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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:174.4TPM
GTEx:121.3RPKM
FANTOM5:77.0Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Medium
Myoepithelial cells:Medium
 
 

Antibody staining

Antibody HPA037915

 

Antibody HPA037916

 

Antibody CAB008661

 

Adipocytes

Low   Not detected   Not detected  

Glandular cells

Medium   Medium   Medium  

Myoepithelial cells

Medium   Low  
        
     
     
     

BREAST - HPA RNA-seq

Average TPM

174.4

overview Female, age 52
Sample 1
TPM: 220.9
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 209.8
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 169.9
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 96.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

121.3

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 121.3
Samples: 214

Max RPKM: 259.2
Min RPKM: 56.9
Std RPKM: 29
Median RPKM: 120.4
GTEX-14ABY-2126-SM-5QGQZ 259.2
GTEX-14AS3-1626-SM-5S2OY 257.3
GTEX-ZVT2-1826-SM-5NQ8W 210.7
GTEX-145LT-0726-SM-5S2VM 205.9
GTEX-11TT1-2126-SM-5GU5Y 199.5
GTEX-13PL6-2926-SM-5L3I2 198.7
GTEX-ZAB4-2526-SM-5HL8M 191.5
GTEX-XYKS-1326-SM-4BRUN 191.2
GTEX-13D11-1026-SM-5IJFB 185.3
GTEX-13NZ9-1026-SM-5MR5K 177.5
GTEX-X15G-1626-SM-3NMB3 175.3
GTEX-139TU-0626-SM-5KM3X 165.9
GTEX-13NZB-2126-SM-5MR4Y 164.9
GTEX-131XW-0726-SM-5EGK3 163.2
GTEX-12ZZX-1126-SM-5EGKB 162.4
GTEX-133LE-1726-SM-5K7VQ 159.7
GTEX-YFC4-1426-SM-5IFJG 156.9
GTEX-1399U-1826-SM-5PNZ1 156.5
GTEX-131YS-0626-SM-5EGKL 154.4
GTEX-XUZC-1626-SM-4BRVP 153.1
GTEX-11EQ9-1826-SM-5Q5AJ 152.9
GTEX-13FTY-2226-SM-5J1ND 152.8
GTEX-ZAJG-0626-SM-5HL8X 152.6
GTEX-ZXES-0826-SM-5E43C 151.9
GTEX-XMD2-0926-SM-4WWEF 151.1
GTEX-11EMC-2026-SM-5A5JV 148.2
GTEX-11WQC-1726-SM-5GU4W 146.5
GTEX-XMK1-1126-SM-4IHJ8 146.2
GTEX-S341-1526-SM-4AD6K 145.1
GTEX-R3RS-0626-SM-48FE1 144.9
GTEX-U3ZN-1926-SM-4DXSG 144.9
GTEX-T5JW-2026-SM-4DM63 144.8
GTEX-X4EP-2926-SM-3P5YQ 143.5
GTEX-11EM3-1326-SM-5N9C6 143.4
GTEX-S4UY-0726-SM-4AD6X 142.1
GTEX-ZLV1-1426-SM-4WWES 142.1
GTEX-ZEX8-2226-SM-57WC6 141.5
GTEX-UJHI-1426-SM-3DB9C 140.3
GTEX-XQ3S-1326-SM-4BOPQ 139.8
GTEX-ZC5H-2626-SM-5J2MG 139.2
GTEX-VUSG-2226-SM-4KKZO 138.8
GTEX-ZYT6-0126-SM-5E45J 138.8
GTEX-ZYWO-2326-SM-5GZY4 138.7
GTEX-11P7K-0726-SM-5EGKX 138.5
GTEX-QDT8-0626-SM-48TYW 136.9
GTEX-Y5V6-2126-SM-4WWFX 136.9
GTEX-13N11-1726-SM-5J1OJ 136.8
GTEX-Y5LM-1726-SM-4VDSX 136.7
GTEX-S33H-0326-SM-4AD6N 136.2
GTEX-1192X-2326-SM-5987X 136.1
GTEX-SE5C-2126-SM-4BRUJ 136.1
GTEX-132AR-0826-SM-5EGK6 134.6
GTEX-11PRG-0826-SM-5EQ6A 133.4
GTEX-13W3W-1226-SM-5LU4H 133.2
GTEX-13S86-1226-SM-5S2OA 133.1
GTEX-13O3P-0826-SM-5L3DH 132.5
GTEX-WY7C-2726-SM-3NB3P 132.2
GTEX-13O3O-0826-SM-5K7WE 131.6
GTEX-ZU9S-1926-SM-5NQBP 131.6
GTEX-WXYG-2226-SM-4E3IM 130.6
GTEX-11I78-2226-SM-5PNYA 130.4
GTEX-YB5K-1626-SM-5IFIN 130.4
GTEX-PSDG-1626-SM-48TCQ 130.2
GTEX-11DZ1-0326-SM-5N9BN 130.1
GTEX-Y114-2026-SM-4TT7L 130.0
GTEX-Y8E4-1626-SM-5S2MW 129.6
GTEX-Y3IK-2326-SM-4WWDT 129.5
GTEX-139T6-1626-SM-5PNYZ 129.1
GTEX-13NZ8-0126-SM-5IJCT 128.4
GTEX-ZVTK-0326-SM-51MRR 128.4
GTEX-XV7Q-2326-SM-4BRVZ 128.3
GTEX-S4Q7-1126-SM-4AD6R 128.0
GTEX-XUJ4-1926-SM-4BOOV 127.9
GTEX-XMD1-0826-SM-4AT52 127.6
GTEX-Y5V5-2126-SM-4WWFO 126.4
GTEX-139T8-0826-SM-5L3DE 126.2
GTEX-117YX-1426-SM-5H12H 126.1
GTEX-U8XE-0826-SM-4E3J1 125.7
GTEX-11NSD-0926-SM-5N9DR 125.5
GTEX-13FTW-1426-SM-5LZWZ 125.1
GTEX-11DXY-2326-SM-5GICW 124.9
GTEX-YFCO-1826-SM-4W1YH 124.6
GTEX-132NY-0826-SM-5K7Y7 124.5
GTEX-ZF2S-2026-SM-5E461 124.5
GTEX-145MN-1926-SM-5SIAI 124.4
GTEX-11EI6-0626-SM-5985T 123.9
GTEX-UTHO-1026-SM-3GAF7 123.9
GTEX-ZTX8-1226-SM-4YCE9 123.8
GTEX-ZTTD-1026-SM-51MRD 123.7
GTEX-T2IS-1526-SM-32QPR 123.3
GTEX-1117F-2826-SM-5GZXL 123.1
GTEX-WYVS-1726-SM-3NMAY 123.0
GTEX-ZVE2-1226-SM-5NQ8R 122.7
GTEX-Q2AG-0326-SM-48U1O 122.6
GTEX-11ZUS-0826-SM-5FQUY 122.5
GTEX-12BJ1-1826-SM-5HL9N 122.5
GTEX-WRHU-0326-SM-3MJFY 122.4
GTEX-ZY6K-1626-SM-5GZWV 122.2
GTEX-ZYFC-0826-SM-5E44K 122.2
GTEX-ZVZQ-0826-SM-51MRF 121.8
GTEX-13FHO-0826-SM-5L3E8 121.7
GTEX-YB5E-1726-SM-5IFJ3 121.2
GTEX-ZZPU-0626-SM-5E43T 121.1
GTEX-ZQUD-1926-SM-51MSA 120.9
GTEX-QVJO-1826-SM-447C9 120.8
GTEX-12KS4-0126-SM-5Q5A5 120.5
GTEX-WOFL-0826-SM-3MJG1 120.5
GTEX-XGQ4-0926-SM-4AT4U 120.4
GTEX-1269C-2426-SM-5FQSN 120.0
GTEX-WYBS-0926-SM-3NM94 119.3
GTEX-X4XY-0926-SM-4E3JD 119.2
GTEX-ZDXO-0126-SM-5S2ND 119.1
GTEX-ZPIC-1126-SM-5BC7F 118.4
GTEX-13113-1726-SM-5GCOO 118.3
GTEX-13CF3-2126-SM-5IFJP 118.3
GTEX-11GS4-2126-SM-5A5KR 117.8
GTEX-1211K-1926-SM-5EQLB 117.6
GTEX-11OF3-1926-SM-59889 117.1
GTEX-1313W-0826-SM-5EQ4T 117.1
GTEX-11P81-1926-SM-5BC53 117.0
GTEX-11NV4-2026-SM-5N9DG 115.7
GTEX-S7SE-0826-SM-4AT4D 115.6
GTEX-XUW1-2326-SM-4BOO5 115.1
GTEX-RWS6-1926-SM-47JXY 114.9
GTEX-147F4-2826-SM-5NQBN 114.6
GTEX-11LCK-2426-SM-5HL5F 114.4
GTEX-RU72-0626-SM-46MUI 114.3
GTEX-11DXZ-1926-SM-5GZZL 113.9
GTEX-13O3Q-2226-SM-5KM4O 113.9
GTEX-13CF2-2026-SM-5K7VI 113.3
GTEX-R53T-1526-SM-48FEK 113.2
GTEX-S4P3-1326-SM-4AD6V 113.2
GTEX-WI4N-1426-SM-3LK7H 113.1
GTEX-QEL4-2126-SM-447AE 112.7
GTEX-ZDYS-1126-SM-5K7UB 111.9
GTEX-1122O-1226-SM-5H113 111.7
GTEX-13QIC-2326-SM-5LU5N 111.5
GTEX-XOT4-0726-SM-4GIAW 110.8
GTEX-UPK5-2326-SM-3P5Z8 110.7
GTEX-11ZTT-2326-SM-5EQLG 110.5
GTEX-132Q8-1426-SM-5EGK7 110.2
GTEX-ZVT4-1026-SM-57WC4 110.1
GTEX-146FH-0826-SM-5SI8T 109.5
GTEX-12WSK-2226-SM-5GCO5 108.6
GTEX-XQ8I-2426-SM-4WAXY 108.4
GTEX-ZZ64-1226-SM-5E43R 108.3
GTEX-S32W-2026-SM-4AD6E 108.1
GTEX-ZUA1-1526-SM-59HLS 108.0
GTEX-ZQG8-0726-SM-5P9H9 107.7
GTEX-ZV6S-1826-SM-5NQ8D 107.6
GTEX-11ONC-2126-SM-5HL6E 105.1
GTEX-SIU7-1626-SM-4BRUK 105.1
GTEX-Y3I4-1526-SM-4TT7K 104.2
GTEX-12WSN-1326-SM-5GCNT 104.0
GTEX-144GL-2026-SM-5LU3O 104.0
GTEX-QMRM-1626-SM-4R1KV 104.0
GTEX-13FTX-1126-SM-5N9EN 103.9
GTEX-11DXW-0626-SM-5N9ER 103.4
GTEX-ZYW4-0826-SM-5GIDG 103.1
GTEX-U3ZH-1426-SM-4DXSR 102.9
GTEX-ZT9W-2026-SM-51MRA 102.2
GTEX-12WSB-0626-SM-59HJO 102.0
GTEX-145MO-0826-SM-5NQBL 101.9
GTEX-11P82-1326-SM-5HL62 101.5
GTEX-WYJK-1326-SM-3NB2T 101.3
GTEX-11O72-2126-SM-5N9FO 100.2
GTEX-XBED-1626-SM-47JYN 100.1
GTEX-1314G-1226-SM-5BC6D 99.7
GTEX-T2YK-2226-SM-32QPT 99.5
GTEX-VJWN-0726-SM-3GIJ8 99.4
GTEX-ZA64-1526-SM-5CVMD 99.1
GTEX-11GSO-1926-SM-5A5K3 98.8
GTEX-ZWKS-2826-SM-5NQ74 97.9
GTEX-QEG5-0726-SM-4R1JQ 97.8
GTEX-ZLFU-2126-SM-4WWEV 97.8
GTEX-Y9LG-1426-SM-5IFJZ 97.5
GTEX-T6MN-0726-SM-32PML 96.6
GTEX-T6MO-0326-SM-32QOK 95.6
GTEX-R55D-0826-SM-48FEA 95.1
GTEX-ZV7C-1826-SM-5NQ83 94.8
GTEX-ZF29-1926-SM-5S2P1 94.6
GTEX-13OW5-2226-SM-5L3HC 93.9
GTEX-13W46-0826-SM-5LU3H 93.6
GTEX-144GM-0926-SM-5O994 93.4
GTEX-TML8-1226-SM-32QON 93.4
GTEX-Y8LW-1626-SM-5IFHX 92.8
GTEX-YJ8O-2226-SM-5IFHW 92.3
GTEX-13N1W-0626-SM-5MR4U 92.2
GTEX-ZDTT-2126-SM-5S2OJ 92.2
GTEX-REY6-2426-SM-48FF5 92.1
GTEX-ZF3C-2326-SM-5S2MZ 91.8
GTEX-X261-0626-SM-3NMD9 90.6
GTEX-111YS-1926-SM-5GICC 88.5
GTEX-13OW8-0226-SM-5K7UP 87.8
GTEX-U412-1826-SM-4DXTJ 86.6
GTEX-14E6E-1326-SM-5S2NR 85.7
GTEX-14753-2426-SM-5LU8U 85.4
GTEX-Y111-2026-SM-4SOJA 84.3
GTEX-TMMY-0726-SM-33HBE 83.6
GTEX-WFON-1826-SM-3GILG 82.6
GTEX-YEC3-1026-SM-5IFI5 82.4
GTEX-13PVQ-1026-SM-5KM3M 81.3
GTEX-13O61-1826-SM-5KM4I 80.9
GTEX-W5X1-2326-SM-3GIL6 80.7
GTEX-R55F-1726-SM-2TF4R 80.5
GTEX-12WSM-1726-SM-5BC6J 80.0
GTEX-RUSQ-2026-SM-4GIAK 79.1
GTEX-TKQ1-0226-SM-33HB5 78.5
GTEX-117XS-1926-SM-5GICO 77.9
GTEX-145ME-1526-SM-5Q5F2 77.0
GTEX-11TUW-1826-SM-5BC5D 71.7
GTEX-TKQ2-1826-SM-33HB2 71.3
GTEX-11WQK-2426-SM-5GU5C 68.1
GTEX-T5JC-2126-SM-32PMO 56.9
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

77.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 77.0
FF:10080-102A8 77 years, female 77.0

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