Tissue expression of COL21A1 - Staining in heart muscle

HEART MUSCLE - Expression summary

Protein expression

RNA expression

HPA:	2.8	TPM
GTEx:	4.1	RPKM
FANTOM5:	17.5	Tags Per Million

HEART MUSCLE - Annotated protein expression

Annotated protein
expression

Myocytes:

High

Antibody staining	Antibody HPA031210	Antibody HPA031212	Antibody HPA031213
Myocytes	Medium	High	High

HEART MUSCLE - HPA RNA-seq

Average TPM	2.8

Female, age 48

Sample 1
TPM: 1.3

Cell types%

Myocytes: 15
Fibroblasts: 55
Endothelial cells: 25
Other cell types: 5

Female, age 42

Sample 2
TPM: 2.7

Cell types%

Myocytes: 20
Fibroblasts: 45
Endothelial cells: 30
Other cell types: 5

Male, age 53

Sample 3
TPM: 2.9

Cell types%

Myocytes: 20
Fibroblasts: 45
Endothelial cells: 30
Other cell types: 5

Female, age 69

Sample 4
TPM: 3.3

Cell types%

Myocytes: 20
Fibroblasts: 45
Endothelial cells: 30
Other cell types: 5

HEART MUSCLE - GTEx RNA-seq

Average RPKM	4.1

GTEx sample id

RPKM

Heart - Atrial Appendage

Heart - Atrial Appendage
RPKM: 3.8

Samples: 194

Max RPKM: 12.6
Min RPKM: 0.2
Std RPKM: 2.2
Median RPKM: 3.6

GTEX-UPK5-0226-SM-3GAEV

12.6

GTEX-1399T-0726-SM-5J1MH

11.9

GTEX-WRHU-1026-SM-4E3ID

11.2

GTEX-13O21-0326-SM-5J1N9

11.1

GTEX-13OVI-0326-SM-5K7X1

10.6

GTEX-ZVZQ-0726-SM-51MR3

9.5

GTEX-13PL6-0826-SM-5IJBI

9.3

GTEX-V1D1-0626-SM-4JBHN

9.1

Show all

Heart - Left Ventricle

Heart - Left Ventricle
RPKM: 4.3

Samples: 218

Max RPKM: 15
Min RPKM: 0.4
Std RPKM: 2.5
Median RPKM: 3.8

GTEX-ZLFU-0226-SM-4WWFH

15.0

GTEX-12696-1126-SM-5FQTI

13.2

GTEX-13U4I-0826-SM-5SIBD

11.2

GTEX-QEG4-0426-SM-33HC3

10.9

GTEX-12WSD-1126-SM-5EGJD

9.9

GTEX-X15G-0426-SM-4PQZ6

9.8

GTEX-13OW6-1126-SM-5L3HL

9.6

GTEX-RU72-0326-SM-2TF5T

9.6

Show all

HEART MUSCLE - FANTOM5 CAGE

Average Tags Per Million	17.5

FANTOM5 sample id

Sample description

Tags Per Million

Heart
Tags Per Million: 17.4

FF:10016-101C7

70,73,74 years, mixed

17.4

Left ventricle
Tags Per Million: 17.6

FF:10078-102A6

73 years, female

17.6