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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:24.6RPKM
FANTOM5:77.8Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA039571

 

Antibody HPA039872

 

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

24.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 24.6
Samples: 117

Max RPKM: 43.6
Min RPKM: 12
Std RPKM: 7.1
Median RPKM: 24
GTEX-ZUA1-0011-R5b-SM-51MTG 43.6
GTEX-139T8-0011-R5b-SM-5J1MO 43.0
GTEX-12WSA-0011-R5b-SM-5GU5I 41.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 39.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 38.8
GTEX-T6MN-0011-R5A-SM-32QPD 38.0
GTEX-139TT-0011-R5b-SM-5K7W8 37.6
GTEX-X585-0011-R5A-SM-46MVI 37.3
GTEX-13FLW-0011-R5a-SM-5LZX6 36.5
GTEX-12WSC-0011-R5b-SM-5CVNS 35.8
GTEX-13X6K-0011-R5b-SM-5PNUE 35.6
GTEX-1399T-0011-R5b-SM-5IJDK 33.2
GTEX-11H98-0011-R5b-SM-57WCF 32.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 32.7
GTEX-14BIM-0011-R5b-SM-5S2RM 32.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 32.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 32.2
GTEX-11OF3-0011-R5a-SM-57WB4 31.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 31.9
GTEX-12WSB-0011-R5b-SM-5GU67 31.8
GTEX-13G51-0011-R5a-SM-5L3EB 30.8
GTEX-13JUV-0011-R5a-SM-5LZY5 30.4
GTEX-T5JC-0011-R5A-SM-32PLK 30.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 30.3
GTEX-131YS-0011-R5b-SM-5K7YB 30.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 29.8
GTEX-13FXS-0011-R5b-SM-5LZYE 29.5
GTEX-13NYB-0011-R5a-SM-5MR45 29.5
GTEX-13CZV-0011-R5a-SM-5K7XA 29.2
GTEX-132Q8-0011-R5a-SM-5IJDM 28.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 28.9
GTEX-11NV4-0011-R5a-SM-5NQ88 28.8
GTEX-1313W-0011-R5b-SM-5L3EP 28.5
GTEX-13CIG-0011-R5b-SM-5L3F2 28.4
GTEX-13NYS-0011-R5a-SM-5MR4D 28.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 28.3
GTEX-13VXU-0011-R5a-SM-5O9D7 28.2
GTEX-145MH-0011-R5a-SM-5P9JT 28.2
GTEX-XMD1-0011-R5A-SM-4AT47 27.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 27.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 27.6
GTEX-TSE9-0011-R5A-SM-3DB7J 27.3
GTEX-WL46-0011-R5A-SM-3LK6V 27.3
GTEX-13FLV-0011-R5a-SM-5LZWT 26.9
GTEX-XOTO-0011-R5A-SM-4B657 26.5
GTEX-R55E-0011-R5A-SM-2TC5N 26.2
GTEX-11GSP-0011-R5a-SM-57WBE 26.0
GTEX-13OVH-0011-R5b-SM-5KM4L 25.7
GTEX-RU72-0011-R5A-SM-2TF6U 25.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 25.4
GTEX-14ABY-0011-R5b-SM-5SI7B 25.4
GTEX-S7SE-0011-R5A-SM-2XCDA 25.3
GTEX-WVLH-0011-R5A-SM-3MJFW 25.3
GTEX-145LS-0011-R5a-SM-5SI65 25.0
GTEX-WWYW-0011-R5A-SM-3NB3E 24.6
GTEX-13SLX-0011-R5a-SM-5O9BV 24.4
GTEX-Z93S-0011-R5b-SM-4RGNI 24.2
GTEX-13O3O-0011-R5b-SM-5KM44 24.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 24.0
GTEX-13JVG-0011-R5a-SM-5MR4O 23.9
GTEX-13X6I-0011-R5a-SM-5PNWW 23.9
GTEX-RVPV-0011-R5A-SM-2TF69 23.8
GTEX-X4XX-0011-R5A-SM-46MWN 23.5
GTEX-ZE7O-0011-R5a-SM-57WBO 23.2
GTEX-N7MS-0011-R5a-SM-2HMK8 23.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 22.8
GTEX-12WSF-0011-R5a-SM-5HL8K 22.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 22.7
GTEX-13X6J-0011-R5b-SM-5PNWT 22.6
GTEX-ZV68-0011-R5a-SM-4YCDW 22.6
GTEX-13OW5-0011-R5b-SM-5L3FR 22.5
GTEX-YJ89-0011-R5a-SM-4V6GM 22.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 22.1
GTEX-X261-0011-R5A-SM-3NMB4 22.1
GTEX-WZTO-0011-R5B-SM-3NMC5 21.9
GTEX-ZXG5-0011-R5b-SM-57WBN 21.8
GTEX-12WSD-0011-R5b-SM-5CVNG 21.5
GTEX-N7MT-0011-R5a-SM-2I3G6 21.5
GTEX-139TS-0011-R5b-SM-5J2MZ 21.1
GTEX-12WSH-0011-R5b-SM-5P9F3 20.9
GTEX-ZVT3-0011-R5a-SM-51MSI 20.5
GTEX-13OW6-0011-R5a-SM-5O9BK 20.2
GTEX-UTHO-0011-R5A-SM-3GIJD 20.1
GTEX-13OVL-0011-R5b-SM-5L3FU 19.9
GTEX-13S7M-0011-R5b-SM-5P9HS 19.6
GTEX-QVJO-0011-R5A-SM-2S1QM 19.6
GTEX-13OW7-0011-R5b-SM-5O9DM 19.2
GTEX-11WQC-0011-R5a-SM-5BC74 18.8
GTEX-1445S-0011-R5a-SM-5PNUS 18.8
GTEX-144GO-0011-R5a-SM-5PNUR 18.8
GTEX-P44H-0011-R5A-SM-2XCEX 18.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 18.7
GTEX-YFC4-0011-R5a-SM-4RGLR 18.1
GTEX-NPJ7-0011-R5a-SM-33HBK 17.9
GTEX-13FHP-0011-R5b-SM-5LZY2 17.5
GTEX-14BIN-0011-R5b-SM-5SI78 17.4
GTEX-OHPN-0011-R5A-SM-2I5FF 17.2
GTEX-13112-0011-R5b-SM-5DUV8 17.1
GTEX-12ZZX-0011-R5a-SM-5HL89 16.9
GTEX-NL3H-0011-R5a-SM-2I3GB 16.6
GTEX-QMR6-0011-R5A-SM-32PKT 16.6
GTEX-144GL-0011-R5b-SM-5PNUJ 16.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 16.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 15.8
GTEX-11UD1-0011-R5b-SM-5P9FP 15.7
GTEX-NL4W-0011-R5a-SM-2I3GD 15.4
GTEX-RVPU-0011-R5A-SM-2XCAD 15.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 15.2
GTEX-13CF2-0011-R5a-SM-5LZWS 14.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 14.4
GTEX-PVOW-0011-R5A-SM-32PL7 13.8
GTEX-OXRN-0011-R5A-SM-2I5EF 13.7
GTEX-1477Z-0011-R5b-SM-5PNUO 13.6
GTEX-145MG-0011-R5b-SM-5S2VU 13.5
GTEX-T2IS-0011-R5A-SM-32QP4 12.1
GTEX-13NZA-0011-R5b-SM-5KM4K 12.0
GTEX-S7PM-0011-R5A-SM-3NM8G 12.0
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

77.8

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 77.8
FF:10379-105H1 89 years, female 103.9
FF:10164-103B2 76 years, female 51.8

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