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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:166.5RPKM
FANTOM5:220.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA037915

 

Antibody HPA037916

 

Antibody CAB008661

 

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Medium   Medium  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

166.5

GTEx sample id

RPKM

133.1165.3194.664.1266.9050100150200250300350
 
133.1165.3194.664.1266.9050100150200250300350

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 166.5
Samples: 117

Max RPKM: 378.4
Min RPKM: 64.1
Std RPKM: 53.7
Median RPKM: 165.3
GTEX-139TT-0011-R5b-SM-5K7W8 378.4
GTEX-132Q8-0011-R5a-SM-5IJDM 290.3
GTEX-12WSA-0011-R5b-SM-5GU5I 288.0
GTEX-1399T-0011-R5b-SM-5IJDK 266.9
GTEX-XMD1-0011-R5A-SM-4AT47 264.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 264.3
GTEX-ZUA1-0011-R5b-SM-51MTG 263.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 243.3
GTEX-13X6K-0011-R5b-SM-5PNUE 243.3
GTEX-13G51-0011-R5a-SM-5L3EB 237.8
GTEX-11OF3-0011-R5a-SM-57WB4 236.2
GTEX-12WSC-0011-R5b-SM-5CVNS 234.8
GTEX-X585-0011-R5A-SM-46MVI 233.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 231.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 230.0
GTEX-T6MN-0011-R5A-SM-32QPD 228.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 228.2
GTEX-13OW6-0011-R5a-SM-5O9BK 224.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 223.6
GTEX-1313W-0011-R5b-SM-5L3EP 219.2
GTEX-145MH-0011-R5a-SM-5P9JT 211.7
GTEX-N7MT-0011-R5a-SM-2I3G6 210.9
GTEX-139TS-0011-R5b-SM-5J2MZ 207.2
GTEX-QVJO-0011-R5A-SM-2S1QM 206.4
GTEX-13JUV-0011-R5a-SM-5LZY5 204.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 201.6
GTEX-13VXU-0011-R5a-SM-5O9D7 199.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 198.9
GTEX-13NYS-0011-R5a-SM-5MR4D 195.6
GTEX-N7MS-0011-R5a-SM-2HMK8 194.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 193.3
GTEX-131YS-0011-R5b-SM-5K7YB 191.1
GTEX-14BIM-0011-R5b-SM-5S2RM 190.5
GTEX-11NV4-0011-R5a-SM-5NQ88 190.3
GTEX-13X6J-0011-R5b-SM-5PNWT 187.2
GTEX-145LS-0011-R5a-SM-5SI65 185.8
GTEX-RU72-0011-R5A-SM-2TF6U 185.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 185.3
GTEX-13X6I-0011-R5a-SM-5PNWW 183.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 183.7
GTEX-13NYB-0011-R5a-SM-5MR45 183.4
GTEX-12WSB-0011-R5b-SM-5GU67 182.8
GTEX-TSE9-0011-R5A-SM-3DB7J 182.2
GTEX-11H98-0011-R5b-SM-57WCF 181.7
GTEX-S7SE-0011-R5A-SM-2XCDA 181.6
GTEX-12WSF-0011-R5a-SM-5HL8K 181.4
GTEX-WWYW-0011-R5A-SM-3NB3E 180.6
GTEX-R55E-0011-R5A-SM-2TC5N 176.1
GTEX-11GSP-0011-R5a-SM-57WBE 175.7
GTEX-13CZV-0011-R5a-SM-5K7XA 175.1
GTEX-14ABY-0011-R5b-SM-5SI7B 174.2
GTEX-WVLH-0011-R5A-SM-3MJFW 173.0
GTEX-13FLV-0011-R5a-SM-5LZWT 172.0
GTEX-144GO-0011-R5a-SM-5PNUR 172.0
GTEX-12WSD-0011-R5b-SM-5CVNG 171.7
GTEX-13S7M-0011-R5b-SM-5P9HS 169.1
GTEX-13FXS-0011-R5b-SM-5LZYE 166.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 166.3
GTEX-ZE7O-0011-R5a-SM-57WBO 165.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 165.0
GTEX-13OVH-0011-R5b-SM-5KM4L 164.4
GTEX-13O3O-0011-R5b-SM-5KM44 163.1
GTEX-OHPN-0011-R5A-SM-2I5FF 161.4
GTEX-13OVL-0011-R5b-SM-5L3FU 159.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 159.1
GTEX-WZTO-0011-R5B-SM-3NMC5 155.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 155.6
GTEX-Z93S-0011-R5b-SM-4RGNI 154.7
GTEX-WL46-0011-R5A-SM-3LK6V 154.2
GTEX-13SLX-0011-R5a-SM-5O9BV 152.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 152.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 152.4
GTEX-YFC4-0011-R5a-SM-4RGLR 151.8
GTEX-13FLW-0011-R5a-SM-5LZX6 149.8
GTEX-XOTO-0011-R5A-SM-4B657 149.3
GTEX-UTHO-0011-R5A-SM-3GIJD 143.4
GTEX-13JVG-0011-R5a-SM-5MR4O 143.2
GTEX-13OW5-0011-R5b-SM-5L3FR 142.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 142.5
GTEX-13OW7-0011-R5b-SM-5O9DM 141.3
GTEX-RVPV-0011-R5A-SM-2TF69 140.6
GTEX-X4XX-0011-R5A-SM-46MWN 140.6
GTEX-NL4W-0011-R5a-SM-2I3GD 139.8
GTEX-12ZZX-0011-R5a-SM-5HL89 135.8
GTEX-NL3H-0011-R5a-SM-2I3GB 135.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 134.9
GTEX-13CIG-0011-R5b-SM-5L3F2 133.2
GTEX-ZXG5-0011-R5b-SM-57WBN 133.1
GTEX-RVPU-0011-R5A-SM-2XCAD 130.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 129.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 123.5
GTEX-X261-0011-R5A-SM-3NMB4 119.5
GTEX-P44H-0011-R5A-SM-2XCEX 117.4
GTEX-ZV68-0011-R5a-SM-4YCDW 115.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 113.3
GTEX-139T8-0011-R5b-SM-5J1MO 111.9
GTEX-T5JC-0011-R5A-SM-32PLK 111.3
GTEX-12WSH-0011-R5b-SM-5P9F3 108.5
GTEX-T2IS-0011-R5A-SM-32QP4 106.8
GTEX-11WQC-0011-R5a-SM-5BC74 106.7
GTEX-YJ89-0011-R5a-SM-4V6GM 106.6
GTEX-ZVT3-0011-R5a-SM-51MSI 104.2
GTEX-14BIN-0011-R5b-SM-5SI78 103.6
GTEX-1445S-0011-R5a-SM-5PNUS 102.2
GTEX-NPJ7-0011-R5a-SM-33HBK 100.7
GTEX-OXRN-0011-R5A-SM-2I5EF 95.3
GTEX-144GL-0011-R5b-SM-5PNUJ 95.1
GTEX-13112-0011-R5b-SM-5DUV8 94.8
GTEX-13CF2-0011-R5a-SM-5LZWS 93.9
GTEX-PVOW-0011-R5A-SM-32PL7 92.8
GTEX-QMR6-0011-R5A-SM-32PKT 91.3
GTEX-11UD1-0011-R5b-SM-5P9FP 84.1
GTEX-13FHP-0011-R5b-SM-5LZY2 73.5
GTEX-13NZA-0011-R5b-SM-5KM4K 73.3
GTEX-S7PM-0011-R5A-SM-3NM8G 70.3
GTEX-1477Z-0011-R5b-SM-5PNUO 68.7
GTEX-145MG-0011-R5b-SM-5S2VU 64.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

220.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 220.1
FF:10379-105H1 89 years, female 259.0
FF:10164-103B2 76 years, female 181.2

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