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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA ENDOMETRIUM 1

GENE/PROTEIN

Antibody validation


Dictionary

Endometrium

Tissue proteome

Endometrium

ENDOMETRIUM - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:15.2TPM
GTEx:25.8RPKM
FANTOM5:221.4Tags Per Million

ENDOMETRIUM 1 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Not detected
Glandular cells:Medium
 

Antibody staining

Antibody HPA002110

 

Antibody HPA045507

 

Antibody CAB016169

 

Antibody CAB062558

 

Antibody CAB068219

 

Antibody CAB068220

 

Cells in endometrial stroma

Not detected   Not detected   Not detected   Not detected   Not detected   Not detected  

Glandular cells

High   Not detected   Medium   Medium   Medium   Medium  
           
           
           

ENDOMETRIUM 2 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Not detected
Glandular cells:Medium
 

Antibody staining

Antibody HPA002110

 

Antibody HPA045507

 

Antibody CAB016169

 

Antibody CAB062558

 

Antibody CAB068219

 

Antibody CAB068220

 

Cells in endometrial stroma

Low   Not detected   Not detected   Not detected   Not detected   Not detected  

Glandular cells

High   Not detected   Not detected   Medium   Medium   High  
           
           
           

ENDOMETRIUM - HPA RNA-seq

Average TPM

15.2

overview Female, age 34
Sample 1
TPM: 13.2
Cell types%
Glandular cells: 5
Stromal cells: 25
Smooth muscle cells: 65
Other cell types: 5
overview Female, age 56
Sample 2
TPM: 14.0
Cell types%
Glandular cells: 5
Stromal cells: 15
Smooth muscle cells: 75
Other cell types: 5
overview Female, age 40
Sample 3
TPM: 17.0
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 70
Other cell types: 5
overview Female, age 60
Sample 4
TPM: 15.0
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 75
Other cell types: 0
overview Female, age 83
Sample 5
TPM: 16.6
Cell types%
Glandular cells: 5
Stromal cells: 10
Smooth muscle cells: 80
Other cell types: 5

ENDOMETRIUM - GTEx RNA-seq

Average RPKM

25.8

GTEx sample id

RPKM

 

Uterus - Endometrium

Uterus - Endometrium
RPKM: 25.8
Samples: 14

Max RPKM: 46.2
Min RPKM: 12.4
Std RPKM: 8.5
Median RPKM: 24.4
GTEX-PWN1-2026-SM-48TD9 46.2
GTEX-ZVT2-0426-SM-5E44S 37.4
GTEX-PX3G-2026-SM-48U1H 32.4
GTEX-R55G-1626-SM-48FF4 29.7
GTEX-11EM3-1926-SM-5987U 29.5
GTEX-P78B-2526-SM-3P5ZY 26.5
GTEX-U3ZN-0726-SM-4DXT5 25.2
GTEX-XUZC-0926-SM-4BOQF 23.6
GTEX-T5JW-1526-SM-4DM5E 22.3
GTEX-S32W-1426-SM-4AD66 21.6
GTEX-T6MO-1526-SM-4DM57 19.5
GTEX-13QBU-1626-SM-5LU4S 18.3
GTEX-ZTPG-2026-SM-5O999 16.8
GTEX-Y114-1826-SM-4TT87 12.4
Show all

ENDOMETRIUM - FANTOM5 CAGE

Average Tags Per Million

221.4

FANTOM5 sample id

Sample description

Tags Per Million

Uterus
Tags Per Million: 221.4
FF:10100-102D1 23-63 years, female 221.4

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