We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RNF6
  • TISSUE

  • premium

    CELL

  • CANCER

ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA039343

 

Antibody HPA040048

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA039343   HPA040048  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

   

Released in version

12   7  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA039343

 

Antibody HPA040048

 
Immunocytochemistry

Supported   Supported  
Immunohistochemistry

Approved   Approved  
Western blot

Supported   Uncertain  
Protein array

Approved   Supported  

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA039343

 

Antibody HPA040048

 

Standard validation

Supported   Supported  

   

Figure description

Immunofluorescent staining of human cell line U-2 OS shows localization to nuclear membrane.   Immunofluorescent staining of human cell line A-431 shows localization to nuclear membrane & vesicles.  

Antibody dilution

1:43   1:111  

Literature conformity

The subcellular location is supported by literature.   The subcellular location is supported by literature.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA039343

 

Antibody HPA040048

 

Standard validation

Approved   Approved  

   

Figure description

Immunohistochemical staining of human testis shows moderate nuclear positivity in seminiferus ducts and leydig cells.   Immunohistochemical staining of human bone marrow shows strong nuclear positivity in bone marrow poietic cells.  

Expression

RNA: detected in 37 tissues
Protein: detected in 74 cell types
  RNA: detected in 37 tissues
Protein: detected in 26 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:45   1:75  

Literature conformity

Partly consistent with gene/protein characterization data.   Partly consistent with gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.   Mainly not consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA039343

 

Antibody HPA040048

 

Standard validation

Supported

Single band corresponding to the predicted size in kDa (+/-20%).
  Uncertain

No bands detected.
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: Negative control (vector only transfected HEK293T lysate)
Lane 3: Over-expression Lysate (Co-expressed with a C-terminal myc-DDK tag (~3.1 kDa) in mammalian HEK293T cells, LY416958)
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: Negative control (vector only transfected HEK293T lysate)
Lane 3: Over-expression Lysate (Co-expressed with a C-terminal myc-DDK tag (~3.1 kDa) in mammalian HEK293T cells, LY416958)
 

Target mass (kDa)

78.1   78.1  

Antibody dilution

1:125   1:250  

PROTEIN ARRAY

 
 

Antibody HPA039343

 

Antibody HPA040048

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:3000   1:6000  

ANTIGEN INFORMATION

 
 

Antibody HPA039343

 

Antibody HPA040048

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

75   76  

Antigen sequence

SGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERRGTAYTPFS
NSRLVSRITVEEGEESSRSSTAVRR
 
TLGRLRNGIGGAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHV
WENGARSNVTVRNTNQRLEPIRLRST
 

Matching transcripts

RNF6-001 - ENSP00000342121 [100%]
RNF6-002 - ENSP00000370982 [100%]
RNF6-006 - ENSP00000371000 [100%]
  RNF6-001 - ENSP00000342121 [100%]
RNF6-002 - ENSP00000370982 [100%]
RNF6-006 - ENSP00000371000 [100%]
 

Other gene match

   
ANTIGEN VIEW
RNF6-001
RNF6-002
RNF6-006
 

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.