Tissue expression of APOBEC2 - Staining in colon

COLON - Expression summary

Protein expression

RNA expression

HPA:	0.4	TPM
GTEx:	0.4	RPKM
FANTOM5:	0.2	Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glandular cells:	Not detected
Peripheral nerve/ganglion:	Not detected

Antibody staining	Antibody HPA014252	Antibody HPA017957
Endothelial cells	Not detected	Not detected
Glandular cells	Not detected	Not detected
Peripheral nerve/ganglion	Not detected	Not detected

COLON - HPA RNA-seq

Average TPM	0.4

Male, age 54

Sample 1
TPM: 0.3

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 0.3

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 0.3

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 0.4

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 0.3

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 0.8

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 0.4

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 0.2

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 0.6

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 0.0

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 0.3

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 0.4

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 0.5

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	0.4

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.5

Samples: 149

Max RPKM: 2.7
Min RPKM: 0.1
Std RPKM: 0.4
Median RPKM: 0.4

GTEX-YEC3-2026-SM-4WWFL

2.7

GTEX-117XS-2226-SM-5GIE1

2.5

GTEX-1211K-1826-SM-5EGJ2

2.3

GTEX-11ONC-1926-SM-5GU75

2.0

GTEX-13G51-2126-SM-5IJD9

1.6

GTEX-145MH-2726-SM-5QGQ6

1.6

GTEX-13CF2-1826-SM-5N9GK

1.5

GTEX-13OW8-2726-SM-5L3FZ

1.4

Show all

Colon - Transverse

Colon - Transverse
RPKM: 0.3

Samples: 196

Max RPKM: 2.2
Min RPKM: 0
Std RPKM: 0.2
Median RPKM: 0.2

GTEX-11WQK-2126-SM-5EQME

2.2

GTEX-X5EB-0926-SM-46MVT

1.4

GTEX-11GSP-1626-SM-5986N

1.2

GTEX-12ZZZ-2426-SM-5GCNN

1.1

GTEX-Z93S-2426-SM-5HL8N

1.1

GTEX-111YS-1626-SM-5GZZ9

0.9

GTEX-11TTK-2426-SM-5PNYO

0.9

GTEX-11TUW-2026-SM-5EQL8

0.9

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	0.2

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 0.2

FF:10014-101C5

62,83,84 years, mixed

0.2