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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:38.8TPM
GTEx:27.8RPKM
FANTOM5:36.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA010649

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA010649

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

38.8
N/A Female, age 80
Sample 1
TPM: 58.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 35.5
N/A Female, age 57
Sample 3
TPM: 35.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 39.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 25.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

27.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 26.8
Samples: 350

Max RPKM: 51.8
Min RPKM: 13.4
Std RPKM: 5.1
Median RPKM: 26.4
GTEX-Y5V6-2526-SM-5IFJV 51.8
GTEX-POMQ-2326-SM-5S2VS 42.7
GTEX-ZP4G-2326-SM-57WEM 42.2
GTEX-1399U-2426-SM-5K7XB 41.5
GTEX-ZQG8-1526-SM-5HL65 39.2
GTEX-145MN-2626-SM-5NQAH 38.3
GTEX-YB5E-2126-SM-5IFI7 37.7
GTEX-13RTJ-2526-SM-5S2Q3 37.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 29.3
Samples: 227

Max RPKM: 64.9
Min RPKM: 11.7
Std RPKM: 6.9
Median RPKM: 28.3
GTEX-13X6H-1726-SM-5Q5EH 64.9
GTEX-1399S-1426-SM-5PNYQ 59.8
GTEX-Y5LM-0826-SM-4VDSW 59.6
GTEX-1339X-0726-SM-5L3FF 45.5
GTEX-U8XE-1926-SM-3DB98 44.9
GTEX-1122O-0926-SM-5N9C9 44.6
GTEX-131XG-0126-SM-5K7UJ 44.3
GTEX-13FH7-1926-SM-5J2OL 43.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

36.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 36.2
FF:10010-101C1 65,65,76 years, mixed 36.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.