We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
LRRC17
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

RNA expression

HPA:17.0TPM
GTEx:6.2RPKM
FANTOM5:1.2Tags Per Million

BREAST - Annotated protein expression

 

Antibody staining

Antibody HPA030139

 

Adipocytes

Low  

Glandular cells

Medium  

Myoepithelial cells

Medium  
 
 
 

BREAST - HPA RNA-seq

Average TPM

17.0

overview Female, age 52
Sample 1
TPM: 19.5
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 25.8
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 5.0
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 17.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

6.2

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 6.2
Samples: 214

Max RPKM: 51.3
Min RPKM: 0.1
Std RPKM: 6.5
Median RPKM: 4.3
GTEX-T5JW-2026-SM-4DM63 51.3
GTEX-T5JC-2126-SM-32PMO 36.4
GTEX-13FHO-0826-SM-5L3E8 27.5
GTEX-ZF2S-2026-SM-5E461 27.2
GTEX-139T8-0826-SM-5L3DE 25.7
GTEX-13O3P-0826-SM-5L3DH 25.0
GTEX-YFC4-1426-SM-5IFJG 22.5
GTEX-11PRG-0826-SM-5EQ6A 18.7
GTEX-132NY-0826-SM-5K7Y7 17.8
GTEX-ZVT4-1026-SM-57WC4 17.8
GTEX-111YS-1926-SM-5GICC 17.6
GTEX-T6MN-0726-SM-32PML 17.3
GTEX-11DXW-0626-SM-5N9ER 16.8
GTEX-131XW-0726-SM-5EGK3 16.5
GTEX-WRHU-0326-SM-3MJFY 16.1
GTEX-1314G-1226-SM-5BC6D 15.4
GTEX-11NV4-2026-SM-5N9DG 15.1
GTEX-YB5K-1626-SM-5IFIN 14.6
GTEX-ZDXO-0126-SM-5S2ND 14.3
GTEX-Q2AG-0326-SM-48U1O 14.1
GTEX-XBED-1626-SM-47JYN 13.8
GTEX-WYVS-1726-SM-3NMAY 13.5
GTEX-14ABY-2126-SM-5QGQZ 13.4
GTEX-ZXES-0826-SM-5E43C 13.1
GTEX-ZVTK-0326-SM-51MRR 13.0
GTEX-11OF3-1926-SM-59889 12.5
GTEX-13N11-1726-SM-5J1OJ 12.4
GTEX-WYBS-0926-SM-3NM94 12.3
GTEX-S341-1526-SM-4AD6K 12.2
GTEX-1122O-1226-SM-5H113 11.5
GTEX-VUSG-2226-SM-4KKZO 11.2
GTEX-131YS-0626-SM-5EGKL 11.1
GTEX-ZF29-1926-SM-5S2P1 10.8
GTEX-ZTX8-1226-SM-4YCE9 10.8
GTEX-X15G-1626-SM-3NMB3 10.7
GTEX-XMD1-0826-SM-4AT52 10.7
GTEX-ZVE2-1226-SM-5NQ8R 10.6
GTEX-ZU9S-1926-SM-5NQBP 10.5
GTEX-ZF3C-2326-SM-5S2MZ 10.4
GTEX-147F4-2826-SM-5NQBN 10.2
GTEX-13FTY-2226-SM-5J1ND 9.9
GTEX-U3ZH-1426-SM-4DXSR 9.8
GTEX-SIU7-1626-SM-4BRUK 9.7
GTEX-XOT4-0726-SM-4GIAW 9.5
GTEX-ZEX8-2226-SM-57WC6 9.5
GTEX-145LT-0726-SM-5S2VM 9.4
GTEX-S33H-0326-SM-4AD6N 9.4
GTEX-11WQC-1726-SM-5GU4W 9.0
GTEX-11GS4-2126-SM-5A5KR 8.8
GTEX-QDT8-0626-SM-48TYW 8.8
GTEX-Y8LW-1626-SM-5IFHX 8.8
GTEX-ZC5H-2626-SM-5J2MG 8.7
GTEX-QEL4-2126-SM-447AE 8.6
GTEX-T2YK-2226-SM-32QPT 8.6
GTEX-TKQ2-1826-SM-33HB2 8.5
GTEX-ZVZQ-0826-SM-51MRF 8.1
GTEX-11EI6-0626-SM-5985T 8.0
GTEX-R55F-1726-SM-2TF4R 8.0
GTEX-ZYWO-2326-SM-5GZY4 8.0
GTEX-11P7K-0726-SM-5EGKX 7.7
GTEX-TMMY-0726-SM-33HBE 7.7
GTEX-W5X1-2326-SM-3GIL6 7.7
GTEX-ZYFC-0826-SM-5E44K 7.7
GTEX-S4P3-1326-SM-4AD6V 7.5
GTEX-UPK5-2326-SM-3P5Z8 7.3
GTEX-13PL6-2926-SM-5L3I2 7.2
GTEX-13CF2-2026-SM-5K7VI 7.1
GTEX-12WSB-0626-SM-59HJO 7.0
GTEX-13O3Q-2226-SM-5KM4O 7.0
GTEX-ZYW4-0826-SM-5GIDG 7.0
GTEX-1192X-2326-SM-5987X 6.7
GTEX-RWS6-1926-SM-47JXY 6.7
GTEX-XV7Q-2326-SM-4BRVZ 6.4
GTEX-11DXZ-1926-SM-5GZZL 6.3
GTEX-11EMC-2026-SM-5A5JV 6.3
GTEX-13OW8-0226-SM-5K7UP 6.3
GTEX-YJ8O-2226-SM-5IFHW 6.3
GTEX-ZZPU-0626-SM-5E43T 6.3
GTEX-132Q8-1426-SM-5EGK7 6.1
GTEX-13O3O-0826-SM-5K7WE 5.9
GTEX-13OW5-2226-SM-5L3HC 5.9
GTEX-XQ3S-1326-SM-4BOPQ 5.8
GTEX-11DXY-2326-SM-5GICW 5.7
GTEX-WYJK-1326-SM-3NB2T 5.6
GTEX-WOFL-0826-SM-3MJG1 5.5
GTEX-TML8-1226-SM-32QON 5.4
GTEX-11P81-1926-SM-5BC53 5.3
GTEX-ZPIC-1126-SM-5BC7F 5.3
GTEX-13QIC-2326-SM-5LU5N 5.2
GTEX-S7SE-0826-SM-4AT4D 5.2
GTEX-R3RS-0626-SM-48FE1 5.0
GTEX-Y111-2026-SM-4SOJA 4.9
GTEX-T2IS-1526-SM-32QPR 4.8
GTEX-ZVT2-1826-SM-5NQ8W 4.8
GTEX-12WSK-2226-SM-5GCO5 4.7
GTEX-12WSM-1726-SM-5BC6J 4.7
GTEX-1313W-0826-SM-5EQ4T 4.7
GTEX-1399U-1826-SM-5PNZ1 4.7
GTEX-13NZ9-1026-SM-5MR5K 4.7
GTEX-13W3W-1226-SM-5LU4H 4.7
GTEX-S4UY-0726-SM-4AD6X 4.7
GTEX-11TT1-2126-SM-5GU5Y 4.5
GTEX-WXYG-2226-SM-4E3IM 4.5
GTEX-U3ZN-1926-SM-4DXSG 4.4
GTEX-Y3IK-2326-SM-4WWDT 4.4
GTEX-ZUA1-1526-SM-59HLS 4.4
GTEX-139TU-0626-SM-5KM3X 4.3
GTEX-XUJ4-1926-SM-4BOOV 4.3
GTEX-XYKS-1326-SM-4BRUN 4.2
GTEX-Y114-2026-SM-4TT7L 4.2
GTEX-ZY6K-1626-SM-5GZWV 4.2
GTEX-ZYT6-0126-SM-5E45J 4.1
GTEX-11EM3-1326-SM-5N9C6 4.0
GTEX-13N1W-0626-SM-5MR4U 4.0
GTEX-133LE-1726-SM-5K7VQ 3.8
GTEX-117XS-1926-SM-5GICO 3.7
GTEX-12KS4-0126-SM-5Q5A5 3.7
GTEX-UJHI-1426-SM-3DB9C 3.7
GTEX-12ZZX-1126-SM-5EGKB 3.6
GTEX-QVJO-1826-SM-447C9 3.6
GTEX-12WSN-1326-SM-5GCNT 3.5
GTEX-ZTTD-1026-SM-51MRD 3.5
GTEX-11ZUS-0826-SM-5FQUY 3.4
GTEX-145MN-1926-SM-5SIAI 3.4
GTEX-146FH-0826-SM-5SI8T 3.4
GTEX-RU72-0626-SM-46MUI 3.4
GTEX-144GL-2026-SM-5LU3O 3.2
GTEX-Y3I4-1526-SM-4TT7K 3.2
GTEX-117YX-1426-SM-5H12H 3.1
GTEX-13113-1726-SM-5GCOO 3.1
GTEX-ZAB4-2526-SM-5HL8M 3.0
GTEX-QEG5-0726-SM-4R1JQ 2.9
GTEX-13NZB-2126-SM-5MR4Y 2.8
GTEX-Y5LM-1726-SM-4VDSX 2.7
GTEX-1269C-2426-SM-5FQSN 2.6
GTEX-T6MO-0326-SM-32QOK 2.6
GTEX-X4EP-2926-SM-3P5YQ 2.6
GTEX-XUW1-2326-SM-4BOO5 2.6
GTEX-XUZC-1626-SM-4BRVP 2.6
GTEX-Y5V5-2126-SM-4WWFO 2.6
GTEX-ZLV1-1426-SM-4WWES 2.6
GTEX-ZV7C-1826-SM-5NQ83 2.6
GTEX-11GSO-1926-SM-5A5K3 2.5
GTEX-11I78-2226-SM-5PNYA 2.5
GTEX-WI4N-1426-SM-3LK7H 2.5
GTEX-WY7C-2726-SM-3NB3P 2.5
GTEX-WFON-1826-SM-3GILG 2.4
GTEX-VJWN-0726-SM-3GIJ8 2.3
GTEX-XMD2-0926-SM-4WWEF 2.3
GTEX-11ONC-2126-SM-5HL6E 2.2
GTEX-1211K-1926-SM-5EQLB 2.2
GTEX-145MO-0826-SM-5NQBL 2.2
GTEX-11LCK-2426-SM-5HL5F 2.1
GTEX-13FTX-1126-SM-5N9EN 2.1
GTEX-11EQ9-1826-SM-5Q5AJ 2.0
GTEX-13NZ8-0126-SM-5IJCT 2.0
GTEX-11O72-2126-SM-5N9FO 1.8
GTEX-13D11-1026-SM-5IJFB 1.8
GTEX-ZAJG-0626-SM-5HL8X 1.8
GTEX-ZQUD-1926-SM-51MSA 1.8
GTEX-1117F-2826-SM-5GZXL 1.7
GTEX-11NSD-0926-SM-5N9DR 1.7
GTEX-139T6-1626-SM-5PNYZ 1.7
GTEX-14753-2426-SM-5LU8U 1.7
GTEX-U412-1826-SM-4DXTJ 1.7
GTEX-XMK1-1126-SM-4IHJ8 1.7
GTEX-11TUW-1826-SM-5BC5D 1.6
GTEX-YB5E-1726-SM-5IFJ3 1.6
GTEX-R53T-1526-SM-48FEK 1.5
GTEX-SE5C-2126-SM-4BRUJ 1.5
GTEX-Y5V6-2126-SM-4WWFX 1.5
GTEX-Y9LG-1426-SM-5IFJZ 1.5
GTEX-14AS3-1626-SM-5S2OY 1.4
GTEX-S32W-2026-SM-4AD6E 1.4
GTEX-13PVQ-1026-SM-5KM3M 1.3
GTEX-QMRM-1626-SM-4R1KV 1.3
GTEX-X4XY-0926-SM-4E3JD 1.3
GTEX-ZWKS-2826-SM-5NQ74 1.3
GTEX-11ZTT-2326-SM-5EQLG 1.2
GTEX-132AR-0826-SM-5EGK6 1.2
GTEX-13W46-0826-SM-5LU3H 1.2
GTEX-ZDTT-2126-SM-5S2OJ 1.2
GTEX-ZV6S-1826-SM-5NQ8D 1.2
GTEX-13FTW-1426-SM-5LZWZ 1.1
GTEX-R55D-0826-SM-48FEA 1.1
GTEX-X261-0626-SM-3NMD9 1.1
GTEX-ZA64-1526-SM-5CVMD 1.1
GTEX-13O61-1826-SM-5KM4I 1.0
GTEX-145ME-1526-SM-5Q5F2 1.0
GTEX-S4Q7-1126-SM-4AD6R 1.0
GTEX-ZLFU-2126-SM-4WWEV 1.0
GTEX-XQ8I-2426-SM-4WAXY 0.9
GTEX-YFCO-1826-SM-4W1YH 0.9
GTEX-12BJ1-1826-SM-5HL9N 0.8
GTEX-UTHO-1026-SM-3GAF7 0.8
GTEX-Y8E4-1626-SM-5S2MW 0.7
GTEX-ZDYS-1126-SM-5K7UB 0.7
GTEX-ZQG8-0726-SM-5P9H9 0.7
GTEX-11DZ1-0326-SM-5N9BN 0.6
GTEX-13S86-1226-SM-5S2OA 0.6
GTEX-PSDG-1626-SM-48TCQ 0.6
GTEX-RUSQ-2026-SM-4GIAK 0.6
GTEX-XGQ4-0926-SM-4AT4U 0.6
GTEX-ZZ64-1226-SM-5E43R 0.6
GTEX-11WQK-2426-SM-5GU5C 0.5
GTEX-YEC3-1026-SM-5IFI5 0.5
GTEX-11P82-1326-SM-5HL62 0.4
GTEX-13CF3-2126-SM-5IFJP 0.3
GTEX-14E6E-1326-SM-5S2NR 0.3
GTEX-REY6-2426-SM-48FF5 0.3
GTEX-144GM-0926-SM-5O994 0.2
GTEX-TKQ1-0226-SM-33HB5 0.2
GTEX-ZT9W-2026-SM-51MRA 0.2
GTEX-U8XE-0826-SM-4E3J1 0.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

1.2

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 1.2
FF:10080-102A8 77 years, female 1.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.