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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:8.2TPM
GTEx:14.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA002110

 

Antibody HPA045507

 

Antibody CAB016169

 

Antibody CAB062558

 

Antibody CAB068219

 

Antibody CAB068220

 

Endothelial cells

High   Not detected   High   Medium   High   High  

Glial cells

Not detected   Not detected   Not detected   Not detected   Not detected   Not detected  

Neuronal cells

Low   Medium   Not detected   Not detected   Not detected   Not detected  

Neuropil

Medium   Not detected   Not detected   Not detected   Not detected   Not detected  
           
           
           

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

8.2

N/A Male, age 5
Sample 1
TPM: 9.1
overview Female, age 40
Sample 2
TPM: 7.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 7.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

14.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 17.1
Samples: 114

Max RPKM: 90.1
Min RPKM: 3.1
Std RPKM: 10.2
Median RPKM: 14.3
GTEX-11OC5-0726-SM-5P9JK 90.1
GTEX-X585-3026-SM-46MWF 60.3
GTEX-13IVO-2926-SM-5L3CZ 43.6
GTEX-13JVG-3126-SM-5L3FH 38.3
GTEX-13OVJ-2826-SM-5L3GW 36.5
GTEX-13NYC-2826-SM-5K7WR 33.3
GTEX-11O72-2926-SM-5BC4V 30.4
GTEX-11TTK-2926-SM-5PNYP 26.5
GTEX-13X6K-2926-SM-5Q5D5 26.0
GTEX-11EMC-3226-SM-5EGKW 24.6
GTEX-11WQK-3026-SM-5EQL6 24.4
GTEX-ZAJG-3126-SM-5HL9J 23.8
GTEX-12WSD-3126-SM-5HL7P 23.3
GTEX-13JUV-2926-SM-5LZX7 23.0
GTEX-12WSA-2926-SM-5EQ4D 22.9
GTEX-139T8-1026-SM-5J2MC 22.3
GTEX-13PVQ-3026-SM-5SI93 22.1
GTEX-ZVT3-3026-SM-5E43N 22.1
GTEX-NPJ7-2726-SM-2I3FT 21.8
GTEX-12ZZZ-3026-SM-5BC67 21.2
GTEX-13QIC-2926-SM-5J2NF 21.1
GTEX-NPJ8-1526-SM-2D7VU 21.1
GTEX-11GSP-3226-SM-5986O 20.9
GTEX-145LS-3126-SM-5Q5BY 20.7
GTEX-1445S-3026-SM-5O9BR 20.5
GTEX-11ONC-2926-SM-5P9JM 20.1
GTEX-1399T-3026-SM-5KLZC 19.7
GTEX-PWO3-0926-SM-2I5EY 19.6
GTEX-WWYW-3126-SM-3NB39 19.6
GTEX-QMR6-1426-SM-32PLA 19.4
GTEX-R55F-1326-SM-5S2V4 19.2
GTEX-QVJO-1426-SM-2S1QY 19.0
GTEX-11GSO-2926-SM-5HL73 18.9
GTEX-QDT8-2926-SM-32PKC 18.7
GTEX-T5JC-2426-SM-3NMDB 18.1
GTEX-WHSE-3026-SM-3P5ZH 18.1
GTEX-13S7M-3126-SM-5RQJQ 17.8
GTEX-1192X-3126-SM-5N9BY 17.7
GTEX-X4XX-3026-SM-3NMB2 17.7
GTEX-1128S-2726-SM-5H12C 17.3
GTEX-13PL6-3126-SM-5LUAR 16.9
GTEX-ZAK1-3026-SM-5S2MJ 16.8
GTEX-12WSH-3026-SM-5CVNI 16.4
GTEX-11EI6-3026-SM-5GZZO 16.3
GTEX-131YS-3126-SM-5KLYT 16.3
GTEX-OXRN-2426-SM-2I5EQ 16.2
GTEX-QVUS-2826-SM-3GADB 16.2
GTEX-XLM4-3026-SM-4AT6L 16.1
GTEX-13NYS-3126-SM-5KLYV 15.9
GTEX-N7MT-1126-SM-5SI7V 15.9
GTEX-145MH-3026-SM-5Q5DZ 15.6
GTEX-RU72-3026-SM-5SI7Y 15.5
GTEX-PVOW-2526-SM-2XCF7 15.0
GTEX-14A5I-2926-SM-5Q5CQ 14.5
GTEX-WZTO-2926-SM-3NM9I 14.5
GTEX-ZZPT-3026-SM-5GZXH 14.5
GTEX-Q2AG-2926-SM-2HMJ3 14.3
GTEX-WL46-2926-SM-3LK82 14.3
GTEX-12126-1026-SM-5P9JJ 14.2
GTEX-13FHO-3026-SM-5J1O9 14.2
GTEX-13OW7-3026-SM-5L3GY 14.2
GTEX-117XS-3026-SM-5N9CA 14.1
GTEX-13O3Q-2926-SM-5KM45 14.1
GTEX-13NYB-3026-SM-5IJD7 14.0
GTEX-13SLX-3126-SM-5S2Q5 14.0
GTEX-Y111-2726-SM-4TT3N 14.0
GTEX-132Q8-3026-SM-5PNVG 13.9
GTEX-144FL-3026-SM-5O99C 13.8
GTEX-RNOR-2326-SM-2TF4I 13.8
GTEX-Y8DK-0826-SM-4TT3T 13.8
GTEX-14BMV-3026-SM-5S2PQ 13.7
GTEX-11DXY-3226-SM-5GIDE 13.6
GTEX-12ZZW-2926-SM-5LZUP 13.6
GTEX-12ZZX-2926-SM-5GCOQ 13.6
GTEX-131XW-3126-SM-5LZUC 13.3
GTEX-12WSC-3026-SM-5GCNF 13.2
GTEX-13OW8-2826-SM-5L3GC 13.1
GTEX-13VXU-2926-SM-5LU5C 13.1
GTEX-13O3O-3126-SM-5KM3H 12.9
GTEX-144GL-3026-SM-5Q5CW 12.9
GTEX-11NUK-2926-SM-5A5MD 12.6
GTEX-Z93S-2926-SM-57WB9 12.6
GTEX-11PRG-2926-SM-5987A 12.5
GTEX-T6MN-2626-SM-32PMQ 12.4
GTEX-ZUA1-3026-SM-59HJC 12.3
GTEX-T2IS-3026-SM-32QPM 11.8
GTEX-11ZUS-2926-SM-5FQSL 11.7
GTEX-1117F-3226-SM-5N9CT 11.4
GTEX-13X6J-3026-SM-5Q5CU 11.4
GTEX-12ZZY-3026-SM-5GCOU 11.3
GTEX-145MF-2726-SM-5O995 11.3
GTEX-14ASI-3026-SM-5S2PN 11.1
GTEX-UTHO-3026-SM-3GAFB 11.0
GTEX-XOTO-3026-SM-4B65M 10.9
GTEX-11GS4-3126-SM-5A5LH 10.8
GTEX-YFC4-3126-SM-5PNV6 10.8
GTEX-13OW6-3026-SM-5J2MI 10.6
GTEX-WVLH-3026-SM-3MJG9 10.4
GTEX-TSE9-3026-SM-3DB76 10.2
GTEX-ZE7O-3126-SM-5HL5X 10.1
GTEX-11NV4-2126-SM-5N9DS 9.9
GTEX-111FC-3126-SM-5GZZ2 9.8
GTEX-13FXS-3126-SM-5J2NN 9.6
GTEX-145MG-3026-SM-5RQJA 9.6
GTEX-13FHP-3026-SM-5IJBS 9.4
GTEX-ZYFD-3026-SM-5E44C 9.2
GTEX-13OVH-3026-SM-5MR4N 9.1
GTEX-11DXW-1126-SM-5H12Q 8.9
GTEX-13FLW-1426-SM-5K7YE 8.5
GTEX-1313W-3126-SM-5LZUI 8.0
GTEX-YJ89-3026-SM-5IFJI 8.0
GTEX-147GR-3026-SM-5S2ML 7.6
GTEX-13G51-3026-SM-5IJB8 6.3
GTEX-11OF3-2926-SM-5HL78 3.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 12.6
Samples: 108

Max RPKM: 39.1
Min RPKM: 2.8
Std RPKM: 6.2
Median RPKM: 11.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 39.1
GTEX-11ZUS-0011-R10b-SM-5BC79 38.2
GTEX-X585-0011-R10A-SM-46MUY 31.8
GTEX-T5JC-0011-R10A-SM-32PM2 25.2
GTEX-QVJO-0011-R10A-SM-2S1QJ 23.0
GTEX-13X6I-0011-R10a-SM-5PNWI 22.9
GTEX-14BIL-0011-R10a-SM-5SI75 21.8
GTEX-NL4W-0011-R10A-SM-2I3DY 21.7
GTEX-QMR6-0011-R10A-SM-32PKO 21.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 21.1
GTEX-13FHO-0011-R10b-SM-5J2MM 20.0
GTEX-131YS-0011-R10b-SM-5EQ5N 19.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 19.2
GTEX-145LS-0011-R10a-SM-5PNUQ 18.5
GTEX-X4EP-0011-R10B-SM-4QASJ 18.5
GTEX-12WSA-0011-R10b-SM-5P9ET 18.4
GTEX-XLM4-0011-R10A-SM-4AT5P 18.2
GTEX-QVUS-0011-R10A-SM-3GIK3 17.3
GTEX-11WQK-0011-R10a-SM-5BC6R 17.2
GTEX-P44H-0011-R10A-SM-2XCEK 16.8
GTEX-WL46-0011-R10A-SM-3MJFQ 16.7
GTEX-ZAB4-0011-R10a-SM-4SOKH 16.4
GTEX-13N2G-0011-R10a-SM-5MR34 16.0
GTEX-13NZA-0011-R10b-SM-5KM54 15.9
GTEX-13QJC-0011-R10a-SM-5SI63 15.9
GTEX-XMD1-0011-R10A-SM-4AT4A 15.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 15.8
GTEX-QDT8-0011-R10A-SM-32PKG 15.1
GTEX-13JVG-0011-R10b-SM-5KM2P 14.8
GTEX-N7MT-0011-R10A-SM-2I3E1 14.8
GTEX-OXRO-0011-R10A-SM-2I5EH 14.8
GTEX-13JUV-0011-R10b-SM-5LZXR 14.7
GTEX-NL3H-0011-R10A-SM-2I3E9 14.4
GTEX-13QIC-0011-R10a-SM-5O9C7 14.2
GTEX-13X6K-0011-R10a-SM-5P9JR 14.2
GTEX-13NYB-0011-R10a-SM-5KM43 14.0
GTEX-13IVO-0011-R10a-SM-5LZY3 13.9
GTEX-X261-0011-R10B-SM-4E3JT 13.8
GTEX-13G51-0011-R10b-SM-5LZYF 13.7
GTEX-13OW8-0011-R10a-SM-5L3H6 13.4
GTEX-1477Z-0011-R10b-SM-5S2RF 13.4
GTEX-X4XX-0011-R10B-SM-46MWO 13.2
GTEX-N7MS-0011-R10A-SM-2HMJK 13.1
GTEX-ZF28-0011-R10a-SM-4WWEH 12.9
GTEX-13SLW-0011-R10a-SM-5S2UI 12.7
GTEX-WWYW-0011-R10A-SM-3NB35 12.7
GTEX-ZV68-0011-R10a-SM-51MT7 12.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 12.2
GTEX-145MH-0011-R10b-SM-5PNUK 12.2
GTEX-OXRN-0011-R10A-SM-2I5GC 12.0
GTEX-ZUA1-0011-R10a-SM-51MT6 12.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 12.0
GTEX-12WSH-0011-R10a-SM-5LZUS 11.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 11.9
GTEX-13S7M-0011-R10b-SM-5PNZB 11.8
GTEX-11WQC-0011-R10a-SM-57WCT 11.4
GTEX-TSE9-0011-R10A-SM-3DB7O 11.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 11.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 11.0
GTEX-11H98-0011-R10b-SM-5NQ98 10.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 10.9
GTEX-13N1W-0011-R10b-SM-5MR4H 10.9
GTEX-WZTO-0011-R10B-SM-4E3KB 10.8
GTEX-13OW6-0011-R10a-SM-5L3HE 10.6
GTEX-13O3Q-0011-R10b-SM-5KM39 10.5
GTEX-ZVT3-0011-R10b-SM-57WB6 10.2
GTEX-S7SE-0011-R10A-SM-2XCDF 10.1
GTEX-13OVL-0011-R10a-SM-5L3GS 9.9
GTEX-T6MN-0011-R10A-SM-32QP7 9.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 9.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 9.6
GTEX-12WSF-0011-R10a-SM-5LZVH 9.5
GTEX-12WSM-0011-R10a-SM-5DUWV 9.3
GTEX-1445S-0011-R10a-SM-5PNWB 9.0
GTEX-Z93S-0011-R10a-SM-4RGNM 9.0
GTEX-13FLW-0011-R10b-SM-5LZZF 8.9
GTEX-WVLH-0011-R10A-SM-3MJFM 8.8
GTEX-13CZV-0011-R10b-SM-5LZYD 8.5
GTEX-13OW7-0011-R10a-SM-5L3H3 8.4
GTEX-YFC4-0011-R10a-SM-4SOK5 8.4
GTEX-12126-0011-R10b-SM-5BC6T 8.3
GTEX-1313W-0011-R10b-SM-5DUXA 8.1
GTEX-13SLX-0011-R10a-SM-5P9HV 8.1
GTEX-145LU-0011-R10a-SM-5PNWJ 8.1
GTEX-145MG-0011-R10a-SM-5PNWG 8.0
GTEX-13NYS-0011-R10a-SM-5MR4S 7.9
GTEX-12WSC-0011-R10a-SM-5GU57 7.5
GTEX-13O3O-0011-R10a-SM-5LUA9 7.4
GTEX-13X6J-0011-R10b-SM-5PNWA 7.4
GTEX-131XH-0011-R10a-SM-5EGLJ 7.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 7.3
GTEX-RVPU-0011-R10A-SM-2XCAH 7.2
GTEX-132Q8-0011-R10b-SM-5DUWZ 6.7
GTEX-YJ89-0011-R10a-SM-4SOK9 6.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 6.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 6.4
GTEX-147F4-0011-R10b-SM-5S2WC 6.3
GTEX-147GR-0011-R10b-SM-5S2UM 6.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 6.1
GTEX-13FXS-0011-R10a-SM-5J2MA 6.0
GTEX-12WSE-0011-R10b-SM-5P9JV 5.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 5.6
GTEX-14BIN-0011-R10a-SM-5S2UA 5.5
GTEX-131XW-0011-R10a-SM-5DUVA 5.3
GTEX-14753-0011-R10b-SM-5S2WE 4.9
GTEX-ZXG5-0011-R10a-SM-57WDD 4.5
GTEX-139TS-0011-R10a-SM-5K7TU 3.1
GTEX-12WSD-0011-R10b-SM-5GU79 2.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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