Tissue expression of PODXL - Staining in caudate - The Human Protein Atlas

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PODXL

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TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation

Dictionary
	Caudate

CAUDATE - Expression summary

Protein expression

h

m

l

n

RNA expression

GTEx:	14.4	RPKM
FANTOM5:	99.9	Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:	Not detected
Neuronal cells:	Not detected

Antibody staining	Antibody HPA002110		Antibody HPA045507		Antibody CAB016169		Antibody CAB062558		Antibody CAB068219		Antibody CAB068220
Glial cells	Not detected		Not detected		Not detected		Not detected		Not detected		Not detected
Neuronal cells	Low		Not detected		Not detected		Not detected		Not detected		Not detected

CAUDATE - HPA RNA-seq
Pending HPA RNA-seq analysis

CAUDATE - GTEx RNA-seq

Average RPKM	14.4

GTEx sample id

RPKM

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 14.4

Samples: 117

Max RPKM: 55.3
Min RPKM: 2.9
Std RPKM: 7.1
Median RPKM: 12.9

GTEX-13OVJ-0011-R5a-SM-5P9H7

55.3

GTEX-NL4W-0011-R5a-SM-2I3GD

31.5

GTEX-NPJ8-0011-R5a-SM-2HMJY

31.1

GTEX-X585-0011-R5A-SM-46MVI

30.7

GTEX-13PVQ-0011-R5b-SM-5O9DI

27.6

GTEX-QMR6-0011-R5A-SM-32PKT

26.8

GTEX-13X6I-0011-R5a-SM-5PNWW

25.9

GTEX-OHPN-0011-R5A-SM-2I5FF

25.9

Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million	99.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 99.9

FF:10164-103B2	76 years, female	127.3
FF:10379-105H1	89 years, female	72.5

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.