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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:137.8TPM
GTEx:29.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:High
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA008206

 

Antibody HPA012693

 

Endothelial cells

Low   Low  

Glial cells

Medium   High  

Neuronal cells

High   High  

Neuropil

High   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

137.8

N/A Male, age 5
Sample 1
TPM: 148.5
overview Female, age 40
Sample 2
TPM: 134.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 130.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

29.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 27.2
Samples: 114

Max RPKM: 50.9
Min RPKM: 7.9
Std RPKM: 7.6
Median RPKM: 26.5
GTEX-UTHO-3026-SM-3GAFB 50.9
GTEX-13G51-3026-SM-5IJB8 49.3
GTEX-QMR6-1426-SM-32PLA 42.8
GTEX-TSE9-3026-SM-3DB76 42.6
GTEX-1192X-3126-SM-5N9BY 41.3
GTEX-13NYC-2826-SM-5K7WR 39.0
GTEX-11DXY-3226-SM-5GIDE 38.9
GTEX-12ZZY-3026-SM-5GCOU 38.9
GTEX-QVUS-2826-SM-3GADB 38.6
GTEX-13NYB-3026-SM-5IJD7 38.2
GTEX-11ONC-2926-SM-5P9JM 38.0
GTEX-145LS-3126-SM-5Q5BY 37.4
GTEX-13FLW-1426-SM-5K7YE 36.7
GTEX-13OW8-2826-SM-5L3GC 36.1
GTEX-QDT8-2926-SM-32PKC 36.0
GTEX-PVOW-2526-SM-2XCF7 35.9
GTEX-111FC-3126-SM-5GZZ2 35.3
GTEX-13FHO-3026-SM-5J1O9 34.9
GTEX-1313W-3126-SM-5LZUI 34.8
GTEX-13FHP-3026-SM-5IJBS 34.7
GTEX-WVLH-3026-SM-3MJG9 34.6
GTEX-XOTO-3026-SM-4B65M 34.1
GTEX-11GS4-3126-SM-5A5LH 33.9
GTEX-XLM4-3026-SM-4AT6L 33.9
GTEX-14ASI-3026-SM-5S2PN 33.2
GTEX-T5JC-2426-SM-3NMDB 33.2
GTEX-T6MN-2626-SM-32PMQ 32.1
GTEX-13OW6-3026-SM-5J2MI 31.6
GTEX-ZAK1-3026-SM-5S2MJ 31.6
GTEX-QVJO-1426-SM-2S1QY 31.5
GTEX-N7MT-1126-SM-5SI7V 31.2
GTEX-WWYW-3126-SM-3NB39 30.9
GTEX-12ZZZ-3026-SM-5BC67 30.7
GTEX-1399T-3026-SM-5KLZC 30.7
GTEX-YFC4-3126-SM-5PNV6 30.3
GTEX-11NUK-2926-SM-5A5MD 30.2
GTEX-14BMV-3026-SM-5S2PQ 29.8
GTEX-11DXW-1126-SM-5H12Q 29.3
GTEX-ZZPT-3026-SM-5GZXH 29.3
GTEX-13OVH-3026-SM-5MR4N 29.0
GTEX-145MG-3026-SM-5RQJA 28.9
GTEX-RU72-3026-SM-5SI7Y 28.8
GTEX-1128S-2726-SM-5H12C 28.5
GTEX-131YS-3126-SM-5KLYT 28.5
GTEX-X4XX-3026-SM-3NMB2 28.5
GTEX-T2IS-3026-SM-32QPM 28.2
GTEX-13NYS-3126-SM-5KLYV 28.0
GTEX-WL46-2926-SM-3LK82 28.0
GTEX-ZYFD-3026-SM-5E44C 27.9
GTEX-WHSE-3026-SM-3P5ZH 27.1
GTEX-117XS-3026-SM-5N9CA 27.0
GTEX-11PRG-2926-SM-5987A 27.0
GTEX-13OW7-3026-SM-5L3GY 27.0
GTEX-11GSO-2926-SM-5HL73 26.9
GTEX-13O3O-3126-SM-5KM3H 26.7
GTEX-13SLX-3126-SM-5S2Q5 26.7
GTEX-WZTO-2926-SM-3NM9I 26.7
GTEX-11EI6-3026-SM-5GZZO 26.3
GTEX-12WSH-3026-SM-5CVNI 26.3
GTEX-13VXU-2926-SM-5LU5C 26.1
GTEX-14A5I-2926-SM-5Q5CQ 26.1
GTEX-ZUA1-3026-SM-59HJC 26.1
GTEX-13PL6-3126-SM-5LUAR 25.7
GTEX-ZVT3-3026-SM-5E43N 25.6
GTEX-12ZZX-2926-SM-5GCOQ 25.5
GTEX-13QIC-2926-SM-5J2NF 25.5
GTEX-145MH-3026-SM-5Q5DZ 25.4
GTEX-RNOR-2326-SM-2TF4I 25.2
GTEX-12ZZW-2926-SM-5LZUP 25.0
GTEX-X585-3026-SM-46MWF 24.9
GTEX-132Q8-3026-SM-5PNVG 24.8
GTEX-144GL-3026-SM-5Q5CW 24.8
GTEX-13FXS-3126-SM-5J2NN 24.5
GTEX-11O72-2926-SM-5BC4V 24.4
GTEX-12WSD-3126-SM-5HL7P 24.3
GTEX-145MF-2726-SM-5O995 24.2
GTEX-12WSC-3026-SM-5GCNF 23.9
GTEX-13O3Q-2926-SM-5KM45 23.7
GTEX-NPJ8-1526-SM-2D7VU 23.7
GTEX-R55F-1326-SM-5S2V4 23.3
GTEX-11ZUS-2926-SM-5FQSL 23.0
GTEX-13X6J-3026-SM-5Q5CU 23.0
GTEX-Z93S-2926-SM-57WB9 22.8
GTEX-13S7M-3126-SM-5RQJQ 22.7
GTEX-Y8DK-0826-SM-4TT3T 22.7
GTEX-12WSA-2926-SM-5EQ4D 22.5
GTEX-OXRN-2426-SM-2I5EQ 22.5
GTEX-131XW-3126-SM-5LZUC 22.3
GTEX-ZAJG-3126-SM-5HL9J 22.3
GTEX-11GSP-3226-SM-5986O 22.1
GTEX-12126-1026-SM-5P9JJ 22.1
GTEX-139T8-1026-SM-5J2MC 21.9
GTEX-ZE7O-3126-SM-5HL5X 21.9
GTEX-1445S-3026-SM-5O9BR 21.2
GTEX-YJ89-3026-SM-5IFJI 21.2
GTEX-PWO3-0926-SM-2I5EY 20.8
GTEX-13IVO-2926-SM-5L3CZ 20.2
GTEX-Q2AG-2926-SM-2HMJ3 19.8
GTEX-1117F-3226-SM-5N9CT 19.6
GTEX-13PVQ-3026-SM-5SI93 19.4
GTEX-NPJ7-2726-SM-2I3FT 19.1
GTEX-13JVG-3126-SM-5L3FH 18.5
GTEX-Y111-2726-SM-4TT3N 18.5
GTEX-11EMC-3226-SM-5EGKW 17.8
GTEX-11OC5-0726-SM-5P9JK 17.0
GTEX-11TTK-2926-SM-5PNYP 16.9
GTEX-13X6K-2926-SM-5Q5D5 15.7
GTEX-144FL-3026-SM-5O99C 13.9
GTEX-13JUV-2926-SM-5LZX7 13.8
GTEX-13OVJ-2826-SM-5L3GW 13.3
GTEX-147GR-3026-SM-5S2ML 12.7
GTEX-11NV4-2126-SM-5N9DS 11.7
GTEX-11WQK-3026-SM-5EQL6 9.3
GTEX-11OF3-2926-SM-5HL78 7.9
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 31.1
Samples: 108

Max RPKM: 70
Min RPKM: 6.7
Std RPKM: 10.4
Median RPKM: 31.1
GTEX-QDT8-0011-R10A-SM-32PKG 70.0
GTEX-12WSD-0011-R10b-SM-5GU79 58.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 50.9
GTEX-QVUS-0011-R10A-SM-3GIK3 50.0
GTEX-WVLH-0011-R10A-SM-3MJFM 49.7
GTEX-13CZV-0011-R10b-SM-5LZYD 49.2
GTEX-WWYW-0011-R10A-SM-3NB35 49.0
GTEX-X585-0011-R10A-SM-46MUY 47.6
GTEX-S7SE-0011-R10A-SM-2XCDF 46.8
GTEX-13FLW-0011-R10b-SM-5LZZF 46.0
GTEX-XLM4-0011-R10A-SM-4AT5P 44.6
GTEX-13X6I-0011-R10a-SM-5PNWI 42.1
GTEX-13X6K-0011-R10a-SM-5P9JR 42.0
GTEX-13S7M-0011-R10b-SM-5PNZB 41.3
GTEX-145MG-0011-R10a-SM-5PNWG 41.2
GTEX-ZVZQ-0011-R10b-SM-51MRT 40.7
GTEX-T6MN-0011-R10A-SM-32QP7 40.6
GTEX-X4XX-0011-R10B-SM-46MWO 40.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 39.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 38.8
GTEX-14BIL-0011-R10a-SM-5SI75 38.7
GTEX-QMR6-0011-R10A-SM-32PKO 38.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 37.3
GTEX-145LU-0011-R10a-SM-5PNWJ 37.3
GTEX-XMD1-0011-R10A-SM-4AT4A 37.1
GTEX-RVPU-0011-R10A-SM-2XCAH 36.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 36.4
GTEX-145LS-0011-R10a-SM-5PNUQ 36.4
GTEX-13O3Q-0011-R10b-SM-5KM39 36.0
GTEX-13OVL-0011-R10a-SM-5L3GS 35.4
GTEX-12WSA-0011-R10b-SM-5P9ET 35.3
GTEX-131YS-0011-R10b-SM-5EQ5N 34.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 34.7
GTEX-12WSE-0011-R10b-SM-5P9JV 34.5
GTEX-145MH-0011-R10b-SM-5PNUK 34.4
GTEX-N7MT-0011-R10A-SM-2I3E1 34.4
GTEX-11H98-0011-R10b-SM-5NQ98 34.3
GTEX-YFC4-0011-R10a-SM-4SOK5 34.3
GTEX-14BIN-0011-R10a-SM-5S2UA 33.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 33.9
GTEX-T5JC-0011-R10A-SM-32PM2 33.9
GTEX-13QIC-0011-R10a-SM-5O9C7 33.5
GTEX-WZTO-0011-R10B-SM-4E3KB 33.4
GTEX-P44H-0011-R10A-SM-2XCEK 33.2
GTEX-12WSF-0011-R10a-SM-5LZVH 33.1
GTEX-NL3H-0011-R10A-SM-2I3E9 33.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 33.1
GTEX-ZF28-0011-R10a-SM-4WWEH 33.1
GTEX-13FHO-0011-R10b-SM-5J2MM 32.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 32.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 32.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 31.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 31.9
GTEX-12WSM-0011-R10a-SM-5DUWV 31.4
GTEX-12WSH-0011-R10a-SM-5LZUS 30.9
GTEX-12WSC-0011-R10a-SM-5GU57 30.8
GTEX-OXRN-0011-R10A-SM-2I5GC 30.7
GTEX-131XH-0011-R10a-SM-5EGLJ 30.4
GTEX-13X6J-0011-R10b-SM-5PNWA 30.2
GTEX-WL46-0011-R10A-SM-3MJFQ 30.2
GTEX-13SLW-0011-R10a-SM-5S2UI 29.2
GTEX-139TS-0011-R10a-SM-5K7TU 29.0
GTEX-ZUA1-0011-R10a-SM-51MT6 29.0
GTEX-13NYS-0011-R10a-SM-5MR4S 28.3
GTEX-1445S-0011-R10a-SM-5PNWB 28.2
GTEX-TSE9-0011-R10A-SM-3DB7O 28.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 28.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 27.8
GTEX-1313W-0011-R10b-SM-5DUXA 27.8
GTEX-13JUV-0011-R10b-SM-5LZXR 27.8
GTEX-147GR-0011-R10b-SM-5S2UM 27.8
GTEX-13O3O-0011-R10a-SM-5LUA9 27.4
GTEX-13FXS-0011-R10a-SM-5J2MA 27.2
GTEX-11WQC-0011-R10a-SM-57WCT 26.9
GTEX-12126-0011-R10b-SM-5BC6T 26.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 26.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 26.2
GTEX-13OW6-0011-R10a-SM-5L3HE 26.1
GTEX-YJ89-0011-R10a-SM-4SOK9 26.0
GTEX-13OW7-0011-R10a-SM-5L3H3 25.6
GTEX-13SLX-0011-R10a-SM-5P9HV 25.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 25.2
GTEX-13NYB-0011-R10a-SM-5KM43 25.2
GTEX-147F4-0011-R10b-SM-5S2WC 25.1
GTEX-13OW8-0011-R10a-SM-5L3H6 24.7
GTEX-13G51-0011-R10b-SM-5LZYF 24.6
GTEX-ZVT3-0011-R10b-SM-57WB6 24.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 24.0
GTEX-Z93S-0011-R10a-SM-4RGNM 23.6
GTEX-13N1W-0011-R10b-SM-5MR4H 22.2
GTEX-N7MS-0011-R10A-SM-2HMJK 21.3
GTEX-14753-0011-R10b-SM-5S2WE 20.1
GTEX-ZXG5-0011-R10a-SM-57WDD 20.0
GTEX-X4EP-0011-R10B-SM-4QASJ 19.0
GTEX-OXRO-0011-R10A-SM-2I5EH 18.3
GTEX-13QJC-0011-R10a-SM-5SI63 18.1
GTEX-ZV68-0011-R10a-SM-51MT7 17.4
GTEX-1477Z-0011-R10b-SM-5S2RF 17.0
GTEX-X261-0011-R10B-SM-4E3JT 16.6
GTEX-11ZUS-0011-R10b-SM-5BC79 16.1
GTEX-NL4W-0011-R10A-SM-2I3DY 15.5
GTEX-131XW-0011-R10a-SM-5DUVA 13.7
GTEX-13NZA-0011-R10b-SM-5KM54 13.6
GTEX-13IVO-0011-R10a-SM-5LZY3 12.8
GTEX-13JVG-0011-R10b-SM-5KM2P 12.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 9.2
GTEX-11WQK-0011-R10a-SM-5BC6R 8.8
GTEX-13N2G-0011-R10a-SM-5MR34 6.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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