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CSRP3
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

CSRP3

Gene description

Cysteine and glycine-rich protein 3 (cardiac LIM protein)

Protein class

Disease related genes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Group enriched (heart muscle, skeletal muscle)
GTEx:Group enriched (heart muscle, skeletal muscle)
FANTOM5:Group enriched (skeletal muscle, heart muscle)

Protein evidence

Evidence at protein level

Protein expression

Selective cytoplasmic expression in heart and skeletal muscle.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 1 antibody.
HPA042581
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Heart muscle

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (heart muscle, skeletal muscle)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (heart muscle, skeletal muscle)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (skeletal muscle, heart muscle)

GENE INFORMATION

Gene name

CSRP3 (HGNC Symbol)

Synonyms

CLP, CMD1M, MLP

Description

Cysteine and glycine-rich protein 3 (cardiac LIM protein) (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the CSRP family of LIM domain proteins, which may be involved in regulatory processes important for development and cellular differentiation. The LIM/double zinc-finger motif found in this protein is found in a group of proteins with critical functions in gene regulation, cell growth, and somatic differentiation. Mutations in this gene are thought to cause heritable forms of hypertrophic cardiomyopathy (HCM) and dilated cardiomyopathy (DCM) in humans. Alternatively spliced transcript variants with different 5' UTR, but encoding the same protein, have been found for this gene. [provided by RefSeq, Jul 2008]

Chromosome

11

Cytoband

p15.1

Chromosome location (bp)

19182030 - 19210573

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000129170 (version 83.38)

Entrez gene

8048

UniProt

P50461 (UniProt - Evidence at protein level)

neXtProt

NX_P50461

Antibodypedia

CSRP3 antibodies

PROTEIN BROWSER

CSRP3-002
CSRP3-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CSRP3-002
ENSP00000431813
ENST00000533783
P50461 [Direct mapping]
Cysteine and glycine-rich protein 3
A2TDB8 [Target identity:100%; Query identity:100%]
Cysteine and glycine-rich protein 3 (Cardiac LIM protein); Cysteine and glycine-rich protein 3 (Cardiac LIM protein), isoform CRA_a; cDNA, FLJ93801, Homo sapiens cysteine and glycine-rich protein 3 (cardiac LIMprotein) (CSRP3), mRNA
Show all
Predicted intracellular proteins
Plasma proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001974 [blood vessel remodeling]
GO:0002026 [regulation of the force of heart contraction]
GO:0003300 [cardiac muscle hypertrophy]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0006874 [cellular calcium ion homeostasis]
GO:0007519 [skeletal muscle tissue development]
GO:0008270 [zinc ion binding]
GO:0008307 [structural constituent of muscle]
GO:0030018 [Z disc]
GO:0031433 [telethonin binding]
GO:0033365 [protein localization to organelle]
GO:0035995 [detection of muscle stretch]
GO:0042805 [actinin binding]
GO:0045662 [negative regulation of myoblast differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0048738 [cardiac muscle tissue development]
GO:0055003 [cardiac myofibril assembly]
GO:0060048 [cardiac muscle contraction]
GO:1903919 [negative regulation of actin filament severing]
GO:1903920 [positive regulation of actin filament severing]
Show all
194 aa
21 kDa
No 0
CSRP3-201
ENSP00000265968
ENST00000265968
P50461 [Direct mapping]
Cysteine and glycine-rich protein 3
A2TDB8 [Target identity:100%; Query identity:100%]
Cysteine and glycine-rich protein 3 (Cardiac LIM protein); Cysteine and glycine-rich protein 3 (Cardiac LIM protein), isoform CRA_a; cDNA, FLJ93801, Homo sapiens cysteine and glycine-rich protein 3 (cardiac LIMprotein) (CSRP3), mRNA
Show all
Predicted intracellular proteins
Plasma proteins
Disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002026 [regulation of the force of heart contraction]
GO:0003300 [cardiac muscle hypertrophy]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005856 [cytoskeleton]
GO:0006874 [cellular calcium ion homeostasis]
GO:0007519 [skeletal muscle tissue development]
GO:0008270 [zinc ion binding]
GO:0008307 [structural constituent of muscle]
GO:0030018 [Z disc]
GO:0031433 [telethonin binding]
GO:0033365 [protein localization to organelle]
GO:0035995 [detection of muscle stretch]
GO:0042805 [actinin binding]
GO:0045662 [negative regulation of myoblast differentiation]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0048738 [cardiac muscle tissue development]
GO:0055003 [cardiac myofibril assembly]
GO:0060048 [cardiac muscle contraction]
GO:1903919 [negative regulation of actin filament severing]
GO:1903920 [positive regulation of actin filament severing]
Show all
194 aa
21 kDa
No 0

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