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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:138.5TPM
GTEx:74.6RPKM
FANTOM5:222.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA041940

 

Antibody HPA043560

 

Antibody CAB004465

 

Glandular cells

High   High   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

138.5

overview Male, age 65
Sample 1
TPM: 149.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 131.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 144.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 129.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

74.6

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 74.6
Samples: 88

Max RPKM: 107.9
Min RPKM: 33.6
Std RPKM: 11.8
Median RPKM: 76.8
GTEX-Y5LM-1626-SM-4VDTB 107.9
GTEX-13D11-0726-SM-5LZZB 96.5
GTEX-111YS-1426-SM-5GID8 90.5
GTEX-14DAR-1426-SM-5RQIR 90.4
GTEX-WH7G-1626-SM-4LVMY 89.2
GTEX-1399S-2026-SM-5KM4B 88.3
GTEX-YEC4-1726-SM-4W21E 87.6
GTEX-ZYFG-2026-SM-5E43Y 87.5
GTEX-WRHK-1026-SM-4MVOD 87.3
GTEX-ZLFU-1526-SM-4WWBT 86.3
GTEX-ZYWO-1526-SM-5SIAL 86.1
GTEX-Y9LG-1626-SM-5IFHM 85.9
GTEX-11I78-1126-SM-5A5K5 85.6
GTEX-11NSD-1726-SM-5N9C3 85.1
GTEX-14E6E-1626-SM-5RQI7 84.8
GTEX-11P82-0826-SM-5P9GU 84.5
GTEX-ZTSS-0926-SM-59865 83.9
GTEX-YB5E-1526-SM-5IFIE 83.2
GTEX-13113-1226-SM-5EGHT 82.5
GTEX-11EQ9-1326-SM-5985X 82.4
GTEX-11P7K-1626-SM-5GU63 81.7
GTEX-ZTPG-2626-SM-57WFX 81.6
GTEX-ZXES-1526-SM-5NQ95 81.4
GTEX-YF7O-1826-SM-5IFIU 81.2
GTEX-13FH7-1226-SM-5IJFK 80.8
GTEX-131XG-1726-SM-5LZUR 80.8
GTEX-13O61-1326-SM-5KM31 80.7
GTEX-ZC5H-2326-SM-4WAYT 80.6
GTEX-ZA64-1226-SM-5HL7B 80.5
GTEX-11DXX-1626-SM-5H11H 80.2
GTEX-ZZ64-0526-SM-5GZXM 80.0
GTEX-13RTK-0826-SM-5Q5C6 79.9
GTEX-11XUK-1426-SM-5EQMG 79.5
GTEX-X5EB-1626-SM-4E3IV 79.2
GTEX-ZLV1-1126-SM-4WWBW 79.0
GTEX-139T6-1026-SM-5IJGC 78.5
GTEX-XBED-1426-SM-4AT4G 78.3
GTEX-13PL7-2626-SM-5IFH4 78.2
GTEX-148VJ-2226-SM-5NQ9M 78.2
GTEX-ZTX8-0526-SM-59HLD 77.9
GTEX-13FTW-2026-SM-5IJE2 77.7
GTEX-131XF-1326-SM-5GCMQ 77.6
GTEX-ZVZP-1826-SM-5GZXB 77.0
GTEX-1122O-1326-SM-5H11F 76.8
GTEX-145LT-1026-SM-5LU9O 76.7
GTEX-WFG8-1626-SM-4LVMB 76.3
GTEX-WFJO-0926-SM-4LVM2 76.1
GTEX-VUSG-1726-SM-4KKZL 75.4
GTEX-145ME-0926-SM-5O9AR 75.0
GTEX-11DXZ-1326-SM-5H11X 74.7
GTEX-12BJ1-1926-SM-5HL9Z 74.6
GTEX-139YR-2226-SM-5IFFW 74.3
GTEX-XGQ4-1326-SM-4GIDU 74.2
GTEX-VJYA-0926-SM-4KL1N 74.0
GTEX-ZPCL-1726-SM-57WEO 73.9
GTEX-ZEX8-1826-SM-57WBH 73.2
GTEX-ZP4G-1626-SM-57WGD 73.0
GTEX-11VI4-1626-SM-5EQKO 73.0
GTEX-ZVT2-2126-SM-5NQ93 72.5
GTEX-1399R-2026-SM-5K7WN 71.9
GTEX-ZVP2-1726-SM-5GU5P 71.7
GTEX-X15G-1426-SM-4PQZK 71.2
GTEX-13CF3-1226-SM-5LZXN 71.1
GTEX-XUZC-1426-SM-4BRV3 70.9
GTEX-13QBU-1926-SM-5IJEW 70.8
GTEX-1399U-2126-SM-5IFEZ 70.4
GTEX-Z9EW-0926-SM-5CVMM 69.6
GTEX-WQUQ-2426-SM-4MVNW 69.6
GTEX-UPK5-2026-SM-4JBIM 68.4
GTEX-133LE-1426-SM-5IFH1 68.0
GTEX-1192X-2526-SM-59868 67.8
GTEX-XAJ8-0526-SM-47JYK 67.0
GTEX-Y114-1426-SM-4TT6W 66.9
GTEX-XXEK-1026-SM-4BRUW 65.7
GTEX-WFG7-1726-SM-4LVME 63.7
GTEX-ZPIC-2326-SM-57WDW 62.4
GTEX-ZQG8-2526-SM-57WEQ 60.6
GTEX-13O21-1026-SM-5IJDU 58.3
GTEX-XMK1-1826-SM-4B66F 56.8
GTEX-117YX-0326-SM-5GICL 55.4
GTEX-ZF2S-1726-SM-57WFT 55.0
GTEX-13111-1426-SM-5DUW3 54.3
GTEX-Y3IK-1726-SM-4YCCR 52.0
GTEX-12WSK-1526-SM-5CVNO 51.1
GTEX-WEY5-1526-SM-4LMJF 49.3
GTEX-111CU-1326-SM-5NQ8L 47.9
GTEX-13OVI-1926-SM-5IJCG 44.2
GTEX-ZQUD-0926-SM-57WE3 33.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

222.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 222.7
FF:10024-101D6 15,40,85 years, mixed 222.7

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The Human Protein Atlas project is funded
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