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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:76.5TPM
GTEx:22.2RPKM
FANTOM5:113.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Medium
Chondrocytes:Low
 
 

Antibody staining

Antibody HPA042890

  

Antibody HPA050453

  

Fibroblasts

 Medium   Medium  

Chondrocytes

 Low  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA042890

  

Antibody HPA050453

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Low  

Peripheral nerve

 Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

76.5
N/A Female, age 80
Sample 1
TPM: 80.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 118.6
N/A Female, age 57
Sample 3
TPM: 104.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 34.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 44.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

22.2

GTEx sample id

RPKM
17.121.527.38.941.305101520253035404550
 
17.121.527.38.941.305101520253035404550

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 23.0
Samples: 350

Max RPKM: 53.3
Min RPKM: 8.9
Std RPKM: 7.7
Median RPKM: 21.5
GTEX-Z93T-0226-SM-5HL5Z 53.3
GTEX-ZT9X-1926-SM-57WE7 48.8
GTEX-ZDTT-2626-SM-5S2OP 45.7
GTEX-T2IS-0226-SM-32QPH 45.5
GTEX-XUYS-0226-SM-47JX1 45.4
GTEX-ZQG8-1526-SM-5HL65 44.8
GTEX-TML8-2026-SM-32QOP 44.0
GTEX-WEY5-1926-SM-3GIL8 41.3
Show all
15.919.825.38.537.705101520253035404550
 
15.919.825.38.537.705101520253035404550

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 21.0
Samples: 227

Max RPKM: 53
Min RPKM: 8.5
Std RPKM: 7.1
Median RPKM: 19.8
GTEX-W5X1-1426-SM-3GIKH 53.0
GTEX-ZLWG-0726-SM-5S2NG 42.9
GTEX-Y5LM-0826-SM-4VDSW 42.8
GTEX-VUSG-1426-SM-3GIJN 40.7
GTEX-ZF2S-1526-SM-5S2OO 37.7
GTEX-ZQUD-0526-SM-57WG4 36.2
GTEX-13O21-3126-SM-5J1OI 36.1
GTEX-ZV6S-1626-SM-5NQ81 35.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

113.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 113.3
FF:10010-101C1 65,65,76 years, mixed 113.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.