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ABCD4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.5TPM
GTEx:10.7RPKM
FANTOM5:40.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA003396

  

Glandular cells

 Low  
 

COLON - HPA RNA-seq

Average TPM

5.5
overview Male, age 54
Sample 1
TPM: 6.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 7.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 11.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 4.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 3.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 4.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 4.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 2.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 3.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 3.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 6.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 7.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 4.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.7

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 10.8
Samples: 149

Max RPKM: 32.1
Min RPKM: 4.6
Std RPKM: 3.8
Median RPKM: 10.1
GTEX-13X6I-2726-SM-5Q5ET 32.1
GTEX-1477Z-2126-SM-5Q5CM 19.9
GTEX-13SLW-2826-SM-5Q5ES 19.7
GTEX-14E6C-2226-SM-5QGQG 19.7
GTEX-147GR-2826-SM-5RQK8 19.2
GTEX-ZVT4-2626-SM-5N9GJ 18.3
GTEX-13PVQ-2726-SM-5L3H7 17.3
GTEX-13OW6-2226-SM-5N9FL 17.0
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 10.7
Samples: 196

Max RPKM: 17.7
Min RPKM: 3.5
Std RPKM: 2.1
Median RPKM: 10.5
GTEX-13O3P-2326-SM-5KM55 17.7
GTEX-11O72-2226-SM-5PNW2 16.7
GTEX-13O3O-2526-SM-5L3DR 16.5
GTEX-13FHP-2426-SM-5KLZ5 15.0
GTEX-1128S-1626-SM-5H12O 14.8
GTEX-Q734-1126-SM-48TZY 14.7
GTEX-U3ZN-2126-SM-4DXU1 14.5
GTEX-148VJ-2626-SM-5QGPI 14.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

40.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 40.5
FF:10014-101C5 62,83,84 years, mixed 40.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.