Fields »
ABOUT
HELP
BLOG
DLST

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:70.3TPM
GTEx:50.3RPKM
FANTOM5:78.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA003010

  

Adipocytes

 Medium  

Fibroblasts

 Medium  
    
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody HPA003010

  

Adipocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Low  
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

70.3
N/A Female, age 80
Sample 1
TPM: 63.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 71.5
N/A Female, age 57
Sample 3
TPM: 65.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 65.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 85.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

50.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 52.3
Samples: 350

Max RPKM: 86.1
Min RPKM: 35.9
Std RPKM: 8.1
Median RPKM: 50.4
GTEX-11EMC-2826-SM-5PNY6 86.1
GTEX-REY6-0326-SM-2TF5A 79.5
GTEX-PWCY-1926-SM-3NB25 76.8
GTEX-Y114-2326-SM-4TT7X 76.3
GTEX-13OVI-1326-SM-5IJBO 75.6
GTEX-117YX-2226-SM-5EGJJ 74.6
GTEX-11P82-1726-SM-5Q5AT 74.3
GTEX-1211K-2226-SM-5FQU6 74.1
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 47.3
Samples: 227

Max RPKM: 73.1
Min RPKM: 30
Std RPKM: 8.9
Median RPKM: 45.9
GTEX-ZT9W-1026-SM-57WG5 73.1
GTEX-ZLWG-0726-SM-5S2NG 69.8
GTEX-Y5LM-0826-SM-4VDSW 69.5
GTEX-13RTK-0726-SM-5Q5EN 69.4
GTEX-ZP4G-1326-SM-5EGIW 69.3
GTEX-ZZ64-0626-SM-5GZWR 68.9
GTEX-1339X-0726-SM-5L3FF 68.8
GTEX-11I78-0226-SM-5HL6R 68.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

78.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 78.9
FF:10010-101C1 65,65,76 years, mixed 78.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.