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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:338.9TPM
GTEx:213.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA037915

 

Antibody HPA037916

 

Antibody CAB008661

 

Endothelial cells

Not detected   Low   Not detected  

Glial cells

Not detected   Low   Not detected  

Neuronal cells

Not detected   Medium   High  

Neuropil

Medium   Medium   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

338.9

N/A Male, age 5
Sample 1
TPM: 402.6
overview Female, age 40
Sample 2
TPM: 267.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 346.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

213.6

GTEx sample id

RPKM

176.1213.1232.4105.1275.9050100150200250300
 
176.1213.1232.4105.1275.9050100150200250300

Brain - Cortex

Brain - Cortex
RPKM: 202.9
Samples: 114

Max RPKM: 335.1
Min RPKM: 105.1
Std RPKM: 42.3
Median RPKM: 213.1
GTEX-11OC5-0726-SM-5P9JK 335.1
GTEX-12WSC-3026-SM-5GCNF 275.9
GTEX-YJ89-3026-SM-5IFJI 268.1
GTEX-WVLH-3026-SM-3MJG9 265.1
GTEX-13O3Q-2926-SM-5KM45 261.5
GTEX-14BMV-3026-SM-5S2PQ 259.9
GTEX-ZE7O-3126-SM-5HL5X 259.6
GTEX-13SLX-3126-SM-5S2Q5 257.7
GTEX-145MG-3026-SM-5RQJA 255.4
GTEX-117XS-3026-SM-5N9CA 254.6
GTEX-13VXU-2926-SM-5LU5C 254.1
GTEX-13FXS-3126-SM-5J2NN 252.6
GTEX-12126-1026-SM-5P9JJ 250.1
GTEX-1399T-3026-SM-5KLZC 250.0
GTEX-11DXY-3226-SM-5GIDE 249.9
GTEX-X585-3026-SM-46MWF 249.5
GTEX-QVJO-1426-SM-2S1QY 248.1
GTEX-1313W-3126-SM-5LZUI 244.6
GTEX-13O3O-3126-SM-5KM3H 240.7
GTEX-Z93S-2926-SM-57WB9 239.6
GTEX-11GSO-2926-SM-5HL73 239.4
GTEX-ZYFD-3026-SM-5E44C 237.8
GTEX-WL46-2926-SM-3LK82 237.2
GTEX-12ZZW-2926-SM-5LZUP 236.1
GTEX-Y111-2726-SM-4TT3N 236.0
GTEX-145MH-3026-SM-5Q5DZ 235.3
GTEX-Y8DK-0826-SM-4TT3T 234.9
GTEX-Q2AG-2926-SM-2HMJ3 233.0
GTEX-13OW6-3026-SM-5J2MI 232.6
GTEX-13JUV-2926-SM-5LZX7 232.0
GTEX-11PRG-2926-SM-5987A 231.4
GTEX-13FLW-1426-SM-5K7YE 231.3
GTEX-ZVT3-3026-SM-5E43N 229.1
GTEX-13OVH-3026-SM-5MR4N 228.3
GTEX-X4XX-3026-SM-3NMB2 228.1
GTEX-145LS-3126-SM-5Q5BY 225.8
GTEX-13OW8-2826-SM-5L3GC 225.2
GTEX-11NV4-2126-SM-5N9DS 224.6
GTEX-RU72-3026-SM-5SI7Y 223.8
GTEX-13NYB-3026-SM-5IJD7 223.1
GTEX-T6MN-2626-SM-32PMQ 222.4
GTEX-12ZZX-2926-SM-5GCOQ 221.8
GTEX-12ZZY-3026-SM-5GCOU 221.7
GTEX-XOTO-3026-SM-4B65M 219.7
GTEX-13NYS-3126-SM-5KLYV 219.2
GTEX-1192X-3126-SM-5N9BY 218.6
GTEX-WZTO-2926-SM-3NM9I 216.5
GTEX-11NUK-2926-SM-5A5MD 216.3
GTEX-144GL-3026-SM-5Q5CW 216.3
GTEX-145MF-2726-SM-5O995 216.2
GTEX-WHSE-3026-SM-3P5ZH 215.8
GTEX-131YS-3126-SM-5KLYT 215.4
GTEX-WWYW-3126-SM-3NB39 215.4
GTEX-R55F-1326-SM-5S2V4 215.3
GTEX-11DXW-1126-SM-5H12Q 214.8
GTEX-YFC4-3126-SM-5PNV6 214.8
GTEX-13X6J-3026-SM-5Q5CU 213.2
GTEX-14ASI-3026-SM-5S2PN 213.0
GTEX-11OF3-2926-SM-5HL78 212.9
GTEX-ZAK1-3026-SM-5S2MJ 212.2
GTEX-11ZUS-2926-SM-5FQSL 209.6
GTEX-13NYC-2826-SM-5K7WR 209.1
GTEX-ZUA1-3026-SM-59HJC 208.7
GTEX-11ONC-2926-SM-5P9JM 207.2
GTEX-XLM4-3026-SM-4AT6L 205.7
GTEX-13FHO-3026-SM-5J1O9 203.8
GTEX-132Q8-3026-SM-5PNVG 203.6
GTEX-11EMC-3226-SM-5EGKW 201.3
GTEX-11EI6-3026-SM-5GZZO 196.6
GTEX-1128S-2726-SM-5H12C 192.9
GTEX-11GS4-3126-SM-5A5LH 187.9
GTEX-T2IS-3026-SM-32QPM 185.6
GTEX-RNOR-2326-SM-2TF4I 185.1
GTEX-12WSD-3126-SM-5HL7P 184.7
GTEX-131XW-3126-SM-5LZUC 184.7
GTEX-NPJ8-1526-SM-2D7VU 184.7
GTEX-14A5I-2926-SM-5Q5CQ 183.9
GTEX-QVUS-2826-SM-3GADB 183.6
GTEX-12WSH-3026-SM-5CVNI 182.4
GTEX-13QIC-2926-SM-5J2NF 181.6
GTEX-13X6K-2926-SM-5Q5D5 180.3
GTEX-139T8-1026-SM-5J2MC 178.6
GTEX-12ZZZ-3026-SM-5BC67 177.9
GTEX-13FHP-3026-SM-5IJBS 177.7
GTEX-13OVJ-2826-SM-5L3GW 177.5
GTEX-ZAJG-3126-SM-5HL9J 175.7
GTEX-13S7M-3126-SM-5RQJQ 172.6
GTEX-144FL-3026-SM-5O99C 172.0
GTEX-11TTK-2926-SM-5PNYP 171.7
GTEX-1117F-3226-SM-5N9CT 166.5
GTEX-ZZPT-3026-SM-5GZXH 165.8
GTEX-13JVG-3126-SM-5L3FH 165.2
GTEX-13PL6-3126-SM-5LUAR 164.7
GTEX-11GSP-3226-SM-5986O 163.4
GTEX-111FC-3126-SM-5GZZ2 159.2
GTEX-13PVQ-3026-SM-5SI93 158.4
GTEX-UTHO-3026-SM-3GAFB 153.5
GTEX-147GR-3026-SM-5S2ML 149.0
GTEX-11WQK-3026-SM-5EQL6 148.3
GTEX-NPJ7-2726-SM-2I3FT 147.4
GTEX-OXRN-2426-SM-2I5EQ 144.5
GTEX-T5JC-2426-SM-3NMDB 143.8
GTEX-PWO3-0926-SM-2I5EY 141.5
GTEX-N7MT-1126-SM-5SI7V 140.2
GTEX-13OW7-3026-SM-5L3GY 139.8
GTEX-PVOW-2526-SM-2XCF7 131.1
GTEX-12WSA-2926-SM-5EQ4D 129.2
GTEX-13G51-3026-SM-5IJB8 128.3
GTEX-13IVO-2926-SM-5L3CZ 122.1
GTEX-1445S-3026-SM-5O9BR 120.9
GTEX-11O72-2926-SM-5BC4V 117.1
GTEX-TSE9-3026-SM-3DB76 114.2
GTEX-QDT8-2926-SM-32PKC 110.0
GTEX-QMR6-1426-SM-32PLA 105.1
Show all
183.2231.5259.875.3370.0050100150200250300350
 
183.2231.5259.875.3370.0050100150200250300350

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 225.0
Samples: 108

Max RPKM: 395.8
Min RPKM: 75.3
Std RPKM: 60.8
Median RPKM: 231.5
GTEX-13NYS-0011-R10a-SM-5MR4S 395.8
GTEX-12ZZY-0011-R10b-SM-5HL7W 370.0
GTEX-13O3O-0011-R10a-SM-5LUA9 354.3
GTEX-13SLX-0011-R10a-SM-5P9HV 343.0
GTEX-12WSC-0011-R10a-SM-5GU57 341.1
GTEX-12WSD-0011-R10b-SM-5GU79 325.5
GTEX-14BIN-0011-R10a-SM-5S2UA 321.3
GTEX-13OW7-0011-R10a-SM-5L3H3 315.5
GTEX-13O3Q-0011-R10b-SM-5KM39 314.5
GTEX-147GR-0011-R10b-SM-5S2UM 311.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 310.2
GTEX-13X6J-0011-R10b-SM-5PNWA 308.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 298.6
GTEX-13NYB-0011-R10a-SM-5KM43 297.1
GTEX-1313W-0011-R10b-SM-5DUXA 294.0
GTEX-145MG-0011-R10a-SM-5PNWG 291.5
GTEX-12WSE-0011-R10b-SM-5P9JV 284.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 281.5
GTEX-13FXS-0011-R10a-SM-5J2MA 280.5
GTEX-12WSF-0011-R10a-SM-5LZVH 276.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 272.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 268.5
GTEX-Y8DK-0011-R10A-SM-4SOK1 265.5
GTEX-145MH-0011-R10b-SM-5PNUK 263.9
GTEX-13JUV-0011-R10b-SM-5LZXR 263.3
GTEX-N7MS-0011-R10A-SM-2HMJK 262.2
GTEX-X585-0011-R10A-SM-46MUY 261.1
GTEX-13N1W-0011-R10b-SM-5MR4H 259.3
GTEX-ZF28-0011-R10a-SM-4WWEH 258.7
GTEX-ZUA1-0011-R10a-SM-51MT6 256.8
GTEX-131YS-0011-R10b-SM-5EQ5N 255.5
GTEX-YJ89-0011-R10a-SM-4SOK9 252.1
GTEX-139TS-0011-R10a-SM-5K7TU 249.6
GTEX-NL3H-0011-R10A-SM-2I3E9 249.2
GTEX-13X6I-0011-R10a-SM-5PNWI 248.8
GTEX-N7MT-0011-R10A-SM-2I3E1 246.7
GTEX-13S7M-0011-R10b-SM-5PNZB 246.2
GTEX-13OW6-0011-R10a-SM-5L3HE 245.8
GTEX-13OVL-0011-R10a-SM-5L3GS 242.1
GTEX-131XH-0011-R10a-SM-5EGLJ 241.0
GTEX-13OW8-0011-R10a-SM-5L3H6 240.4
GTEX-T6MN-0011-R10A-SM-32QP7 238.5
GTEX-13CZV-0011-R10b-SM-5LZYD 238.3
GTEX-12WSM-0011-R10a-SM-5DUWV 236.5
GTEX-11H98-0011-R10b-SM-5NQ98 235.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 234.6
GTEX-13QIC-0011-R10a-SM-5O9C7 234.1
GTEX-13X6K-0011-R10a-SM-5P9JR 233.9
GTEX-Z93S-0011-R10a-SM-4RGNM 233.5
GTEX-145LS-0011-R10a-SM-5PNUQ 233.2
GTEX-WZTO-0011-R10B-SM-4E3KB 233.1
GTEX-XLM4-0011-R10A-SM-4AT5P 232.8
GTEX-13FLW-0011-R10b-SM-5LZZF 232.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 231.7
GTEX-WVLH-0011-R10A-SM-3MJFM 231.3
GTEX-NPJ8-0011-R10A-SM-2YUMO 227.6
GTEX-WL46-0011-R10A-SM-3MJFQ 225.8
GTEX-X4XX-0011-R10B-SM-46MWO 223.7
GTEX-147F4-0011-R10b-SM-5S2WC 222.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 220.4
GTEX-YFC4-0011-R10a-SM-4SOK5 219.6
GTEX-12WSH-0011-R10a-SM-5LZUS 217.4
GTEX-13G51-0011-R10b-SM-5LZYF 217.1
GTEX-ZVT3-0011-R10b-SM-57WB6 216.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 213.1
GTEX-13FHO-0011-R10b-SM-5J2MM 212.5
GTEX-13SLW-0011-R10a-SM-5S2UI 211.2
GTEX-X4EP-0011-R10B-SM-4QASJ 210.7
GTEX-14BIL-0011-R10a-SM-5SI75 209.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 209.3
GTEX-WWYW-0011-R10A-SM-3NB35 206.4
GTEX-13QJC-0011-R10a-SM-5SI63 206.3
GTEX-145LU-0011-R10a-SM-5PNWJ 200.7
GTEX-11WQC-0011-R10a-SM-57WCT 195.7
GTEX-12126-0011-R10b-SM-5BC6T 191.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 190.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 188.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 187.9
GTEX-NL4W-0011-R10A-SM-2I3DY 186.0
GTEX-RVPU-0011-R10A-SM-2XCAH 184.3
GTEX-S7SE-0011-R10A-SM-2XCDF 183.6
GTEX-ZXG5-0011-R10a-SM-57WDD 181.9
GTEX-12WSA-0011-R10b-SM-5P9ET 181.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 178.8
GTEX-13JVG-0011-R10b-SM-5KM2P 178.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 176.1
GTEX-11ZUS-0011-R10b-SM-5BC79 167.7
GTEX-13N2G-0011-R10a-SM-5MR34 165.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 162.9
GTEX-1477Z-0011-R10b-SM-5S2RF 161.5
GTEX-11WQK-0011-R10a-SM-5BC6R 159.8
GTEX-XMD1-0011-R10A-SM-4AT4A 157.2
GTEX-13NZA-0011-R10b-SM-5KM54 157.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 147.8
GTEX-TSE9-0011-R10A-SM-3DB7O 146.8
GTEX-ZV68-0011-R10a-SM-51MT7 143.4
GTEX-OXRN-0011-R10A-SM-2I5GC 141.7
GTEX-P44H-0011-R10A-SM-2XCEK 140.0
GTEX-1445S-0011-R10a-SM-5PNWB 139.7
GTEX-T5JC-0011-R10A-SM-32PM2 139.0
GTEX-131XW-0011-R10a-SM-5DUVA 137.7
GTEX-QVUS-0011-R10A-SM-3GIK3 136.2
GTEX-X261-0011-R10B-SM-4E3JT 133.7
GTEX-QMR6-0011-R10A-SM-32PKO 128.6
GTEX-14753-0011-R10b-SM-5S2WE 121.5
GTEX-OXRO-0011-R10A-SM-2I5EH 116.0
GTEX-13IVO-0011-R10a-SM-5LZY3 98.9
GTEX-QDT8-0011-R10A-SM-32PKG 75.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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