-0011-R10a-SM-5LZVH 36.4
GTEX-XLM4-0011-R10A-SM-4AT5P 36.3
GTEX-12126-0011-R10b-SM-5BC6T 35.6
GTEX-145MH-0011-R10b-SM-5PNUK 35.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 35.3
GTEX-12WSC-0011-R10a-SM-5GU57 35.2
GTEX-145MG-0011-R10a-SM-5PNWG 35.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 35.1
GTEX-131YS-0011-R10b-SM-5EQ5N 35.0
GTEX-1313W-0011-R10b-SM-5DUXA 34.9
GTEX-14BIN-0011-R10a-SM-5S2UA 34.5
GTEX-12WSM-0011-R10a-SM-5DUWV 33.8
GTEX-12WSD-0011-R10b-SM-5GU79 33.5
GTEX-X4XX-0011-R10B-SM-46MWO 33.4
GTEX-13QIC-0011-R10a-SM-5O9C7 33.2
GTEX-WZTO-0011-R10B-SM-4E3KB 33.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 33.1
GTEX-13FLW-0011-R10b-SM-5LZZF 32.8
GTEX-13X6J-0011-R10b-SM-5PNWA 32.8
GTEX-P44H-0011-R10A-SM-2XCEK 32.7
GTEX-13X6K-0011-R10a-SM-5P9JR 32.2
GTEX-13S7M-0011-R10b-SM-5PNZB 31.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 31.7
GTEX-TSE9-0011-R10A-SM-3DB7O 31.7
GTEX-13FHO-0011-R10b-SM-5J2MM 31.3
GTEX-13NYB-0011-R10a-SM-5KM43 31.2
GTEX-132Q8-0011-R10b-SM-5DUWZ 31.1
GTEX-11H98-0011-R10b-SM-5NQ98 30.7
GTEX-13CZV-0011-R10b-SM-5LZYD 30.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 30.7
GTEX-14BIL-0011-R10a-SM-5SI75 30.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 30.1
GTEX-ZVZQ-0011-R10b-SM-51MRT 30.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 29.7
GTEX-12WSH-0011-R10a-SM-5LZUS 29.6
GTEX-11ZUS-0011-R10b-SM-5BC79 29.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 29.0
GTEX-11WQK-0011-R10a-SM-5BC6R 28.9
GTEX-N7MS-0011-R10A-SM-2HMJK 28.9
GTEX-147GR-0011-R10b-SM-5S2UM 28.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 28.1
GTEX-13OVL-0011-R10a-SM-5L3GS 27.9
GTEX-13OW6-0011-R10a-SM-5L3HE 27.9
GTEX-13X6I-0011-R10a-SM-5PNWI 27.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 27.0
GTEX-13FXS-0011-R10a-SM-5J2MA 26.7
GTEX-13JUV-0011-R10b-SM-5LZXR 26.5
GTEX-13OW8-0011-R10a-SM-5L3H6 26.0
GTEX-13N1W-0011-R10b-SM-5MR4H 25.9
GTEX-X4EP-0011-R10B-SM-4QASJ 25.9
GTEX-145LU-0011-R10a-SM-5PNWJ 24.6
GTEX-139TS-0011-R10a-SM-5K7TU 24.5
GTEX-OXRN-0011-R10A-SM-2I5GC 24.5
GTEX-145LS-0011-R10a-SM-5PNUQ 24.3
GTEX-ZVT3-0011-R10b-SM-57WB6 24.3
GTEX-13N2G-0011-R10a-SM-5MR34 24.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 23.9
GTEX-NL3H-0011-R10A-SM-2I3E9 23.5
GTEX-13G51-0011-R10b-SM-5LZYF 23.4
GTEX-13SLW-0011-R10a-SM-5S2UI 23.4
GTEX-13OW7-0011-R10a-SM-5L3H3 23.3
GTEX-147F4-0011-R10b-SM-5S2WC 23.1
GTEX-13O3O-0011-R10a-SM-5LUA9 22.6
GTEX-ZF28-0011-R10a-SM-4WWEH 22.5
GTEX-13SLX-0011-R10a-SM-5P9HV 22.4
GTEX-N7MT-0011-R10A-SM-2I3E1 21.8
GTEX-13NYS-0011-R10a-SM-5MR4S 21.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 21.0
GTEX-1445S-0011-R10a-SM-5PNWB 20.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 20.5
GTEX-XMD1-0011-R10A-SM-4AT4A 18.8
GTEX-11WQC-0011-R10a-SM-57WCT 18.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 18.2
GTEX-13JVG-0011-R10b-SM-5KM2P 18.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 17.9
GTEX-ZXG5-0011-R10a-SM-57WDD 17.7
GTEX-13QJC-0011-R10a-SM-5SI63 17.6
GTEX-12ZZW-0011-R10b-SM-5HL9X 16.4
GTEX-14753-0011-R10b-SM-5S2WE 16.3
GTEX-RVPU-0011-R10A-SM-2XCAH 15.9
GTEX-ZV68-0011-R10a-SM-51MT7 15.5
GTEX-X261-0011-R10B-SM-4E3JT 15.1
GTEX-1477Z-0011-R10b-SM-5S2RF 14.9
GTEX-OXRO-0011-R10A-SM-2I5EH 14.5
GTEX-13NZA-0011-R10b-SM-5KM54 13.9
GTEX-NL4W-0011-R10A-SM-2I3DY 13.3
GTEX-13IVO-0011-R10a-SM-5LZY3 13.1
GTEX-12WSA-0011-R10b-SM-5P9ET 12.9
GTEX-131XW-0011-R10a-SM-5DUVA 11.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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