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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ABCD4
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:4.0TPM
GTEx:13.0RPKM
FANTOM5:23.1Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA003396

 

Glandular cells

Low  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

4.0

overview Male, age 62
Sample 1
TPM: 1.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 4.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 6.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 2.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 2.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 4.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 6.0
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 6.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 4.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

13.0

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 13.0
Samples: 106

Max RPKM: 25
Min RPKM: 6.5
Std RPKM: 3.5
Median RPKM: 12.8
GTEX-NPJ8-2426-SM-3MJHL 25.0
GTEX-ZTTD-2726-SM-57WFA 21.4
GTEX-RWSA-2026-SM-47JX8 20.8
GTEX-11O72-2726-SM-5HL6K 20.5
GTEX-13FHO-2826-SM-5K7ZA 20.3
GTEX-13NYS-1026-SM-5KLZT 20.0
GTEX-11DYG-2526-SM-5N9BB 19.6
GTEX-UTHO-2726-SM-4JBH9 19.2
GTEX-11OF3-1726-SM-5GU5Q 18.8
GTEX-145LV-1226-SM-5S2QH 17.4
GTEX-U412-2026-SM-4DXSI 17.4
GTEX-14ABY-0726-SM-5Q5DF 17.2
GTEX-13N2G-1826-SM-5KM1I 17.1
GTEX-11NSD-0826-SM-5986S 17.0
GTEX-111FC-2026-SM-5GZYO 16.7
GTEX-132NY-2826-SM-5P9G2 16.7
GTEX-XOTO-2826-SM-4B65I 16.7
GTEX-13OW8-0426-SM-5J2NR 16.4
GTEX-13G51-2326-SM-5LZXV 15.9
GTEX-RM2N-1126-SM-48FCY 15.9
GTEX-144GM-0826-SM-5O98R 15.4
GTEX-OOBJ-2026-SM-3NB1R 15.4
GTEX-U4B1-1426-SM-4DXTX 15.4
GTEX-XAJ8-0626-SM-47JY4 15.3
GTEX-13O61-1726-SM-5KM46 15.0
GTEX-1399R-0526-SM-5IJEF 14.9
GTEX-S95S-1026-SM-4B64M 14.9
GTEX-146FQ-1726-SM-5QGPX 14.8
GTEX-WFON-1626-SM-4LVMV 14.8
GTEX-13O21-1126-SM-5N9EV 14.7
GTEX-V955-1826-SM-4JBIL 14.7
GTEX-11WQK-2726-SM-5EQMU 14.6
GTEX-11ZUS-2126-SM-5N9E6 14.4
GTEX-14BMV-2326-SM-5RQJ4 14.4
GTEX-QV44-1526-SM-4R1KI 14.3
GTEX-12ZZZ-2026-SM-5LZWJ 14.2
GTEX-139T6-1526-SM-5P9G6 14.1
GTEX-QEG4-2226-SM-4R1JM 14.1
GTEX-OIZH-2026-SM-3NB1M 14.0
GTEX-QMRM-1426-SM-4R1K8 13.9
GTEX-T8EM-1826-SM-4DM7F 13.9
GTEX-WZTO-0926-SM-4PQZ3 13.8
GTEX-XQ3S-2526-SM-4BOOG 13.8
GTEX-YJ8A-1126-SM-5IFJU 13.7
GTEX-145LT-0626-SM-5O99E 13.6
GTEX-REY6-2126-SM-48FD9 13.4
GTEX-S33H-1826-SM-4AD65 13.4
GTEX-ZZ64-0926-SM-5E44L 13.3
GTEX-V1D1-1926-SM-4JBGX 13.2
GTEX-WFG8-1826-SM-4LVM4 13.2
GTEX-Y8E4-2126-SM-5RQHO 13.2
GTEX-117YW-1426-SM-5EGGO 12.9
GTEX-ZLFU-1726-SM-4WWBU 12.8
GTEX-111CU-1526-SM-5N9FS 12.7
GTEX-111YS-1726-SM-5GIED 12.7
GTEX-WK11-2626-SM-4OOSK 12.6
GTEX-PLZ6-1126-SM-3P5ZR 12.5
GTEX-WH7G-1726-SM-4LVKY 12.4
GTEX-1399T-1226-SM-5P9J5 12.1
GTEX-S4Q7-1026-SM-4AD75 12.1
GTEX-131XF-1926-SM-5DUW4 12.0
GTEX-SJXC-2026-SM-4DM6N 11.9
GTEX-QLQ7-1326-SM-4R1JY 11.8
GTEX-11TUW-2126-SM-5GU7B 11.7
GTEX-SNMC-0926-SM-4DM5U 11.7
GTEX-XPVG-2026-SM-4B65E 11.6
GTEX-ZPU1-2026-SM-57WFI 11.6
GTEX-11TT1-2026-SM-5EQM8 11.5
GTEX-U8XE-2526-SM-4E3IT 11.5
GTEX-148VJ-1826-SM-5Q5DV 11.3
GTEX-13FXS-2826-SM-5LZYC 11.1
GTEX-X5EB-1826-SM-4E3K8 11.1
GTEX-XMK1-1026-SM-4B65H 11.1
GTEX-ZY6K-1526-SM-5GZXE 11.1
GTEX-12C56-1326-SM-5FQSV 11.0
GTEX-YF7O-1926-SM-4W1YQ 10.9
GTEX-WOFM-0326-SM-4OOSL 10.8
GTEX-13RTJ-2126-SM-5S2PZ 10.7
GTEX-Y9LG-1826-SM-4VBQC 10.7
GTEX-XGQ4-1826-SM-4AT6F 10.6
GTEX-ZTX8-1026-SM-5EGHD 10.6
GTEX-NFK9-2226-SM-3MJGP 10.4
GTEX-Q2AI-1126-SM-48U19 10.4
GTEX-13FTW-1226-SM-5LZZ1 10.3
GTEX-11P7K-0626-SM-5985Z 10.2
GTEX-S3XE-1326-SM-4AD4H 9.9
GTEX-SNOS-1026-SM-4DM4Y 9.7
GTEX-WFG7-1826-SM-3GIL1 9.6
GTEX-117YX-1526-SM-5H12T 9.4
GTEX-ZUA1-2826-SM-59HLE 9.4
GTEX-11EQ9-1726-SM-5HL6U 9.3
GTEX-VJYA-1226-SM-3GIJ6 9.1
GTEX-YB5E-1826-SM-5IFI4 9.0
GTEX-QV31-1026-SM-4R1K3 8.8
GTEX-11P82-1126-SM-5BC5K 8.7
GTEX-U3ZM-0926-SM-4DXSW 8.5
GTEX-12BJ1-1226-SM-5LUAE 8.2
GTEX-132QS-1126-SM-5P9GC 8.1
GTEX-ZDYS-1226-SM-5IJF3 8.1
GTEX-14C5O-2826-SM-5RQI6 7.9
GTEX-OOBK-2025-SM-3LK5S 7.9
GTEX-13111-1326-SM-5GCNO 7.8
GTEX-ZT9W-1626-SM-4YCDQ 7.7
GTEX-ZVP2-0826-SM-59HJ6 7.1
GTEX-12696-2226-SM-5EQ65 6.5
GTEX-14E6E-1126-SM-5S2R4 6.5
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

23.1

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 23.1
FF:10022-101D4 73,79,93 years, male 23.1

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