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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:118.1TPM
GTEx:129.2RPKM
FANTOM5:58.7Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA054359

 

Adipocytes

Not detected  

Glandular cells

Medium  

Myoepithelial cells

Medium  
 
 

BREAST - HPA RNA-seq

Average TPM

118.1

overview Female, age 52
Sample 1
TPM: 115.7
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 144.7
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 127.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 84.2
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

129.2

GTEx sample id

RPKM

106.3123.4144.953.2200.7050100150200250300350
 
106.3123.4144.953.2200.7050100150200250300350

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 129.2
Samples: 214

Max RPKM: 397.1
Min RPKM: 53.2
Std RPKM: 40
Median RPKM: 123.5
GTEX-14AS3-1626-SM-5S2OY 397.1
GTEX-14ABY-2126-SM-5QGQZ 329.5
GTEX-11TT1-2126-SM-5GU5Y 262.9
GTEX-145LT-0726-SM-5S2VM 240.2
GTEX-ZVT2-1826-SM-5NQ8W 239.0
GTEX-QEL4-2126-SM-447AE 222.0
GTEX-11ZTT-2326-SM-5EQLG 213.7
GTEX-13S86-1226-SM-5S2OA 210.4
GTEX-ZQG8-0726-SM-5P9H9 207.6
GTEX-ZTTD-1026-SM-51MRD 200.7
GTEX-11P82-1326-SM-5HL62 194.3
GTEX-ZAB4-2526-SM-5HL8M 187.0
GTEX-13FTW-1426-SM-5LZWZ 180.7
GTEX-ZYT6-0126-SM-5E45J 178.5
GTEX-132AR-0826-SM-5EGK6 177.9
GTEX-13CF3-2126-SM-5IFJP 177.4
GTEX-ZT9W-2026-SM-51MRA 175.1
GTEX-145MN-1926-SM-5SIAI 174.2
GTEX-ZLFU-2126-SM-4WWEV 173.1
GTEX-13NZ9-1026-SM-5MR5K 171.6
GTEX-13FTX-1126-SM-5N9EN 171.4
GTEX-XYKS-1326-SM-4BRUN 170.0
GTEX-YB5E-1726-SM-5IFJ3 167.9
GTEX-YB5K-1626-SM-5IFIN 167.9
GTEX-13NZB-2126-SM-5MR4Y 167.3
GTEX-139T6-1626-SM-5PNYZ 165.6
GTEX-11EQ9-1826-SM-5Q5AJ 164.1
GTEX-Y5V6-2126-SM-4WWFX 163.1
GTEX-ZZ64-1226-SM-5E43R 161.0
GTEX-117YX-1426-SM-5H12H 160.6
GTEX-1211K-1926-SM-5EQLB 160.6
GTEX-133LE-1726-SM-5K7VQ 157.2
GTEX-XQ3S-1326-SM-4BOPQ 156.5
GTEX-ZYFC-0826-SM-5E44K 155.6
GTEX-ZU9S-1926-SM-5NQBP 155.2
GTEX-146FH-0826-SM-5SI8T 154.9
GTEX-11P7K-0726-SM-5EGKX 154.6
GTEX-131XW-0726-SM-5EGK3 153.8
GTEX-12BJ1-1826-SM-5HL9N 153.4
GTEX-13NZ8-0126-SM-5IJCT 153.2
GTEX-145MO-0826-SM-5NQBL 152.8
GTEX-ZYWO-2326-SM-5GZY4 151.6
GTEX-11DZ1-0326-SM-5N9BN 151.0
GTEX-11ZUS-0826-SM-5FQUY 150.0
GTEX-ZPIC-1126-SM-5BC7F 150.0
GTEX-Y114-2026-SM-4TT7L 149.5
GTEX-11ONC-2126-SM-5HL6E 149.4
GTEX-S4Q7-1126-SM-4AD6R 147.8
GTEX-Y8E4-1626-SM-5S2MW 147.5
GTEX-12WSN-1326-SM-5GCNT 146.8
GTEX-ZV6S-1826-SM-5NQ8D 146.7
GTEX-13113-1726-SM-5GCOO 146.2
GTEX-131YS-0626-SM-5EGKL 145.8
GTEX-13PL6-2926-SM-5L3I2 145.5
GTEX-ZVTK-0326-SM-51MRR 143.2
GTEX-XMK1-1126-SM-4IHJ8 143.1
GTEX-YFCO-1826-SM-4W1YH 143.1
GTEX-13FHO-0826-SM-5L3E8 142.8
GTEX-13W3W-1226-SM-5LU4H 142.0
GTEX-ZAJG-0626-SM-5HL8X 141.6
GTEX-11O72-2126-SM-5N9FO 141.3
GTEX-12WSK-2226-SM-5GCO5 141.3
GTEX-1399U-1826-SM-5PNZ1 141.3
GTEX-11I78-2226-SM-5PNYA 140.8
GTEX-139TU-0626-SM-5KM3X 139.9
GTEX-ZVT4-1026-SM-57WC4 139.3
GTEX-WY7C-2726-SM-3NB3P 138.8
GTEX-ZQUD-1926-SM-51MSA 138.4
GTEX-1313W-0826-SM-5EQ4T 138.2
GTEX-145ME-1526-SM-5Q5F2 137.7
GTEX-ZLV1-1426-SM-4WWES 136.4
GTEX-ZDYS-1126-SM-5K7UB 136.2
GTEX-11WQC-1726-SM-5GU4W 135.2
GTEX-12WSM-1726-SM-5BC6J 134.5
GTEX-VUSG-2226-SM-4KKZO 134.3
GTEX-ZTX8-1226-SM-4YCE9 134.1
GTEX-13D11-1026-SM-5IJFB 134.0
GTEX-X4XY-0926-SM-4E3JD 134.0
GTEX-12KS4-0126-SM-5Q5A5 133.9
GTEX-11PRG-0826-SM-5EQ6A 133.8
GTEX-11DXZ-1926-SM-5GZZL 132.8
GTEX-ZA64-1526-SM-5CVMD 132.8
GTEX-S32W-2026-SM-4AD6E 131.9
GTEX-1122O-1226-SM-5H113 131.0
GTEX-Y5V5-2126-SM-4WWFO 131.0
GTEX-YFC4-1426-SM-5IFJG 130.4
GTEX-S7SE-0826-SM-4AT4D 129.7
GTEX-11GS4-2126-SM-5A5KR 129.3
GTEX-11EMC-2026-SM-5A5JV 129.2
GTEX-13O3O-0826-SM-5K7WE 129.0
GTEX-1192X-2326-SM-5987X 128.8
GTEX-11EI6-0626-SM-5985T 128.6
GTEX-YJ8O-2226-SM-5IFHW 126.9
GTEX-ZDXO-0126-SM-5S2ND 126.7
GTEX-QDT8-0626-SM-48TYW 126.6
GTEX-144GM-0926-SM-5O994 126.2
GTEX-147F4-2826-SM-5NQBN 125.9
GTEX-S33H-0326-SM-4AD6N 125.7
GTEX-11DXY-2326-SM-5GICW 125.4
GTEX-11NSD-0926-SM-5N9DR 125.2
GTEX-1314G-1226-SM-5BC6D 125.2
GTEX-11NV4-2026-SM-5N9DG 124.8
GTEX-11OF3-1926-SM-59889 124.8
GTEX-ZDTT-2126-SM-5S2OJ 124.5
GTEX-13N11-1726-SM-5J1OJ 123.9
GTEX-11TUW-1826-SM-5BC5D 123.8
GTEX-R55D-0826-SM-48FEA 123.6
GTEX-132NY-0826-SM-5K7Y7 123.3
GTEX-U8XE-0826-SM-4E3J1 123.3
GTEX-ZUA1-1526-SM-59HLS 123.3
GTEX-ZEX8-2226-SM-57WC6 123.1
GTEX-XMD2-0926-SM-4WWEF 122.5
GTEX-13O61-1826-SM-5KM4I 122.0
GTEX-12ZZX-1126-SM-5EGKB 121.9
GTEX-ZWKS-2826-SM-5NQ74 121.5
GTEX-14E6E-1326-SM-5S2NR 121.2
GTEX-Q2AG-0326-SM-48U1O 121.0
GTEX-ZY6K-1626-SM-5GZWV 120.6
GTEX-ZZPU-0626-SM-5E43T 120.3
GTEX-11GSO-1926-SM-5A5K3 119.4
GTEX-13PVQ-1026-SM-5KM3M 118.7
GTEX-Y9LG-1426-SM-5IFJZ 118.7
GTEX-11LCK-2426-SM-5HL5F 118.6
GTEX-11DXW-0626-SM-5N9ER 118.2
GTEX-ZXES-0826-SM-5E43C 118.2
GTEX-13O3P-0826-SM-5L3DH 118.1
GTEX-ZC5H-2626-SM-5J2MG 117.8
GTEX-13FTY-2226-SM-5J1ND 117.7
GTEX-WRHU-0326-SM-3MJFY 117.5
GTEX-XV7Q-2326-SM-4BRVZ 117.5
GTEX-YEC3-1026-SM-5IFI5 117.3
GTEX-REY6-2426-SM-48FF5 117.2
GTEX-PSDG-1626-SM-48TCQ 117.1
GTEX-13O3Q-2226-SM-5KM4O 116.8
GTEX-Y5LM-1726-SM-4VDSX 115.3
GTEX-XBED-1626-SM-47JYN 114.7
GTEX-R3RS-0626-SM-48FE1 114.2
GTEX-111YS-1926-SM-5GICC 113.6
GTEX-11P81-1926-SM-5BC53 113.3
GTEX-XUJ4-1926-SM-4BOOV 113.2
GTEX-1269C-2426-SM-5FQSN 112.9
GTEX-13OW5-2226-SM-5L3HC 112.8
GTEX-ZVZQ-0826-SM-51MRF 112.6
GTEX-ZYW4-0826-SM-5GIDG 112.2
GTEX-Y3IK-2326-SM-4WWDT 112.1
GTEX-13CF2-2026-SM-5K7VI 111.4
GTEX-ZF2S-2026-SM-5E461 111.3
GTEX-XUW1-2326-SM-4BOO5 111.0
GTEX-13OW8-0226-SM-5K7UP 110.9
GTEX-X15G-1626-SM-3NMB3 110.9
GTEX-11EM3-1326-SM-5N9C6 110.4
GTEX-T5JW-2026-SM-4DM63 109.0
GTEX-QEG5-0726-SM-4R1JQ 108.8
GTEX-S4UY-0726-SM-4AD6X 108.8
GTEX-ZVE2-1226-SM-5NQ8R 108.7
GTEX-139T8-0826-SM-5L3DE 108.2
GTEX-SE5C-2126-SM-4BRUJ 107.5
GTEX-XGQ4-0926-SM-4AT4U 107.0
GTEX-XOT4-0726-SM-4GIAW 106.8
GTEX-11WQK-2426-SM-5GU5C 106.5
GTEX-14753-2426-SM-5LU8U 106.3
GTEX-X4EP-2926-SM-3P5YQ 105.4
GTEX-WOFL-0826-SM-3MJG1 105.3
GTEX-QVJO-1826-SM-447C9 105.2
GTEX-RUSQ-2026-SM-4GIAK 105.2
GTEX-144GL-2026-SM-5LU3O 105.1
GTEX-XMD1-0826-SM-4AT52 104.9
GTEX-S341-1526-SM-4AD6K 103.7
GTEX-R53T-1526-SM-48FEK 103.5
GTEX-UTHO-1026-SM-3GAF7 103.1
GTEX-XUZC-1626-SM-4BRVP 103.0
GTEX-Y8LW-1626-SM-5IFHX 102.5
GTEX-13N1W-0626-SM-5MR4U 102.3
GTEX-WXYG-2226-SM-4E3IM 101.5
GTEX-QMRM-1626-SM-4R1KV 100.4
GTEX-WFON-1826-SM-3GILG 100.4
GTEX-12WSB-0626-SM-59HJO 100.2
GTEX-UPK5-2326-SM-3P5Z8 99.3
GTEX-1117F-2826-SM-5GZXL 96.6
GTEX-W5X1-2326-SM-3GIL6 95.1
GTEX-ZV7C-1826-SM-5NQ83 94.4
GTEX-X261-0626-SM-3NMD9 94.2
GTEX-132Q8-1426-SM-5EGK7 93.9
GTEX-Y3I4-1526-SM-4TT7K 93.9
GTEX-UJHI-1426-SM-3DB9C 93.4
GTEX-WYBS-0926-SM-3NM94 93.1
GTEX-WYJK-1326-SM-3NB2T 93.1
GTEX-U412-1826-SM-4DXTJ 92.9
GTEX-ZF3C-2326-SM-5S2MZ 92.7
GTEX-13W46-0826-SM-5LU3H 92.6
GTEX-U3ZN-1926-SM-4DXSG 92.0
GTEX-XQ8I-2426-SM-4WAXY 91.4
GTEX-117XS-1926-SM-5GICO 90.2
GTEX-S4P3-1326-SM-4AD6V 89.7
GTEX-WI4N-1426-SM-3LK7H 88.3
GTEX-T6MN-0726-SM-32PML 87.1
GTEX-T2YK-2226-SM-32QPT 86.5
GTEX-RU72-0626-SM-46MUI 86.3
GTEX-RWS6-1926-SM-47JXY 85.2
GTEX-T5JC-2126-SM-32PMO 83.4
GTEX-WYVS-1726-SM-3NMAY 83.4
GTEX-ZF29-1926-SM-5S2P1 83.1
GTEX-13QIC-2326-SM-5LU5N 81.6
GTEX-VJWN-0726-SM-3GIJ8 79.2
GTEX-U3ZH-1426-SM-4DXSR 75.1
GTEX-Y111-2026-SM-4SOJA 74.0
GTEX-TKQ2-1826-SM-33HB2 73.5
GTEX-R55F-1726-SM-2TF4R 73.4
GTEX-SIU7-1626-SM-4BRUK 73.4
GTEX-T2IS-1526-SM-32QPR 71.2
GTEX-TML8-1226-SM-32QON 69.9
GTEX-T6MO-0326-SM-32QOK 68.9
GTEX-TMMY-0726-SM-33HBE 57.1
GTEX-TKQ1-0226-SM-33HB5 53.2
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

58.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 58.7
FF:10080-102A8 77 years, female 58.7

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