We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CALU
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:82.9TPM
GTEx:31.5RPKM
FANTOM5:129.4Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:High
Myoepithelial cells:High
 

Antibody staining

Antibody HPA006018

 

Adipocytes

Medium  

Glandular cells

High  

Myoepithelial cells

High  
 
 
 

BREAST - HPA RNA-seq

Average TPM

82.9

overview Female, age 52
Sample 1
TPM: 78.0
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 111.8
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 58.5
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 83.1
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

31.5

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 31.5
Samples: 214

Max RPKM: 86.3
Min RPKM: 12.5
Std RPKM: 10.7
Median RPKM: 29.6
GTEX-11TUW-1826-SM-5BC5D 86.3
GTEX-WFON-1826-SM-3GILG 64.0
GTEX-11WQK-2426-SM-5GU5C 63.9
GTEX-XYKS-1326-SM-4BRUN 62.5
GTEX-U8XE-0826-SM-4E3J1 61.2
GTEX-X4XY-0926-SM-4E3JD 61.2
GTEX-TKQ1-0226-SM-33HB5 60.1
GTEX-RUSQ-2026-SM-4GIAK 57.8
GTEX-14E6E-1326-SM-5S2NR 54.7
GTEX-T5JW-2026-SM-4DM63 52.5
GTEX-Y3I4-1526-SM-4TT7K 52.3
GTEX-11EQ9-1826-SM-5Q5AJ 52.1
GTEX-X261-0626-SM-3NMD9 52.0
GTEX-132AR-0826-SM-5EGK6 50.9
GTEX-13S86-1226-SM-5S2OA 49.8
GTEX-YJ8O-2226-SM-5IFHW 49.6
GTEX-13O3Q-2226-SM-5KM4O 48.4
GTEX-S33H-0326-SM-4AD6N 48.0
GTEX-WOFL-0826-SM-3MJG1 46.8
GTEX-12WSK-2226-SM-5GCO5 46.3
GTEX-WI4N-1426-SM-3LK7H 45.9
GTEX-VJWN-0726-SM-3GIJ8 45.8
GTEX-132NY-0826-SM-5K7Y7 45.4
GTEX-146FH-0826-SM-5SI8T 44.7
GTEX-13O3O-0826-SM-5K7WE 44.5
GTEX-ZDXO-0126-SM-5S2ND 43.7
GTEX-REY6-2426-SM-48FF5 42.7
GTEX-13O3P-0826-SM-5L3DH 42.5
GTEX-ZDYS-1126-SM-5K7UB 42.2
GTEX-Y5V6-2126-SM-4WWFX 42.1
GTEX-ZY6K-1626-SM-5GZWV 42.1
GTEX-TKQ2-1826-SM-33HB2 42.0
GTEX-S32W-2026-SM-4AD6E 41.9
GTEX-13NZ9-1026-SM-5MR5K 41.8
GTEX-11OF3-1926-SM-59889 41.4
GTEX-SE5C-2126-SM-4BRUJ 40.6
GTEX-12WSN-1326-SM-5GCNT 40.4
GTEX-S4Q7-1126-SM-4AD6R 39.6
GTEX-13N1W-0626-SM-5MR4U 39.5
GTEX-13PVQ-1026-SM-5KM3M 39.3
GTEX-W5X1-2326-SM-3GIL6 39.2
GTEX-13CF3-2126-SM-5IFJP 39.1
GTEX-13NZ8-0126-SM-5IJCT 38.4
GTEX-YEC3-1026-SM-5IFI5 38.3
GTEX-13W46-0826-SM-5LU3H 38.2
GTEX-YFCO-1826-SM-4W1YH 38.0
GTEX-Y114-2026-SM-4TT7L 37.5
GTEX-1117F-2826-SM-5GZXL 37.4
GTEX-11DZ1-0326-SM-5N9BN 37.4
GTEX-ZVT4-1026-SM-57WC4 37.3
GTEX-1211K-1926-SM-5EQLB 36.8
GTEX-1122O-1226-SM-5H113 35.8
GTEX-117YX-1426-SM-5H12H 35.8
GTEX-11O72-2126-SM-5N9FO 35.6
GTEX-ZU9S-1926-SM-5NQBP 35.6
GTEX-XV7Q-2326-SM-4BRVZ 35.5
GTEX-139T6-1626-SM-5PNYZ 35.2
GTEX-VUSG-2226-SM-4KKZO 35.2
GTEX-ZDTT-2126-SM-5S2OJ 35.1
GTEX-ZQG8-0726-SM-5P9H9 35.1
GTEX-13113-1726-SM-5GCOO 34.9
GTEX-ZWKS-2826-SM-5NQ74 34.7
GTEX-13W3W-1226-SM-5LU4H 34.5
GTEX-S341-1526-SM-4AD6K 34.4
GTEX-ZV6S-1826-SM-5NQ8D 34.4
GTEX-ZYW4-0826-SM-5GIDG 34.2
GTEX-WXYG-2226-SM-4E3IM 34.1
GTEX-13FTW-1426-SM-5LZWZ 33.7
GTEX-1314G-1226-SM-5BC6D 33.5
GTEX-QMRM-1626-SM-4R1KV 33.5
GTEX-WY7C-2726-SM-3NB3P 33.4
GTEX-QEG5-0726-SM-4R1JQ 33.2
GTEX-ZVZQ-0826-SM-51MRF 33.2
GTEX-ZEX8-2226-SM-57WC6 33.1
GTEX-11TT1-2126-SM-5GU5Y 33.0
GTEX-11NSD-0926-SM-5N9DR 32.9
GTEX-144GL-2026-SM-5LU3O 32.7
GTEX-ZV7C-1826-SM-5NQ83 32.3
GTEX-145ME-1526-SM-5Q5F2 32.2
GTEX-S4P3-1326-SM-4AD6V 32.2
GTEX-ZZPU-0626-SM-5E43T 32.0
GTEX-11DXY-2326-SM-5GICW 31.8
GTEX-1313W-0826-SM-5EQ4T 31.7
GTEX-S7SE-0826-SM-4AT4D 31.7
GTEX-ZYFC-0826-SM-5E44K 31.7
GTEX-11NV4-2026-SM-5N9DG 31.6
GTEX-R53T-1526-SM-48FEK 31.6
GTEX-12WSM-1726-SM-5BC6J 31.0
GTEX-ZPIC-1126-SM-5BC7F 31.0
GTEX-TMMY-0726-SM-33HBE 30.7
GTEX-11P81-1926-SM-5BC53 30.4
GTEX-ZYWO-2326-SM-5GZY4 30.4
GTEX-13FHO-0826-SM-5L3E8 30.2
GTEX-144GM-0926-SM-5O994 30.2
GTEX-Y9LG-1426-SM-5IFJZ 30.2
GTEX-ZF3C-2326-SM-5S2MZ 30.2
GTEX-11ZTT-2326-SM-5EQLG 30.1
GTEX-13O61-1826-SM-5KM4I 30.1
GTEX-SIU7-1626-SM-4BRUK 30.1
GTEX-145MN-1926-SM-5SIAI 30.0
GTEX-UTHO-1026-SM-3GAF7 30.0
GTEX-WYJK-1326-SM-3NB2T 30.0
GTEX-ZAB4-2526-SM-5HL8M 30.0
GTEX-T6MN-0726-SM-32PML 29.9
GTEX-XBED-1626-SM-47JYN 29.9
GTEX-13OW8-0226-SM-5K7UP 29.7
GTEX-11ONC-2126-SM-5HL6E 29.6
GTEX-11P7K-0726-SM-5EGKX 29.6
GTEX-XUJ4-1926-SM-4BOOV 29.4
GTEX-13PL6-2926-SM-5L3I2 29.2
GTEX-11ZUS-0826-SM-5FQUY 29.1
GTEX-WYBS-0926-SM-3NM94 29.0
GTEX-X4EP-2926-SM-3P5YQ 29.0
GTEX-ZTTD-1026-SM-51MRD 29.0
GTEX-14753-2426-SM-5LU8U 28.8
GTEX-11LCK-2426-SM-5HL5F 28.5
GTEX-Q2AG-0326-SM-48U1O 28.5
GTEX-111YS-1926-SM-5GICC 28.4
GTEX-RWS6-1926-SM-47JXY 28.3
GTEX-WRHU-0326-SM-3MJFY 28.3
GTEX-11WQC-1726-SM-5GU4W 28.2
GTEX-147F4-2826-SM-5NQBN 28.1
GTEX-QVJO-1826-SM-447C9 27.9
GTEX-UJHI-1426-SM-3DB9C 27.9
GTEX-YB5K-1626-SM-5IFIN 27.9
GTEX-R55D-0826-SM-48FEA 27.8
GTEX-ZLV1-1426-SM-4WWES 27.8
GTEX-UPK5-2326-SM-3P5Z8 27.5
GTEX-13N11-1726-SM-5J1OJ 27.4
GTEX-ZT9W-2026-SM-51MRA 27.4
GTEX-11DXW-0626-SM-5N9ER 27.2
GTEX-11EI6-0626-SM-5985T 27.2
GTEX-13QIC-2326-SM-5LU5N 27.1
GTEX-Y5V5-2126-SM-4WWFO 27.1
GTEX-ZTX8-1226-SM-4YCE9 27.1
GTEX-13D11-1026-SM-5IJFB 26.8
GTEX-11I78-2226-SM-5PNYA 26.7
GTEX-R3RS-0626-SM-48FE1 26.7
GTEX-145LT-0726-SM-5S2VM 26.5
GTEX-XUW1-2326-SM-4BOO5 26.5
GTEX-ZLFU-2126-SM-4WWEV 26.5
GTEX-145MO-0826-SM-5NQBL 26.4
GTEX-13OW5-2226-SM-5L3HC 26.3
GTEX-QDT8-0626-SM-48TYW 26.2
GTEX-12BJ1-1826-SM-5HL9N 26.1
GTEX-TML8-1226-SM-32QON 26.1
GTEX-YFC4-1426-SM-5IFJG 26.1
GTEX-XGQ4-0926-SM-4AT4U 25.9
GTEX-XQ3S-1326-SM-4BOPQ 25.8
GTEX-ZA64-1526-SM-5CVMD 25.7
GTEX-QEL4-2126-SM-447AE 25.5
GTEX-T6MO-0326-SM-32QOK 25.4
GTEX-ZF29-1926-SM-5S2P1 25.4
GTEX-Y3IK-2326-SM-4WWDT 25.3
GTEX-R55F-1726-SM-2TF4R 25.1
GTEX-XQ8I-2426-SM-4WAXY 24.9
GTEX-XUZC-1626-SM-4BRVP 24.9
GTEX-13FTX-1126-SM-5N9EN 24.7
GTEX-ZF2S-2026-SM-5E461 24.6
GTEX-ZUA1-1526-SM-59HLS 24.5
GTEX-12KS4-0126-SM-5Q5A5 24.2
GTEX-12WSB-0626-SM-59HJO 24.2
GTEX-RU72-0626-SM-46MUI 24.0
GTEX-X15G-1626-SM-3NMB3 23.9
GTEX-ZZ64-1226-SM-5E43R 23.9
GTEX-11GSO-1926-SM-5A5K3 23.7
GTEX-T2YK-2226-SM-32QPT 23.6
GTEX-ZYT6-0126-SM-5E45J 23.6
GTEX-11GS4-2126-SM-5A5KR 23.4
GTEX-ZAJG-0626-SM-5HL8X 23.4
GTEX-ZQUD-1926-SM-51MSA 23.4
GTEX-117XS-1926-SM-5GICO 23.3
GTEX-ZVT2-1826-SM-5NQ8W 23.2
GTEX-11P82-1326-SM-5HL62 23.1
GTEX-Y111-2026-SM-4SOJA 23.1
GTEX-11DXZ-1926-SM-5GZZL 22.9
GTEX-Y8E4-1626-SM-5S2MW 22.9
GTEX-T5JC-2126-SM-32PMO 22.7
GTEX-Y8LW-1626-SM-5IFHX 22.6
GTEX-U3ZN-1926-SM-4DXSG 22.5
GTEX-1192X-2326-SM-5987X 22.2
GTEX-133LE-1726-SM-5K7VQ 22.2
GTEX-1269C-2426-SM-5FQSN 22.1
GTEX-13NZB-2126-SM-5MR4Y 22.1
GTEX-XOT4-0726-SM-4GIAW 21.9
GTEX-U3ZH-1426-SM-4DXSR 21.6
GTEX-11EMC-2026-SM-5A5JV 21.4
GTEX-ZC5H-2626-SM-5J2MG 21.3
GTEX-ZXES-0826-SM-5E43C 20.8
GTEX-Y5LM-1726-SM-4VDSX 20.7
GTEX-139TU-0626-SM-5KM3X 20.6
GTEX-XMD2-0926-SM-4WWEF 20.6
GTEX-YB5E-1726-SM-5IFJ3 20.4
GTEX-ZVTK-0326-SM-51MRR 20.1
GTEX-PSDG-1626-SM-48TCQ 20.0
GTEX-139T8-0826-SM-5L3DE 19.9
GTEX-13CF2-2026-SM-5K7VI 19.2
GTEX-ZVE2-1226-SM-5NQ8R 19.2
GTEX-XMD1-0826-SM-4AT52 18.8
GTEX-U412-1826-SM-4DXTJ 18.7
GTEX-1399U-1826-SM-5PNZ1 18.5
GTEX-WYVS-1726-SM-3NMAY 18.4
GTEX-12ZZX-1126-SM-5EGKB 18.3
GTEX-T2IS-1526-SM-32QPR 18.2
GTEX-14AS3-1626-SM-5S2OY 18.0
GTEX-11PRG-0826-SM-5EQ6A 17.7
GTEX-131YS-0626-SM-5EGKL 17.7
GTEX-11EM3-1326-SM-5N9C6 17.3
GTEX-13FTY-2226-SM-5J1ND 16.7
GTEX-S4UY-0726-SM-4AD6X 16.3
GTEX-XMK1-1126-SM-4IHJ8 15.9
GTEX-14ABY-2126-SM-5QGQZ 14.5
GTEX-131XW-0726-SM-5EGK3 14.2
GTEX-132Q8-1426-SM-5EGK7 12.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

129.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 129.4
FF:10080-102A8 77 years, female 129.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.