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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:110.5TPM
GTEx:68.5RPKM
FANTOM5:155.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA041940

 

Antibody HPA043560

 

Antibody CAB004465

 

Adipocytes

Not detected   Not detected   Low  

Glandular cells

Medium   Medium   High  

Myoepithelial cells

Medium   Low   High  
     
     
     

BREAST - HPA RNA-seq

Average TPM

110.5

overview Female, age 52
Sample 1
TPM: 130.9
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 89.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 101.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 120.6
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

68.5

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 68.5
Samples: 214

Max RPKM: 121.9
Min RPKM: 38.9
Std RPKM: 14.6
Median RPKM: 67
GTEX-131YS-0626-SM-5EGKL 121.9
GTEX-139T8-0826-SM-5L3DE 105.2
GTEX-13NZB-2126-SM-5MR4Y 104.4
GTEX-13PL6-2926-SM-5L3I2 104.4
GTEX-131XW-0726-SM-5EGK3 103.3
GTEX-ZC5H-2626-SM-5J2MG 103.3
GTEX-YFC4-1426-SM-5IFJG 101.5
GTEX-QDT8-0626-SM-48TYW 96.7
GTEX-139TU-0626-SM-5KM3X 95.6
GTEX-11PRG-0826-SM-5EQ6A 95.1
GTEX-1399U-1826-SM-5PNZ1 94.9
GTEX-ZAJG-0626-SM-5HL8X 94.8
GTEX-ZXES-0826-SM-5E43C 94.4
GTEX-13D11-1026-SM-5IJFB 92.8
GTEX-13FTY-2226-SM-5J1ND 92.8
GTEX-XMD1-0826-SM-4AT52 92.4
GTEX-13FHO-0826-SM-5L3E8 92.3
GTEX-133LE-1726-SM-5K7VQ 92.2
GTEX-ZF2S-2026-SM-5E461 92.1
GTEX-Y5LM-1726-SM-4VDSX 91.3
GTEX-11EM3-1326-SM-5N9C6 90.7
GTEX-12ZZX-1126-SM-5EGKB 90.0
GTEX-XUJ4-1926-SM-4BOOV 89.0
GTEX-UJHI-1426-SM-3DB9C 88.7
GTEX-11EMC-2026-SM-5A5JV 87.6
GTEX-ZVE2-1226-SM-5NQ8R 87.1
GTEX-13NZ9-1026-SM-5MR5K 86.2
GTEX-11WQC-1726-SM-5GU4W 86.1
GTEX-13O3P-0826-SM-5L3DH 86.1
GTEX-13W3W-1226-SM-5LU4H 84.3
GTEX-145LT-0726-SM-5S2VM 83.9
GTEX-ZVTK-0326-SM-51MRR 83.5
GTEX-Y3IK-2326-SM-4WWDT 83.4
GTEX-Q2AG-0326-SM-48U1O 83.2
GTEX-R3RS-0626-SM-48FE1 83.0
GTEX-U3ZN-1926-SM-4DXSG 83.0
GTEX-14ABY-2126-SM-5QGQZ 82.7
GTEX-U3ZH-1426-SM-4DXSR 81.4
GTEX-T5JW-2026-SM-4DM63 80.1
GTEX-RWS6-1926-SM-47JXY 79.9
GTEX-147F4-2826-SM-5NQBN 79.5
GTEX-13N11-1726-SM-5J1OJ 79.3
GTEX-13QIC-2326-SM-5LU5N 79.3
GTEX-11TT1-2126-SM-5GU5Y 78.5
GTEX-T2IS-1526-SM-32QPR 78.5
GTEX-WYVS-1726-SM-3NMAY 78.5
GTEX-11P81-1926-SM-5BC53 78.4
GTEX-ZLV1-1426-SM-4WWES 78.2
GTEX-11GS4-2126-SM-5A5KR 78.0
GTEX-X15G-1626-SM-3NMB3 78.0
GTEX-S341-1526-SM-4AD6K 77.9
GTEX-XMD2-0926-SM-4WWEF 77.6
GTEX-VUSG-2226-SM-4KKZO 77.3
GTEX-12WSK-2226-SM-5GCO5 77.0
GTEX-132AR-0826-SM-5EGK6 76.8
GTEX-11P7K-0726-SM-5EGKX 76.7
GTEX-14AS3-1626-SM-5S2OY 76.4
GTEX-1192X-2326-SM-5987X 76.2
GTEX-X4EP-2926-SM-3P5YQ 76.0
GTEX-ZEX8-2226-SM-57WC6 75.8
GTEX-13CF2-2026-SM-5K7VI 75.7
GTEX-T5JC-2126-SM-32PMO 75.7
GTEX-SIU7-1626-SM-4BRUK 75.6
GTEX-ZTX8-1226-SM-4YCE9 75.5
GTEX-ZVT2-1826-SM-5NQ8W 75.3
GTEX-Y5V5-2126-SM-4WWFO 75.2
GTEX-T2YK-2226-SM-32QPT 74.6
GTEX-WYBS-0926-SM-3NM94 74.5
GTEX-ZAB4-2526-SM-5HL8M 74.4
GTEX-RU72-0626-SM-46MUI 74.3
GTEX-ZZPU-0626-SM-5E43T 74.2
GTEX-13113-1726-SM-5GCOO 73.8
GTEX-ZY6K-1626-SM-5GZWV 73.7
GTEX-ZF29-1926-SM-5S2P1 73.6
GTEX-ZVT4-1026-SM-57WC4 73.5
GTEX-XUW1-2326-SM-4BOO5 73.2
GTEX-145MN-1926-SM-5SIAI 72.7
GTEX-XUZC-1626-SM-4BRVP 72.5
GTEX-QEG5-0726-SM-4R1JQ 72.1
GTEX-WOFL-0826-SM-3MJG1 72.0
GTEX-ZYWO-2326-SM-5GZY4 71.9
GTEX-S4P3-1326-SM-4AD6V 71.6
GTEX-S4UY-0726-SM-4AD6X 71.6
GTEX-11EI6-0626-SM-5985T 71.5
GTEX-11GSO-1926-SM-5A5K3 70.8
GTEX-XBED-1626-SM-47JYN 70.8
GTEX-1211K-1926-SM-5EQLB 70.7
GTEX-12WSB-0626-SM-59HJO 70.7
GTEX-ZU9S-1926-SM-5NQBP 70.6
GTEX-ZVZQ-0826-SM-51MRF 70.6
GTEX-UPK5-2326-SM-3P5Z8 70.1
GTEX-11EQ9-1826-SM-5Q5AJ 69.7
GTEX-1269C-2426-SM-5FQSN 69.6
GTEX-Y8LW-1626-SM-5IFHX 69.4
GTEX-ZYW4-0826-SM-5GIDG 69.3
GTEX-1122O-1226-SM-5H113 69.1
GTEX-1117F-2826-SM-5GZXL 68.7
GTEX-XYKS-1326-SM-4BRUN 68.2
GTEX-11NV4-2026-SM-5N9DG 68.1
GTEX-SE5C-2126-SM-4BRUJ 68.0
GTEX-132Q8-1426-SM-5EGK7 67.7
GTEX-13NZ8-0126-SM-5IJCT 67.6
GTEX-13OW5-2226-SM-5L3HC 67.6
GTEX-WRHU-0326-SM-3MJFY 67.6
GTEX-QVJO-1826-SM-447C9 67.5
GTEX-XOT4-0726-SM-4GIAW 67.4
GTEX-T6MO-0326-SM-32QOK 67.0
GTEX-WI4N-1426-SM-3LK7H 67.0
GTEX-111YS-1926-SM-5GICC 66.6
GTEX-11I78-2226-SM-5PNYA 66.4
GTEX-1314G-1226-SM-5BC6D 66.4
GTEX-146FH-0826-SM-5SI8T 66.3
GTEX-TMMY-0726-SM-33HBE 66.2
GTEX-13O3O-0826-SM-5K7WE 66.1
GTEX-WYJK-1326-SM-3NB2T 65.8
GTEX-139T6-1626-SM-5PNYZ 65.6
GTEX-Y8E4-1626-SM-5S2MW 65.6
GTEX-11DXW-0626-SM-5N9ER 65.4
GTEX-11ONC-2126-SM-5HL6E 65.1
GTEX-132NY-0826-SM-5K7Y7 65.0
GTEX-R53T-1526-SM-48FEK 64.8
GTEX-ZTTD-1026-SM-51MRD 64.6
GTEX-ZV6S-1826-SM-5NQ8D 64.5
GTEX-11ZUS-0826-SM-5FQUY 64.3
GTEX-T6MN-0726-SM-32PML 64.3
GTEX-12KS4-0126-SM-5Q5A5 63.9
GTEX-117YX-1426-SM-5H12H 63.6
GTEX-QEL4-2126-SM-447AE 63.6
GTEX-13FTW-1426-SM-5LZWZ 63.5
GTEX-WXYG-2226-SM-4E3IM 63.3
GTEX-11NSD-0926-SM-5N9DR 63.2
GTEX-13W46-0826-SM-5LU3H 63.1
GTEX-11OF3-1926-SM-59889 62.9
GTEX-YB5K-1626-SM-5IFIN 62.7
GTEX-ZPIC-1126-SM-5BC7F 62.7
GTEX-ZF3C-2326-SM-5S2MZ 62.3
GTEX-1313W-0826-SM-5EQ4T 62.2
GTEX-ZUA1-1526-SM-59HLS 62.0
GTEX-S32W-2026-SM-4AD6E 61.8
GTEX-13O3Q-2226-SM-5KM4O 61.7
GTEX-TML8-1226-SM-32QON 61.4
GTEX-W5X1-2326-SM-3GIL6 61.3
GTEX-XQ3S-1326-SM-4BOPQ 61.2
GTEX-Y3I4-1526-SM-4TT7K 61.2
GTEX-13S86-1226-SM-5S2OA 60.9
GTEX-U412-1826-SM-4DXTJ 60.9
GTEX-Y114-2026-SM-4TT7L 60.8
GTEX-12WSN-1326-SM-5GCNT 60.7
GTEX-11LCK-2426-SM-5HL5F 60.6
GTEX-YFCO-1826-SM-4W1YH 60.6
GTEX-ZA64-1526-SM-5CVMD 60.4
GTEX-X261-0626-SM-3NMD9 60.3
GTEX-XV7Q-2326-SM-4BRVZ 60.3
GTEX-XGQ4-0926-SM-4AT4U 59.8
GTEX-ZV7C-1826-SM-5NQ83 59.8
GTEX-12BJ1-1826-SM-5HL9N 59.4
GTEX-ZDYS-1126-SM-5K7UB 59.3
GTEX-ZYT6-0126-SM-5E45J 59.3
GTEX-11DXZ-1926-SM-5GZZL 58.7
GTEX-Y5V6-2126-SM-4WWFX 58.6
GTEX-R55F-1726-SM-2TF4R 58.5
GTEX-Y9LG-1426-SM-5IFJZ 58.0
GTEX-S4Q7-1126-SM-4AD6R 57.8
GTEX-ZWKS-2826-SM-5NQ74 57.4
GTEX-13CF3-2126-SM-5IFJP 57.2
GTEX-ZDXO-0126-SM-5S2ND 57.1
GTEX-VJWN-0726-SM-3GIJ8 56.2
GTEX-11DZ1-0326-SM-5N9BN 56.1
GTEX-S7SE-0826-SM-4AT4D 56.1
GTEX-144GL-2026-SM-5LU3O 55.8
GTEX-X4XY-0926-SM-4E3JD 55.5
GTEX-ZDTT-2126-SM-5S2OJ 55.2
GTEX-Y111-2026-SM-4SOJA 54.7
GTEX-XMK1-1126-SM-4IHJ8 54.3
GTEX-13OW8-0226-SM-5K7UP 54.2
GTEX-WY7C-2726-SM-3NB3P 53.8
GTEX-QMRM-1626-SM-4R1KV 53.7
GTEX-REY6-2426-SM-48FF5 53.3
GTEX-S33H-0326-SM-4AD6N 52.9
GTEX-11DXY-2326-SM-5GICW 52.7
GTEX-117XS-1926-SM-5GICO 52.6
GTEX-11P82-1326-SM-5HL62 52.5
GTEX-145MO-0826-SM-5NQBL 52.5
GTEX-U8XE-0826-SM-4E3J1 51.7
GTEX-13O61-1826-SM-5KM4I 51.3
GTEX-R55D-0826-SM-48FEA 51.3
GTEX-XQ8I-2426-SM-4WAXY 51.3
GTEX-13N1W-0626-SM-5MR4U 51.2
GTEX-ZYFC-0826-SM-5E44K 51.1
GTEX-RUSQ-2026-SM-4GIAK 50.9
GTEX-145ME-1526-SM-5Q5F2 50.7
GTEX-11O72-2126-SM-5N9FO 50.5
GTEX-ZQG8-0726-SM-5P9H9 50.2
GTEX-WFON-1826-SM-3GILG 50.1
GTEX-13FTX-1126-SM-5N9EN 50.0
GTEX-ZLFU-2126-SM-4WWEV 49.8
GTEX-YB5E-1726-SM-5IFJ3 49.5
GTEX-TKQ2-1826-SM-33HB2 49.4
GTEX-YJ8O-2226-SM-5IFHW 49.4
GTEX-ZT9W-2026-SM-51MRA 49.4
GTEX-PSDG-1626-SM-48TCQ 49.3
GTEX-11WQK-2426-SM-5GU5C 48.9
GTEX-ZZ64-1226-SM-5E43R 48.6
GTEX-11ZTT-2326-SM-5EQLG 48.5
GTEX-144GM-0926-SM-5O994 47.7
GTEX-14753-2426-SM-5LU8U 47.5
GTEX-14E6E-1326-SM-5S2NR 46.9
GTEX-TKQ1-0226-SM-33HB5 46.1
GTEX-12WSM-1726-SM-5BC6J 45.7
GTEX-UTHO-1026-SM-3GAF7 43.9
GTEX-13PVQ-1026-SM-5KM3M 43.2
GTEX-YEC3-1026-SM-5IFI5 43.1
GTEX-ZQUD-1926-SM-51MSA 41.9
GTEX-11TUW-1826-SM-5BC5D 38.9
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

155.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 155.9
FF:10080-102A8 77 years, female 155.9

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