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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:38.5RPKM
FANTOM5:177.6Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA041940

 

Antibody HPA043560

 

Antibody CAB004465

 

Glial cells

Medium   Medium   Low  

Neuronal cells

Medium   Medium   High  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

38.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 38.5
Samples: 117

Max RPKM: 61.3
Min RPKM: 15.8
Std RPKM: 9
Median RPKM: 38.8
GTEX-X4XX-0011-R5A-SM-46MWN 61.3
GTEX-13X6K-0011-R5b-SM-5PNUE 58.7
GTEX-13NYB-0011-R5a-SM-5MR45 56.6
GTEX-12WSA-0011-R5b-SM-5GU5I 56.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 55.5
GTEX-13NYS-0011-R5a-SM-5MR4D 54.6
GTEX-X585-0011-R5A-SM-46MVI 54.5
GTEX-WWYW-0011-R5A-SM-3NB3E 52.3
GTEX-132Q8-0011-R5a-SM-5IJDM 51.8
GTEX-N7MS-0011-R5a-SM-2HMK8 51.7
GTEX-TSE9-0011-R5A-SM-3DB7J 50.9
GTEX-XMD1-0011-R5A-SM-4AT47 50.6
GTEX-13OVH-0011-R5b-SM-5KM4L 49.8
GTEX-OHPN-0011-R5A-SM-2I5FF 49.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 49.5
GTEX-13FLV-0011-R5a-SM-5LZWT 49.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 49.4
GTEX-RVPV-0011-R5A-SM-2TF69 47.9
GTEX-13JUV-0011-R5a-SM-5LZY5 47.7
GTEX-WL46-0011-R5A-SM-3LK6V 47.3
GTEX-13FXS-0011-R5b-SM-5LZYE 46.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 46.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 46.4
GTEX-R55E-0011-R5A-SM-2TC5N 46.2
GTEX-QMR6-0011-R5A-SM-32PKT 45.4
GTEX-13SLX-0011-R5a-SM-5O9BV 45.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 44.8
GTEX-QVJO-0011-R5A-SM-2S1QM 44.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 44.1
GTEX-13JVG-0011-R5a-SM-5MR4O 44.0
GTEX-11NV4-0011-R5a-SM-5NQ88 43.9
GTEX-13O3O-0011-R5b-SM-5KM44 43.7
GTEX-11H98-0011-R5b-SM-57WCF 43.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 43.0
GTEX-13FLW-0011-R5a-SM-5LZX6 43.0
GTEX-13X6I-0011-R5a-SM-5PNWW 42.6
GTEX-14BIM-0011-R5b-SM-5S2RM 42.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 42.4
GTEX-N7MT-0011-R5a-SM-2I3G6 42.3
GTEX-11GSP-0011-R5a-SM-57WBE 42.2
GTEX-XOTO-0011-R5A-SM-4B657 42.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 41.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 41.8
GTEX-13G51-0011-R5a-SM-5L3EB 41.4
GTEX-13OW5-0011-R5b-SM-5L3FR 41.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 41.1
GTEX-145LS-0011-R5a-SM-5SI65 41.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 41.0
GTEX-139T8-0011-R5b-SM-5J1MO 40.9
GTEX-145MH-0011-R5a-SM-5P9JT 40.2
GTEX-RU72-0011-R5A-SM-2TF6U 40.0
GTEX-13OW7-0011-R5b-SM-5O9DM 39.9
GTEX-NL4W-0011-R5a-SM-2I3GD 39.9
GTEX-131YS-0011-R5b-SM-5K7YB 39.8
GTEX-ZUA1-0011-R5b-SM-51MTG 39.8
GTEX-T6MN-0011-R5A-SM-32QPD 39.4
GTEX-13OW6-0011-R5a-SM-5O9BK 39.3
GTEX-13S7M-0011-R5b-SM-5P9HS 39.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 38.8
GTEX-12WSF-0011-R5a-SM-5HL8K 38.7
GTEX-1399T-0011-R5b-SM-5IJDK 38.7
GTEX-WZTO-0011-R5B-SM-3NMC5 38.3
GTEX-13VXU-0011-R5a-SM-5O9D7 38.1
GTEX-NL3H-0011-R5a-SM-2I3GB 38.1
GTEX-YFC4-0011-R5a-SM-4RGLR 37.8
GTEX-UTHO-0011-R5A-SM-3GIJD 37.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 36.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 36.3
GTEX-ZE7O-0011-R5a-SM-57WBO 36.0
GTEX-12WSC-0011-R5b-SM-5CVNS 35.6
GTEX-13OVL-0011-R5b-SM-5L3FU 35.4
GTEX-ZXG5-0011-R5b-SM-57WBN 35.4
GTEX-Z93S-0011-R5b-SM-4RGNI 35.3
GTEX-WVLH-0011-R5A-SM-3MJFW 35.1
GTEX-144GO-0011-R5a-SM-5PNUR 34.9
GTEX-1313W-0011-R5b-SM-5L3EP 34.7
GTEX-139TT-0011-R5b-SM-5K7W8 34.4
GTEX-12WSD-0011-R5b-SM-5CVNG 34.3
GTEX-T5JC-0011-R5A-SM-32PLK 34.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 33.8
GTEX-13CZV-0011-R5a-SM-5K7XA 33.7
GTEX-X261-0011-R5A-SM-3NMB4 33.4
GTEX-14ABY-0011-R5b-SM-5SI7B 33.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 33.0
GTEX-139TS-0011-R5b-SM-5J2MZ 32.7
GTEX-144GL-0011-R5b-SM-5PNUJ 32.6
GTEX-14BIN-0011-R5b-SM-5SI78 32.3
GTEX-11OF3-0011-R5a-SM-57WB4 32.1
GTEX-13FHP-0011-R5b-SM-5LZY2 32.1
GTEX-12WSB-0011-R5b-SM-5GU67 31.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 31.3
GTEX-12ZZX-0011-R5a-SM-5HL89 31.1
GTEX-RVPU-0011-R5A-SM-2XCAD 30.9
GTEX-P44H-0011-R5A-SM-2XCEX 30.2
GTEX-PVOW-0011-R5A-SM-32PL7 30.2
GTEX-13X6J-0011-R5b-SM-5PNWT 30.1
GTEX-S7SE-0011-R5A-SM-2XCDA 29.3
GTEX-12WSH-0011-R5b-SM-5P9F3 29.0
GTEX-13CIG-0011-R5b-SM-5L3F2 28.8
GTEX-YJ89-0011-R5a-SM-4V6GM 28.8
GTEX-11WQC-0011-R5a-SM-5BC74 28.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 28.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 28.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 27.9
GTEX-ZVT3-0011-R5a-SM-51MSI 27.7
GTEX-11UD1-0011-R5b-SM-5P9FP 27.6
GTEX-1445S-0011-R5a-SM-5PNUS 27.6
GTEX-ZV68-0011-R5a-SM-4YCDW 27.5
GTEX-13CF2-0011-R5a-SM-5LZWS 26.9
GTEX-13112-0011-R5b-SM-5DUV8 26.3
GTEX-NPJ7-0011-R5a-SM-33HBK 26.3
GTEX-OXRN-0011-R5A-SM-2I5EF 25.2
GTEX-1477Z-0011-R5b-SM-5PNUO 20.8
GTEX-S7PM-0011-R5A-SM-3NM8G 18.8
GTEX-145MG-0011-R5b-SM-5S2VU 18.5
GTEX-13NZA-0011-R5b-SM-5KM4K 16.6
GTEX-T2IS-0011-R5A-SM-32QP4 15.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

177.6

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 177.6
FF:10379-105H1 89 years, female 178.8
FF:10164-103B2 76 years, female 176.5

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