We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CLTA
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:108.4TPM
GTEx:52.8RPKM
FANTOM5:189.4Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA050918

 

Antibody HPA054667

 

Adipocytes

Not detected   Not detected  

Glandular cells

Low   Low  

Myoepithelial cells

Not detected   Not detected  
   
   
   

BREAST - HPA RNA-seq

Average TPM

108.4

overview Female, age 52
Sample 1
TPM: 114.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 101.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 111.0
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 107.5
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

52.8

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 52.8
Samples: 214

Max RPKM: 108
Min RPKM: 32.8
Std RPKM: 10.3
Median RPKM: 51.6
GTEX-14ABY-2126-SM-5QGQZ 108.0
GTEX-13S86-1226-SM-5S2OA 91.6
GTEX-11TT1-2126-SM-5GU5Y 91.3
GTEX-14AS3-1626-SM-5S2OY 87.8
GTEX-Y8E4-1626-SM-5S2MW 84.3
GTEX-145LT-0726-SM-5S2VM 84.2
GTEX-13NZ9-1026-SM-5MR5K 74.1
GTEX-ZTTD-1026-SM-51MRD 73.4
GTEX-ZVT2-1826-SM-5NQ8W 72.4
GTEX-13D11-1026-SM-5IJFB 72.2
GTEX-11DZ1-0326-SM-5N9BN 70.6
GTEX-ZAB4-2526-SM-5HL8M 69.7
GTEX-Y5LM-1726-SM-4VDSX 68.5
GTEX-ZLFU-2126-SM-4WWEV 68.5
GTEX-XMD2-0926-SM-4WWEF 68.1
GTEX-ZYWO-2326-SM-5GZY4 68.1
GTEX-12WSK-2226-SM-5GCO5 68.0
GTEX-13NZ8-0126-SM-5IJCT 64.4
GTEX-146FH-0826-SM-5SI8T 64.0
GTEX-139TU-0626-SM-5KM3X 63.7
GTEX-13NZB-2126-SM-5MR4Y 63.6
GTEX-13W46-0826-SM-5LU3H 62.6
GTEX-S33H-0326-SM-4AD6N 62.6
GTEX-ZVE2-1226-SM-5NQ8R 62.5
GTEX-11WQC-1726-SM-5GU4W 62.0
GTEX-1192X-2326-SM-5987X 61.6
GTEX-1313W-0826-SM-5EQ4T 61.5
GTEX-ZTX8-1226-SM-4YCE9 61.5
GTEX-145MN-1926-SM-5SIAI 61.3
GTEX-13O61-1826-SM-5KM4I 61.2
GTEX-ZWKS-2826-SM-5NQ74 61.1
GTEX-132AR-0826-SM-5EGK6 60.8
GTEX-XYKS-1326-SM-4BRUN 60.8
GTEX-ZV6S-1826-SM-5NQ8D 60.8
GTEX-ZVTK-0326-SM-51MRR 60.8
GTEX-VUSG-2226-SM-4KKZO 60.7
GTEX-13O3O-0826-SM-5K7WE 60.6
GTEX-ZXES-0826-SM-5E43C 60.6
GTEX-1117F-2826-SM-5GZXL 60.2
GTEX-XUZC-1626-SM-4BRVP 60.1
GTEX-11P7K-0726-SM-5EGKX 60.0
GTEX-11EM3-1326-SM-5N9C6 59.5
GTEX-Y114-2026-SM-4TT7L 59.4
GTEX-1399U-1826-SM-5PNZ1 59.3
GTEX-ZYFC-0826-SM-5E44K 59.3
GTEX-133LE-1726-SM-5K7VQ 59.2
GTEX-131YS-0626-SM-5EGKL 59.0
GTEX-ZVZQ-0826-SM-51MRF 58.8
GTEX-11DXY-2326-SM-5GICW 58.7
GTEX-S7SE-0826-SM-4AT4D 58.7
GTEX-ZY6K-1626-SM-5GZWV 58.2
GTEX-Y3I4-1526-SM-4TT7K 58.1
GTEX-117YX-1426-SM-5H12H 57.9
GTEX-QEL4-2126-SM-447AE 57.4
GTEX-11EQ9-1826-SM-5Q5AJ 57.2
GTEX-Y5V6-2126-SM-4WWFX 57.0
GTEX-ZA64-1526-SM-5CVMD 57.0
GTEX-11ONC-2126-SM-5HL6E 56.8
GTEX-ZYW4-0826-SM-5GIDG 56.7
GTEX-ZC5H-2626-SM-5J2MG 56.6
GTEX-S341-1526-SM-4AD6K 56.5
GTEX-ZAJG-0626-SM-5HL8X 56.5
GTEX-13FTW-1426-SM-5LZWZ 56.2
GTEX-131XW-0726-SM-5EGK3 56.0
GTEX-11EI6-0626-SM-5985T 55.9
GTEX-12WSN-1326-SM-5GCNT 55.3
GTEX-1122O-1226-SM-5H113 55.2
GTEX-YFCO-1826-SM-4W1YH 55.2
GTEX-12WSB-0626-SM-59HJO 55.0
GTEX-12ZZX-1126-SM-5EGKB 55.0
GTEX-ZQUD-1926-SM-51MSA 55.0
GTEX-1314G-1226-SM-5BC6D 54.9
GTEX-S4P3-1326-SM-4AD6V 54.8
GTEX-ZEX8-2226-SM-57WC6 54.8
GTEX-ZLV1-1426-SM-4WWES 54.6
GTEX-139T8-0826-SM-5L3DE 54.4
GTEX-XV7Q-2326-SM-4BRVZ 54.4
GTEX-11O72-2126-SM-5N9FO 54.1
GTEX-R3RS-0626-SM-48FE1 54.1
GTEX-ZU9S-1926-SM-5NQBP 54.0
GTEX-13FHO-0826-SM-5L3E8 53.8
GTEX-ZVT4-1026-SM-57WC4 53.8
GTEX-13PL6-2926-SM-5L3I2 53.6
GTEX-UJHI-1426-SM-3DB9C 53.6
GTEX-XQ8I-2426-SM-4WAXY 53.6
GTEX-Y5V5-2126-SM-4WWFO 53.6
GTEX-11WQK-2426-SM-5GU5C 53.5
GTEX-11NSD-0926-SM-5N9DR 53.4
GTEX-12WSM-1726-SM-5BC6J 53.4
GTEX-ZDXO-0126-SM-5S2ND 53.0
GTEX-ZZPU-0626-SM-5E43T 52.8
GTEX-11I78-2226-SM-5PNYA 52.6
GTEX-13FTX-1126-SM-5N9EN 52.5
GTEX-U8XE-0826-SM-4E3J1 52.5
GTEX-XOT4-0726-SM-4GIAW 52.4
GTEX-ZZ64-1226-SM-5E43R 52.4
GTEX-ZDTT-2126-SM-5S2OJ 52.3
GTEX-13113-1726-SM-5GCOO 52.2
GTEX-RWS6-1926-SM-47JXY 52.1
GTEX-U3ZN-1926-SM-4DXSG 52.0
GTEX-1211K-1926-SM-5EQLB 51.9
GTEX-13N11-1726-SM-5J1OJ 51.9
GTEX-11GSO-1926-SM-5A5K3 51.8
GTEX-QEG5-0726-SM-4R1JQ 51.8
GTEX-S32W-2026-SM-4AD6E 51.8
GTEX-11OF3-1926-SM-59889 51.7
GTEX-WYJK-1326-SM-3NB2T 51.7
GTEX-X15G-1626-SM-3NMB3 51.4
GTEX-13W3W-1226-SM-5LU4H 51.2
GTEX-XMD1-0826-SM-4AT52 51.2
GTEX-X4XY-0926-SM-4E3JD 51.1
GTEX-YFC4-1426-SM-5IFJG 51.0
GTEX-X261-0626-SM-3NMD9 50.9
GTEX-ZV7C-1826-SM-5NQ83 50.9
GTEX-132NY-0826-SM-5K7Y7 50.5
GTEX-13O3P-0826-SM-5L3DH 50.5
GTEX-139T6-1626-SM-5PNYZ 50.4
GTEX-WXYG-2226-SM-4E3IM 50.4
GTEX-Y8LW-1626-SM-5IFHX 50.4
GTEX-ZPIC-1126-SM-5BC7F 50.4
GTEX-ZT9W-2026-SM-51MRA 50.4
GTEX-ZYT6-0126-SM-5E45J 50.3
GTEX-QVJO-1826-SM-447C9 50.0
GTEX-12KS4-0126-SM-5Q5A5 49.9
GTEX-Q2AG-0326-SM-48U1O 49.9
GTEX-13OW8-0226-SM-5K7UP 49.7
GTEX-T5JW-2026-SM-4DM63 49.7
GTEX-ZUA1-1526-SM-59HLS 49.7
GTEX-14753-2426-SM-5LU8U 49.4
GTEX-T2IS-1526-SM-32QPR 49.4
GTEX-XBED-1626-SM-47JYN 49.4
GTEX-11NV4-2026-SM-5N9DG 49.3
GTEX-11LCK-2426-SM-5HL5F 48.9
GTEX-13O3Q-2226-SM-5KM4O 48.9
GTEX-UPK5-2326-SM-3P5Z8 48.9
GTEX-YB5K-1626-SM-5IFIN 48.9
GTEX-Y3IK-2326-SM-4WWDT 48.8
GTEX-11PRG-0826-SM-5EQ6A 48.7
GTEX-11ZUS-0826-SM-5FQUY 48.7
GTEX-WOFL-0826-SM-3MJG1 48.7
GTEX-145MO-0826-SM-5NQBL 48.6
GTEX-144GL-2026-SM-5LU3O 48.4
GTEX-S4UY-0726-SM-4AD6X 48.3
GTEX-132Q8-1426-SM-5EGK7 48.2
GTEX-11ZTT-2326-SM-5EQLG 48.1
GTEX-TMMY-0726-SM-33HBE 48.0
GTEX-XUW1-2326-SM-4BOO5 48.0
GTEX-13FTY-2226-SM-5J1ND 47.9
GTEX-ZDYS-1126-SM-5K7UB 47.8
GTEX-SE5C-2126-SM-4BRUJ 47.3
GTEX-14E6E-1326-SM-5S2NR 47.2
GTEX-XUJ4-1926-SM-4BOOV 47.2
GTEX-XGQ4-0926-SM-4AT4U 47.1
GTEX-W5X1-2326-SM-3GIL6 46.9
GTEX-YEC3-1026-SM-5IFI5 46.9
GTEX-S4Q7-1126-SM-4AD6R 46.8
GTEX-11P82-1326-SM-5HL62 46.7
GTEX-SIU7-1626-SM-4BRUK 46.7
GTEX-U3ZH-1426-SM-4DXSR 46.7
GTEX-R55D-0826-SM-48FEA 46.6
GTEX-WY7C-2726-SM-3NB3P 46.6
GTEX-QMRM-1626-SM-4R1KV 46.2
GTEX-QDT8-0626-SM-48TYW 46.0
GTEX-13CF3-2126-SM-5IFJP 45.8
GTEX-XQ3S-1326-SM-4BOPQ 45.8
GTEX-YJ8O-2226-SM-5IFHW 45.8
GTEX-13OW5-2226-SM-5L3HC 45.7
GTEX-11TUW-1826-SM-5BC5D 45.5
GTEX-13CF2-2026-SM-5K7VI 45.5
GTEX-RU72-0626-SM-46MUI 45.5
GTEX-11EMC-2026-SM-5A5JV 45.4
GTEX-R53T-1526-SM-48FEK 45.4
GTEX-WI4N-1426-SM-3LK7H 45.4
GTEX-11DXW-0626-SM-5N9ER 44.9
GTEX-13QIC-2326-SM-5LU5N 44.9
GTEX-Y111-2026-SM-4SOJA 44.7
GTEX-144GM-0926-SM-5O994 44.6
GTEX-111YS-1926-SM-5GICC 44.4
GTEX-ZF2S-2026-SM-5E461 44.4
GTEX-11P81-1926-SM-5BC53 44.3
GTEX-ZF29-1926-SM-5S2P1 44.0
GTEX-11GS4-2126-SM-5A5KR 43.8
GTEX-ZQG8-0726-SM-5P9H9 43.6
GTEX-PSDG-1626-SM-48TCQ 43.4
GTEX-TKQ2-1826-SM-33HB2 43.3
GTEX-11DXZ-1926-SM-5GZZL 43.0
GTEX-RUSQ-2026-SM-4GIAK 43.0
GTEX-WYBS-0926-SM-3NM94 43.0
GTEX-1269C-2426-SM-5FQSN 42.9
GTEX-WYVS-1726-SM-3NMAY 42.7
GTEX-12BJ1-1826-SM-5HL9N 42.3
GTEX-REY6-2426-SM-48FF5 41.9
GTEX-YB5E-1726-SM-5IFJ3 41.9
GTEX-117XS-1926-SM-5GICO 41.8
GTEX-145ME-1526-SM-5Q5F2 41.8
GTEX-UTHO-1026-SM-3GAF7 41.4
GTEX-T6MO-0326-SM-32QOK 41.3
GTEX-Y9LG-1426-SM-5IFJZ 41.2
GTEX-ZF3C-2326-SM-5S2MZ 41.2
GTEX-X4EP-2926-SM-3P5YQ 41.0
GTEX-147F4-2826-SM-5NQBN 40.9
GTEX-T2YK-2226-SM-32QPT 40.1
GTEX-13N1W-0626-SM-5MR4U 39.1
GTEX-13PVQ-1026-SM-5KM3M 38.0
GTEX-WFON-1826-SM-3GILG 37.8
GTEX-XMK1-1126-SM-4IHJ8 37.5
GTEX-T6MN-0726-SM-32PML 36.7
GTEX-TML8-1226-SM-32QON 36.7
GTEX-WRHU-0326-SM-3MJFY 36.6
GTEX-U412-1826-SM-4DXTJ 35.6
GTEX-R55F-1726-SM-2TF4R 35.0
GTEX-TKQ1-0226-SM-33HB5 34.9
GTEX-VJWN-0726-SM-3GIJ8 33.0
GTEX-T5JC-2126-SM-32PMO 32.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

189.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 189.4
FF:10080-102A8 77 years, female 189.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.