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PDLIM2
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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:273.0TPM
GTEx:20.7RPKM
FANTOM5:93.2Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Low
 

Antibody staining

Antibody HPA003880

 

Cells in red pulp

Medium  

Cells in white pulp

Low  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

273.0

overview Female, age 60
Sample 1
TPM: 274.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 312.7
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 275.1
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 391.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 110.6
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

20.7

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 20.7
Samples: 104

Max RPKM: 49.3
Min RPKM: 7.4
Std RPKM: 6.9
Median RPKM: 19.6
GTEX-13111-0126-SM-5EGHO 49.3
GTEX-QMRM-0226-SM-4R1K7 37.5
GTEX-ZVZP-0726-SM-59HKA 36.3
GTEX-VJYA-0126-SM-4KL1P 35.8
GTEX-PLZ6-0126-SM-48TC6 35.6
GTEX-PX3G-0926-SM-48U12 34.3
GTEX-P4PP-0926-SM-48TBZ 32.4
GTEX-YB5K-1926-SM-4VDT4 32.4
GTEX-ZPU1-1026-SM-4YCEQ 32.3
GTEX-QLQW-0126-SM-447BK 31.7
GTEX-1122O-0526-SM-5N9DM 30.2
GTEX-X4LF-0226-SM-4QAS8 29.4
GTEX-T5JW-0126-SM-4DM6K 29.2
GTEX-XGQ4-0126-SM-4AT4H 29.2
GTEX-U3ZH-0126-SM-4DXUK 27.3
GTEX-X585-1826-SM-4QAS3 27.2
GTEX-PW2O-0126-SM-48TC8 27.0
GTEX-12WSG-0926-SM-5EGIH 26.9
GTEX-POMQ-0126-SM-48TD6 26.3
GTEX-U3ZN-0126-SM-4DXUM 26.2
GTEX-XMK1-0126-SM-4B65F 25.8
GTEX-UJHI-0126-SM-4IHLP 25.6
GTEX-132QS-0226-SM-5IFFZ 25.3
GTEX-XQ8I-1726-SM-4BOQB 24.9
GTEX-11P81-1326-SM-5GU5S 24.8
GTEX-XXEK-0126-SM-4BRVU 24.3
GTEX-U4B1-0526-SM-4DXTK 24.2
GTEX-ZDTT-1026-SM-5KM19 23.8
GTEX-13X6H-0726-SM-5Q5BX 23.5
GTEX-13PVR-0326-SM-5RQJY 23.3
GTEX-13CF3-0226-SM-5J1NW 22.8
GTEX-Y3I4-0126-SM-4TT26 22.8
GTEX-W5WG-0626-SM-4SOID 22.7
GTEX-11LCK-0126-SM-5A5M5 22.4
GTEX-Z9EW-0726-SM-5HL9H 22.2
GTEX-1399S-0226-SM-5IFFG 21.9
GTEX-QV31-0126-SM-447BP 21.7
GTEX-YFCO-0926-SM-5LUA5 21.6
GTEX-144GN-2126-SM-5O99D 21.5
GTEX-OIZH-0926-SM-48TBR 21.4
GTEX-ZZPU-0126-SM-5E446 21.4
GTEX-11DXX-0726-SM-5H12X 21.3
GTEX-146FQ-0626-SM-5LU9U 21.3
GTEX-P4QS-0926-SM-48TBS 20.9
GTEX-WHWD-0126-SM-4OORS 20.9
GTEX-11P7K-0426-SM-5BC5H 20.8
GTEX-XUJ4-0226-SM-4BOP8 20.7
GTEX-Q734-0226-SM-48U1A 20.3
GTEX-13N11-0126-SM-5KM2Z 20.1
GTEX-YB5E-0426-SM-5IFHR 20.1
GTEX-145MN-0126-SM-5RQHY 20.0
GTEX-14DAR-0326-SM-5S2PS 19.8
GTEX-139T6-0226-SM-5IFGZ 19.4
GTEX-11NSD-0426-SM-5N9CR 19.3
GTEX-XPVG-0626-SM-4B65B 18.7
GTEX-S4Z8-0226-SM-4AD5K 18.5
GTEX-X3Y1-0126-SM-4PQZA 18.5
GTEX-12WSJ-0526-SM-5GCOZ 18.4
GTEX-UPK5-1626-SM-4JBHI 18.4
GTEX-1211K-0426-SM-5FQTP 18.3
GTEX-147F3-0126-SM-5NQBJ 18.2
GTEX-S3XE-0626-SM-4AD6B 18.1
GTEX-WFON-0126-SM-4LVM9 18.1
GTEX-1399R-0226-SM-5IJGG 17.8
GTEX-12WSK-0126-SM-5GCO7 17.5
GTEX-YEC4-0126-SM-4W21T 17.4
GTEX-12WSN-0126-SM-5DUX5 17.1
GTEX-XV7Q-0126-SM-4BRVK 17.1
GTEX-131XG-0426-SM-5IFGD 16.9
GTEX-13FH7-1326-SM-5IFG8 16.9
GTEX-ZVP2-0526-SM-51MSC 16.9
GTEX-Y114-0726-SM-4TT6U 16.7
GTEX-OOBJ-0926-SM-48TDO 16.6
GTEX-XAJ8-0126-SM-47JYG 16.5
GTEX-ZLFU-0526-SM-4WWBN 16.3
GTEX-ZYWO-0226-SM-5GZX3 16.1
GTEX-Y5LM-0326-SM-4VBRN 16.0
GTEX-11EQ9-0426-SM-5A5JY 15.9
GTEX-11XUK-0426-SM-5EQML 15.8
GTEX-13VXT-1326-SM-5LU3Y 15.5
GTEX-139YR-0426-SM-5IFFV 15.3
GTEX-Y3IK-0126-SM-4WWE9 15.2
GTEX-QCQG-0226-SM-48U28 14.9
GTEX-QV44-0126-SM-4R1KH 14.8
GTEX-131XE-1126-SM-5EGHW 14.7
GTEX-13PL7-1126-SM-5MR5O 14.7
GTEX-ZYFG-0726-SM-5GIDX 14.7
GTEX-Y8LW-0126-SM-4VBS1 14.6
GTEX-ZP4G-0326-SM-4YCEF 14.5
GTEX-12BJ1-0726-SM-5EGGF 14.3
GTEX-11VI4-0126-SM-5GU6Z 13.8
GTEX-13U4I-1626-SM-5IFFR 13.8
GTEX-13S86-0126-SM-5S2PI 13.3
GTEX-R55G-0226-SM-48FEI 13.3
GTEX-14E6E-1226-SM-5S2R5 13.2
GTEX-ZAB5-0526-SM-5CVMU 12.9
GTEX-146FR-1926-SM-5NQA6 12.8
GTEX-QDVN-0526-SM-48TZ4 11.8
GTEX-O5YT-0926-SM-48TDG 11.5
GTEX-Q2AH-0226-SM-48U1I 11.2
GTEX-117YX-2126-SM-5GIEL 10.9
GTEX-ZV6S-0826-SM-5NQ6Z 10.7
GTEX-ZLWG-0426-SM-4WWFA 10.0
GTEX-RUSQ-0126-SM-47JWV 7.4
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

93.2

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 93.2
FF:10025-101D7 39,50,70 years, male 93.2

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