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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:243.1TPM
GTEx:146.7RPKM
FANTOM5:165.1Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA037915

 

Antibody HPA037916

 

Antibody CAB008661

 

Glandular cells

Medium   Medium   Medium  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

243.1

overview Male, age 65
Sample 1
TPM: 261.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 234.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 233.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 243.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

146.7

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 146.7
Samples: 88

Max RPKM: 268
Min RPKM: 72.1
Std RPKM: 41.3
Median RPKM: 143.7
GTEX-Y5LM-1626-SM-4VDTB 268.0
GTEX-ZA64-1226-SM-5HL7B 244.6
GTEX-YB5E-1526-SM-5IFIE 229.9
GTEX-ZYFG-2026-SM-5E43Y 222.5
GTEX-XGQ4-1326-SM-4GIDU 222.3
GTEX-ZLV1-1126-SM-4WWBW 219.8
GTEX-139YR-2226-SM-5IFFW 212.5
GTEX-ZYWO-1526-SM-5SIAL 207.8
GTEX-13FTW-2026-SM-5IJE2 202.5
GTEX-145LT-1026-SM-5LU9O 199.2
GTEX-XUZC-1426-SM-4BRV3 197.7
GTEX-13113-1226-SM-5EGHT 192.8
GTEX-WFG8-1626-SM-4LVMB 189.4
GTEX-133LE-1426-SM-5IFH1 189.3
GTEX-139T6-1026-SM-5IJGC 186.8
GTEX-11EQ9-1326-SM-5985X 184.9
GTEX-YF7O-1826-SM-5IFIU 182.6
GTEX-13D11-0726-SM-5LZZB 182.2
GTEX-ZP4G-1626-SM-57WGD 182.2
GTEX-13RTK-0826-SM-5Q5C6 182.0
GTEX-ZVZP-1826-SM-5GZXB 176.4
GTEX-ZXES-1526-SM-5NQ95 172.0
GTEX-ZTX8-0526-SM-59HLD 171.0
GTEX-VJYA-0926-SM-4KL1N 170.2
GTEX-YEC4-1726-SM-4W21E 168.1
GTEX-131XF-1326-SM-5GCMQ 168.0
GTEX-14DAR-1426-SM-5RQIR 166.1
GTEX-ZTSS-0926-SM-59865 163.6
GTEX-ZZ64-0526-SM-5GZXM 163.0
GTEX-1399R-2026-SM-5K7WN 159.7
GTEX-1122O-1326-SM-5H11F 159.4
GTEX-11DXX-1626-SM-5H11H 156.7
GTEX-ZVT2-2126-SM-5NQ93 155.9
GTEX-ZTPG-2626-SM-57WFX 155.5
GTEX-ZEX8-1826-SM-57WBH 154.7
GTEX-X15G-1426-SM-4PQZK 154.4
GTEX-ZPCL-1726-SM-57WEO 153.6
GTEX-Y9LG-1626-SM-5IFHM 153.3
GTEX-11DXZ-1326-SM-5H11X 153.0
GTEX-Y3IK-1726-SM-4YCCR 152.9
GTEX-XAJ8-0526-SM-47JYK 152.0
GTEX-111YS-1426-SM-5GID8 151.6
GTEX-13CF3-1226-SM-5LZXN 149.5
GTEX-WQUQ-2426-SM-4MVNW 144.7
GTEX-11I78-1126-SM-5A5K5 142.6
GTEX-X5EB-1626-SM-4E3IV 142.1
GTEX-XXEK-1026-SM-4BRUW 141.7
GTEX-WRHK-1026-SM-4MVOD 140.1
GTEX-13PL7-2626-SM-5IFH4 138.5
GTEX-11XUK-1426-SM-5EQMG 138.2
GTEX-14E6E-1626-SM-5RQI7 136.9
GTEX-WFG7-1726-SM-4LVME 135.7
GTEX-1192X-2526-SM-59868 133.6
GTEX-XBED-1426-SM-4AT4G 133.0
GTEX-1399S-2026-SM-5KM4B 132.7
GTEX-11NSD-1726-SM-5N9C3 132.5
GTEX-1399U-2126-SM-5IFEZ 127.2
GTEX-13QBU-1926-SM-5IJEW 126.1
GTEX-131XG-1726-SM-5LZUR 125.9
GTEX-13O21-1026-SM-5IJDU 125.1
GTEX-11P7K-1626-SM-5GU63 124.4
GTEX-Z9EW-0926-SM-5CVMM 121.9
GTEX-11P82-0826-SM-5P9GU 121.7
GTEX-12BJ1-1926-SM-5HL9Z 117.5
GTEX-WH7G-1626-SM-4LVMY 117.0
GTEX-ZLFU-1526-SM-4WWBT 116.2
GTEX-11VI4-1626-SM-5EQKO 116.1
GTEX-WFJO-0926-SM-4LVM2 114.3
GTEX-ZQG8-2526-SM-57WEQ 113.9
GTEX-ZVP2-1726-SM-5GU5P 113.7
GTEX-ZPIC-2326-SM-57WDW 110.9
GTEX-13111-1426-SM-5DUW3 105.6
GTEX-VUSG-1726-SM-4KKZL 104.1
GTEX-117YX-0326-SM-5GICL 101.5
GTEX-Y114-1426-SM-4TT6W 101.4
GTEX-XMK1-1826-SM-4B66F 100.0
GTEX-148VJ-2226-SM-5NQ9M 97.1
GTEX-13FH7-1226-SM-5IJFK 95.1
GTEX-12WSK-1526-SM-5CVNO 93.0
GTEX-13O61-1326-SM-5KM31 92.6
GTEX-13OVI-1926-SM-5IJCG 89.4
GTEX-UPK5-2026-SM-4JBIM 87.6
GTEX-ZF2S-1726-SM-57WFT 87.3
GTEX-ZC5H-2326-SM-4WAYT 86.2
GTEX-145ME-0926-SM-5O9AR 83.1
GTEX-WEY5-1526-SM-4LMJF 80.1
GTEX-111CU-1326-SM-5NQ8L 73.0
GTEX-ZQUD-0926-SM-57WE3 72.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

165.1

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 165.1
FF:10024-101D6 15,40,85 years, mixed 165.1

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