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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:524.8RPKM
FANTOM5:1120.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA004128

 

Glial cells

Not detected  

Neuronal cells

Low  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

524.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 524.8
Samples: 117

Max RPKM: 2333.5
Min RPKM: 105.9
Std RPKM: 341.4
Median RPKM: 416.4
GTEX-12WSA-0011-R5b-SM-5GU5I 2333.5
GTEX-WL46-0011-R5A-SM-3LK6V 1764.3
GTEX-QMR6-0011-R5A-SM-32PKT 1748.2
GTEX-PVOW-0011-R5A-SM-32PL7 1487.5
GTEX-X4XX-0011-R5A-SM-46MWN 1393.5
GTEX-N7MS-0011-R5a-SM-2HMK8 1161.8
GTEX-Z93S-0011-R5b-SM-4RGNI 1149.8
GTEX-WWYW-0011-R5A-SM-3NB3E 998.1
GTEX-11NV4-0011-R5a-SM-5NQ88 935.4
GTEX-12WSB-0011-R5b-SM-5GU67 916.5
GTEX-R55E-0011-R5A-SM-2TC5N 900.9
GTEX-WZTO-0011-R5B-SM-3NMC5 870.3
GTEX-13NYB-0011-R5a-SM-5MR45 866.5
GTEX-NPJ7-0011-R5a-SM-33HBK 860.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 834.1
GTEX-X585-0011-R5A-SM-46MVI 823.2
GTEX-13X6I-0011-R5a-SM-5PNWW 809.8
GTEX-13O3O-0011-R5b-SM-5KM44 802.8
GTEX-12WSF-0011-R5a-SM-5HL8K 772.2
GTEX-RVPV-0011-R5A-SM-2TF69 771.3
GTEX-YFC4-0011-R5a-SM-4RGLR 769.3
GTEX-XOTO-0011-R5A-SM-4B657 753.3
GTEX-13FLV-0011-R5a-SM-5LZWT 696.1
GTEX-144GL-0011-R5b-SM-5PNUJ 690.6
GTEX-145LS-0011-R5a-SM-5SI65 683.6
GTEX-13FHP-0011-R5b-SM-5LZY2 682.0
GTEX-13OVH-0011-R5b-SM-5KM4L 676.3
GTEX-11WQC-0011-R5a-SM-5BC74 665.3
GTEX-ZXG5-0011-R5b-SM-57WBN 632.1
GTEX-14BIN-0011-R5b-SM-5SI78 621.8
GTEX-12WSH-0011-R5b-SM-5P9F3 611.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 610.1
GTEX-QVJO-0011-R5A-SM-2S1QM 605.1
GTEX-WVLH-0011-R5A-SM-3MJFW 573.9
GTEX-13112-0011-R5b-SM-5DUV8 563.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 536.8
GTEX-13FXS-0011-R5b-SM-5LZYE 535.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 523.7
GTEX-13FLW-0011-R5a-SM-5LZX6 523.2
GTEX-13X6K-0011-R5b-SM-5PNUE 522.2
GTEX-13CF2-0011-R5a-SM-5LZWS 515.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 512.8
GTEX-ZUA1-0011-R5b-SM-51MTG 510.7
GTEX-NL4W-0011-R5a-SM-2I3GD 506.1
GTEX-13JVG-0011-R5a-SM-5MR4O 490.1
GTEX-NL3H-0011-R5a-SM-2I3GB 471.4
GTEX-13OW7-0011-R5b-SM-5O9DM 467.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 464.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 459.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 453.2
GTEX-ZVT3-0011-R5a-SM-51MSI 451.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 441.4
GTEX-RVPU-0011-R5A-SM-2XCAD 437.5
GTEX-131YS-0011-R5b-SM-5K7YB 435.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 431.3
GTEX-UTHO-0011-R5A-SM-3GIJD 420.1
GTEX-13S7M-0011-R5b-SM-5P9HS 419.7
GTEX-ZE7O-0011-R5a-SM-57WBO 418.1
GTEX-132Q8-0011-R5a-SM-5IJDM 416.4
GTEX-XMD1-0011-R5A-SM-4AT47 411.8
GTEX-12WSD-0011-R5b-SM-5CVNG 410.4
GTEX-13OVL-0011-R5b-SM-5L3FU 400.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 398.7
GTEX-1445S-0011-R5a-SM-5PNUS 392.7
GTEX-YJ89-0011-R5a-SM-4V6GM 390.1
GTEX-14ABY-0011-R5b-SM-5SI7B 384.1
GTEX-S7SE-0011-R5A-SM-2XCDA 382.2
GTEX-11H98-0011-R5b-SM-57WCF 380.1
GTEX-1313W-0011-R5b-SM-5L3EP 377.3
GTEX-11GSP-0011-R5a-SM-57WBE 376.6
GTEX-145MH-0011-R5a-SM-5P9JT 376.3
GTEX-13SLX-0011-R5a-SM-5O9BV 375.8
GTEX-144GO-0011-R5a-SM-5PNUR 372.5
GTEX-OHPN-0011-R5A-SM-2I5FF 369.6
GTEX-13OW6-0011-R5a-SM-5O9BK 366.7
GTEX-139TS-0011-R5b-SM-5J2MZ 359.9
GTEX-12ZZX-0011-R5a-SM-5HL89 358.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 358.3
GTEX-11UD1-0011-R5b-SM-5P9FP 352.4
GTEX-S7PM-0011-R5A-SM-3NM8G 345.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 341.5
GTEX-1399T-0011-R5b-SM-5IJDK 340.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 339.1
GTEX-13VXU-0011-R5a-SM-5O9D7 338.4
GTEX-12WSC-0011-R5b-SM-5CVNS 337.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 336.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 333.3
GTEX-P44H-0011-R5A-SM-2XCEX 329.7
GTEX-139TT-0011-R5b-SM-5K7W8 328.2
GTEX-T5JC-0011-R5A-SM-32PLK 317.0
GTEX-11OF3-0011-R5a-SM-57WB4 315.5
GTEX-N7MT-0011-R5a-SM-2I3G6 305.5
GTEX-RU72-0011-R5A-SM-2TF6U 303.2
GTEX-13OW5-0011-R5b-SM-5L3FR 301.4
GTEX-13NYS-0011-R5a-SM-5MR4D 293.9
GTEX-OXRN-0011-R5A-SM-2I5EF 292.3
GTEX-13X6J-0011-R5b-SM-5PNWT 290.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 289.4
GTEX-139T8-0011-R5b-SM-5J1MO 289.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 283.2
GTEX-1477Z-0011-R5b-SM-5PNUO 273.7
GTEX-ZV68-0011-R5a-SM-4YCDW 269.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 261.2
GTEX-T2IS-0011-R5A-SM-32QP4 260.7
GTEX-14BIM-0011-R5b-SM-5S2RM 255.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 255.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 248.4
GTEX-T6MN-0011-R5A-SM-32QPD 247.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 221.3
GTEX-X261-0011-R5A-SM-3NMB4 221.1
GTEX-13G51-0011-R5a-SM-5L3EB 219.3
GTEX-TSE9-0011-R5A-SM-3DB7J 210.6
GTEX-13CZV-0011-R5a-SM-5K7XA 210.1
GTEX-13JUV-0011-R5a-SM-5LZY5 178.1
GTEX-13NZA-0011-R5b-SM-5KM4K 164.7
GTEX-145MG-0011-R5b-SM-5S2VU 155.6
GTEX-13CIG-0011-R5b-SM-5L3F2 105.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

1120.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 1120.3
FF:10164-103B2 76 years, female 1393.9
FF:10379-105H1 89 years, female 846.6

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