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CD68
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    TISSUE

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    CELL

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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:7.3RPKM
FANTOM5:109.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA048982

 

Antibody CAB000051

 

Antibody CAB000066

 

Antibody CAB072861

 

Antibody CAB072862

 

Glial cells

Not detected   Medium   Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Not detected   Not detected   Not detected  
         
         
         

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

7.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 7.3
Samples: 117

Max RPKM: 36.1
Min RPKM: 0.8
Std RPKM: 6.2
Median RPKM: 5
GTEX-X585-0011-R5A-SM-46MVI 36.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 30.0
GTEX-NL4W-0011-R5a-SM-2I3GD 26.0
GTEX-XMD1-0011-R5A-SM-4AT47 24.7
GTEX-X4XX-0011-R5A-SM-46MWN 23.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 20.7
GTEX-13JUV-0011-R5a-SM-5LZY5 19.7
GTEX-N7MT-0011-R5a-SM-2I3G6 18.6
GTEX-132Q8-0011-R5a-SM-5IJDM 18.4
GTEX-144GO-0011-R5a-SM-5PNUR 18.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 18.1
GTEX-12WSB-0011-R5b-SM-5GU67 17.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 16.9
GTEX-OHPN-0011-R5A-SM-2I5FF 14.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 13.0
GTEX-13X6I-0011-R5a-SM-5PNWW 12.6
GTEX-13OW5-0011-R5b-SM-5L3FR 12.2
GTEX-12WSF-0011-R5a-SM-5HL8K 11.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 11.3
GTEX-NL3H-0011-R5a-SM-2I3GB 10.9
GTEX-WWYW-0011-R5A-SM-3NB3E 10.9
GTEX-RVPV-0011-R5A-SM-2TF69 10.8
GTEX-1477Z-0011-R5b-SM-5PNUO 10.7
GTEX-QVJO-0011-R5A-SM-2S1QM 10.4
GTEX-11H98-0011-R5b-SM-57WCF 10.2
GTEX-12WSA-0011-R5b-SM-5GU5I 9.0
GTEX-T5JC-0011-R5A-SM-32PLK 9.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 8.9
GTEX-TSE9-0011-R5A-SM-3DB7J 8.5
GTEX-R55E-0011-R5A-SM-2TC5N 8.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 8.2
GTEX-14BIM-0011-R5b-SM-5S2RM 8.2
GTEX-139TS-0011-R5b-SM-5J2MZ 8.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 8.1
GTEX-1399T-0011-R5b-SM-5IJDK 7.8
GTEX-13OVH-0011-R5b-SM-5KM4L 7.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 7.8
GTEX-13OW6-0011-R5a-SM-5O9BK 7.7
GTEX-13NYS-0011-R5a-SM-5MR4D 7.6
GTEX-OXRN-0011-R5A-SM-2I5EF 7.2
GTEX-11GSP-0011-R5a-SM-57WBE 7.1
GTEX-11NV4-0011-R5a-SM-5NQ88 6.9
GTEX-145LS-0011-R5a-SM-5SI65 6.8
GTEX-RVPU-0011-R5A-SM-2XCAD 6.7
GTEX-11OF3-0011-R5a-SM-57WB4 6.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 6.6
GTEX-13G51-0011-R5a-SM-5L3EB 6.5
GTEX-X261-0011-R5A-SM-3NMB4 6.5
GTEX-13VXU-0011-R5a-SM-5O9D7 6.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 6.4
GTEX-13CZV-0011-R5a-SM-5K7XA 6.0
GTEX-WL46-0011-R5A-SM-3LK6V 6.0
GTEX-13X6K-0011-R5b-SM-5PNUE 5.9
GTEX-13CIG-0011-R5b-SM-5L3F2 5.7
GTEX-14ABY-0011-R5b-SM-5SI7B 5.5
GTEX-N7MS-0011-R5a-SM-2HMK8 5.5
GTEX-131YS-0011-R5b-SM-5K7YB 5.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 5.1
GTEX-1445S-0011-R5a-SM-5PNUS 5.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 5.0
GTEX-13FLV-0011-R5a-SM-5LZWT 4.9
GTEX-145MH-0011-R5a-SM-5P9JT 4.7
GTEX-NPJ7-0011-R5a-SM-33HBK 4.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 4.5
GTEX-1313W-0011-R5b-SM-5L3EP 4.4
GTEX-QMR6-0011-R5A-SM-32PKT 4.4
GTEX-S7SE-0011-R5A-SM-2XCDA 4.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 4.3
GTEX-11WQC-0011-R5a-SM-5BC74 4.2
GTEX-YFC4-0011-R5a-SM-4RGLR 4.2
GTEX-ZXG5-0011-R5b-SM-57WBN 4.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 4.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 4.0
GTEX-12WSD-0011-R5b-SM-5CVNG 3.9
GTEX-UTHO-0011-R5A-SM-3GIJD 3.9
GTEX-12WSC-0011-R5b-SM-5CVNS 3.8
GTEX-RU72-0011-R5A-SM-2TF6U 3.8
GTEX-Z93S-0011-R5b-SM-4RGNI 3.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 3.7
GTEX-13FLW-0011-R5a-SM-5LZX6 3.7
GTEX-ZUA1-0011-R5b-SM-51MTG 3.7
GTEX-13S7M-0011-R5b-SM-5P9HS 3.6
GTEX-ZVT3-0011-R5a-SM-51MSI 3.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 3.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 3.4
GTEX-13JVG-0011-R5a-SM-5MR4O 3.3
GTEX-13OVL-0011-R5b-SM-5L3FU 3.3
GTEX-13OW7-0011-R5b-SM-5O9DM 3.3
GTEX-YJ89-0011-R5a-SM-4V6GM 3.3
GTEX-12WSH-0011-R5b-SM-5P9F3 3.2
GTEX-13X6J-0011-R5b-SM-5PNWT 3.0
GTEX-12ZZX-0011-R5a-SM-5HL89 2.9
GTEX-13FXS-0011-R5b-SM-5LZYE 2.9
GTEX-13NZA-0011-R5b-SM-5KM4K 2.9
GTEX-P44H-0011-R5A-SM-2XCEX 2.8
GTEX-13SLX-0011-R5a-SM-5O9BV 2.7
GTEX-T6MN-0011-R5A-SM-32QPD 2.7
GTEX-WZTO-0011-R5B-SM-3NMC5 2.7
GTEX-ZE7O-0011-R5a-SM-57WBO 2.7
GTEX-ZV68-0011-R5a-SM-4YCDW 2.7
GTEX-13O3O-0011-R5b-SM-5KM44 2.6
GTEX-144GL-0011-R5b-SM-5PNUJ 2.5
GTEX-139T8-0011-R5b-SM-5J1MO 2.4
GTEX-13FHP-0011-R5b-SM-5LZY2 2.4
GTEX-PVOW-0011-R5A-SM-32PL7 2.4
GTEX-T2IS-0011-R5A-SM-32QP4 2.4
GTEX-WVLH-0011-R5A-SM-3MJFW 2.4
GTEX-139TT-0011-R5b-SM-5K7W8 2.2
GTEX-S7PM-0011-R5A-SM-3NM8G 2.2
GTEX-14BIN-0011-R5b-SM-5SI78 1.9
GTEX-13NYB-0011-R5a-SM-5MR45 1.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 1.8
GTEX-XOTO-0011-R5A-SM-4B657 1.8
GTEX-13112-0011-R5b-SM-5DUV8 1.7
GTEX-11UD1-0011-R5b-SM-5P9FP 1.1
GTEX-13CF2-0011-R5a-SM-5LZWS 1.1
GTEX-145MG-0011-R5b-SM-5S2VU 0.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

109.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 109.0
FF:10164-103B2 76 years, female 122.6
FF:10379-105H1 89 years, female 95.5

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