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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:118.3TPM
GTEx:60.4RPKM
FANTOM5:198.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Low
Fibroblasts:Low
Adipocytes:Not detected
 

Antibody staining

Antibody HPA041940

  

Antibody HPA043560

  

Antibody CAB004465

  

Chondrocytes

 Low   Not detected   Medium  

Fibroblasts

 Medium   Not detected   Medium  

Adipocytes

 Not detected   Low  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA041940

  

Antibody HPA043560

  

Antibody CAB004465

  

Adipocytes

 Low   Not detected   Not detected  

Fibroblasts

 Medium   Low   Medium  

Peripheral nerve

 Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

118.3
N/A Female, age 80
Sample 1
TPM: 170.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 93.2
N/A Female, age 57
Sample 3
TPM: 99.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 117.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 110.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

60.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 60.4
Samples: 350

Max RPKM: 87.7
Min RPKM: 37.3
Std RPKM: 9.3
Median RPKM: 59.3
GTEX-13NYS-0226-SM-5MR49 87.7
GTEX-XBEC-0326-SM-4AT4M 87.0
GTEX-139T8-0226-SM-5L3EA 84.4
GTEX-W5X1-2626-SM-4LMI8 83.4
GTEX-14BMV-0226-SM-5S2N2 82.7
GTEX-Q734-1826-SM-2I3EL 81.4
GTEX-XMD2-0226-SM-4WWEE 80.3
GTEX-ZYW4-0226-SM-5E44M 79.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 60.3
Samples: 227

Max RPKM: 90.5
Min RPKM: 33
Std RPKM: 11.7
Median RPKM: 60
GTEX-139D8-1626-SM-5IJFZ 90.5
GTEX-13OVH-1126-SM-5K7YP 89.9
GTEX-13IVO-2426-SM-5K7V9 85.7
GTEX-14DAQ-2526-SM-5RQIO 85.1
GTEX-WWTW-1326-SM-4MVNT 84.6
GTEX-131YS-1726-SM-5HL7G 84.0
GTEX-XLM4-1026-SM-4AT51 83.7
GTEX-13PDP-1226-SM-5K7TW 82.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

198.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 198.7
FF:10010-101C1 65,65,76 years, mixed 198.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.