Fields »
ABOUT
HELP
BLOG
ATG101

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:27.7TPM
GTEx:12.7RPKM
FANTOM5:11.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:High
 
 
 

Antibody staining

Antibody HPA039904

  

Adipocytes

 Low  

Fibroblasts

 High  
    
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Medium
Fibroblasts:High
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA039904

  

Adipocytes

 Not detected  

Chondrocytes

 Medium  

Fibroblasts

 High  

Peripheral nerve

 Medium  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

27.7
N/A Female, age 80
Sample 1
TPM: 28.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 12.7
N/A Female, age 57
Sample 3
TPM: 13.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 43.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 40.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

12.7

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 10.8
Samples: 350

Max RPKM: 21.9
Min RPKM: 3.3
Std RPKM: 2.6
Median RPKM: 10.4
GTEX-11EMC-2826-SM-5PNY6 21.9
GTEX-ZYVF-0226-SM-5GIEG 20.6
GTEX-ZYFD-0226-SM-5NQ86 19.3
GTEX-XYKS-2726-SM-4E3IC 18.9
GTEX-QESD-1526-SM-2S1QT 18.1
GTEX-13NZ9-0526-SM-5J1OX 17.6
GTEX-ZYY3-0226-SM-5E45M 17.6
GTEX-144GM-1926-SM-5LUAN 17.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 15.7
Samples: 227

Max RPKM: 37
Min RPKM: 6.8
Std RPKM: 4.6
Median RPKM: 15.1
GTEX-11WQK-1526-SM-5EGKN 37.0
GTEX-13IVO-2426-SM-5K7V9 35.6
GTEX-YJ89-1926-SM-5IFJ6 27.1
GTEX-1399S-1426-SM-5PNYQ 26.7
GTEX-ZTX8-0726-SM-59HL9 26.4
GTEX-13X6H-1726-SM-5Q5EH 25.9
GTEX-11P82-0326-SM-5HL51 25.8
GTEX-1212Z-0526-SM-5FQSQ 23.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

11.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 11.9
FF:10010-101C1 65,65,76 years, mixed 11.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.