Expression of LRFN3 in cancer - Summary

CANCER ATLAS

Gene description

Leucine rich repeat and fibronectin type III domain containing 3

Protein class

Predicted membrane proteins

Protein evidence

Evidence at transcript level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA048923

GENE INFORMATION
Gene name	LRFN3 (HGNC Symbol)
Synonyms	FIGLER1, MGC2656, SALM4
Description	Leucine rich repeat and fibronectin type III domain containing 3 (HGNC Symbol)
Entrez gene summary
Chromosome	19
Cytoband	q13.12
Chromosome location (bp)	35935358 - 35945767
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000126243 (version 83.38)
Entrez gene	79414
UniProt	Q9BTN0 (UniProt - Evidence at transcript level)
neXtProt	NX_Q9BTN0
Antibodypedia	LRFN3 antibodies

PROTEIN BROWSER

LRFN3-001	LRFN3-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
LRFN3-001 ENSP00000466989 ENST00000588831	Q9BTN0 [Direct mapping] Leucine-rich repeat and fibronectin type-III domain-containing protein 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005515 [protein binding] GO:0007155 [cell adhesion] GO:0007409 [axonogenesis] GO:0009986 [cell surface] GO:0016021 [integral component of membrane] GO:0030054 [cell junction] GO:0030424 [axon] GO:0030425 [dendrite] GO:0042734 [presynaptic membrane] GO:0045211 [postsynaptic membrane] Show all	628 aa 66.3 kDa	Yes	1
LRFN3-201 ENSP00000246529 ENST00000246529	Q9BTN0 [Direct mapping] Leucine-rich repeat and fibronectin type-III domain-containing protein 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005515 [protein binding] GO:0007155 [cell adhesion] GO:0007409 [axonogenesis] GO:0016021 [integral component of membrane] GO:0030054 [cell junction] GO:0030424 [axon] GO:0030425 [dendrite] GO:0042734 [presynaptic membrane] GO:0045211 [postsynaptic membrane] Show all	628 aa 66.3 kDa	Yes	1