We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ARPC1B
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:29.7TPM
GTEx:30.3RPKM
FANTOM5:101.0Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA004832

 

Adipocytes

Not detected  

Glandular cells

Low  

Myoepithelial cells

Not detected  
 
 
 

BREAST - HPA RNA-seq

Average TPM

29.7

overview Female, age 52
Sample 1
TPM: 47.3
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 44.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 20.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 6.5
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

30.3

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 30.3
Samples: 214

Max RPKM: 77.8
Min RPKM: 12.1
Std RPKM: 9.8
Median RPKM: 28.8
GTEX-13S86-1226-SM-5S2OA 77.8
GTEX-11DZ1-0326-SM-5N9BN 60.2
GTEX-13NZ9-1026-SM-5MR5K 58.0
GTEX-13O3Q-2226-SM-5KM4O 57.7
GTEX-11GSO-1926-SM-5A5K3 53.7
GTEX-Y5V6-2126-SM-4WWFX 52.0
GTEX-XYKS-1326-SM-4BRUN 49.5
GTEX-11TT1-2126-SM-5GU5Y 48.3
GTEX-11O72-2126-SM-5N9FO 48.2
GTEX-145LT-0726-SM-5S2VM 48.0
GTEX-ZY6K-1626-SM-5GZWV 47.6
GTEX-132AR-0826-SM-5EGK6 47.4
GTEX-Y3I4-1526-SM-4TT7K 47.0
GTEX-139TU-0626-SM-5KM3X 46.7
GTEX-146FH-0826-SM-5SI8T 45.9
GTEX-ZWKS-2826-SM-5NQ74 45.9
GTEX-11EQ9-1826-SM-5Q5AJ 45.8
GTEX-YFCO-1826-SM-4W1YH 45.8
GTEX-11ONC-2126-SM-5HL6E 44.9
GTEX-13D11-1026-SM-5IJFB 44.6
GTEX-U8XE-0826-SM-4E3J1 44.3
GTEX-132NY-0826-SM-5K7Y7 44.2
GTEX-13O61-1826-SM-5KM4I 42.7
GTEX-Y8E4-1626-SM-5S2MW 42.4
GTEX-S32W-2026-SM-4AD6E 42.3
GTEX-ZDTT-2126-SM-5S2OJ 42.3
GTEX-ZTTD-1026-SM-51MRD 42.3
GTEX-X4XY-0926-SM-4E3JD 42.0
GTEX-XQ8I-2426-SM-4WAXY 41.6
GTEX-11WQK-2426-SM-5GU5C 40.8
GTEX-12WSN-1326-SM-5GCNT 40.2
GTEX-Y114-2026-SM-4TT7L 39.5
GTEX-WOFL-0826-SM-3MJG1 39.3
GTEX-S4Q7-1126-SM-4AD6R 39.2
GTEX-14E6E-1326-SM-5S2NR 39.0
GTEX-VUSG-2226-SM-4KKZO 39.0
GTEX-ZVZQ-0826-SM-51MRF 39.0
GTEX-WY7C-2726-SM-3NB3P 38.9
GTEX-ZYW4-0826-SM-5GIDG 38.6
GTEX-ZT9W-2026-SM-51MRA 38.3
GTEX-S7SE-0826-SM-4AT4D 38.2
GTEX-ZEX8-2226-SM-57WC6 38.1
GTEX-RUSQ-2026-SM-4GIAK 38.0
GTEX-TKQ1-0226-SM-33HB5 37.8
GTEX-117YX-1426-SM-5H12H 37.3
GTEX-11OF3-1926-SM-59889 37.2
GTEX-WFON-1826-SM-3GILG 37.2
GTEX-11LCK-2426-SM-5HL5F 37.1
GTEX-11NSD-0926-SM-5N9DR 37.0
GTEX-ZLV1-1426-SM-4WWES 36.7
GTEX-ZLFU-2126-SM-4WWEV 36.6
GTEX-R55D-0826-SM-48FEA 36.5
GTEX-XV7Q-2326-SM-4BRVZ 36.5
GTEX-1117F-2826-SM-5GZXL 36.4
GTEX-S33H-0326-SM-4AD6N 36.3
GTEX-ZA64-1526-SM-5CVMD 35.9
GTEX-13O3O-0826-SM-5K7WE 35.8
GTEX-12BJ1-1826-SM-5HL9N 35.7
GTEX-12WSB-0626-SM-59HJO 35.7
GTEX-ZV6S-1826-SM-5NQ8D 35.3
GTEX-11WQC-1726-SM-5GU4W 34.9
GTEX-QMRM-1626-SM-4R1KV 34.9
GTEX-12WSM-1726-SM-5BC6J 34.8
GTEX-145MN-1926-SM-5SIAI 34.8
GTEX-QVJO-1826-SM-447C9 34.6
GTEX-11EI6-0626-SM-5985T 34.5
GTEX-WI4N-1426-SM-3LK7H 34.4
GTEX-11NV4-2026-SM-5N9DG 34.2
GTEX-ZYFC-0826-SM-5E44K 33.8
GTEX-14AS3-1626-SM-5S2OY 33.6
GTEX-11ZUS-0826-SM-5FQUY 33.5
GTEX-1122O-1226-SM-5H113 33.4
GTEX-13QIC-2326-SM-5LU5N 33.3
GTEX-YJ8O-2226-SM-5IFHW 33.3
GTEX-X261-0626-SM-3NMD9 33.0
GTEX-ZYWO-2326-SM-5GZY4 32.8
GTEX-ZZPU-0626-SM-5E43T 32.6
GTEX-139T6-1626-SM-5PNYZ 32.5
GTEX-YB5E-1726-SM-5IFJ3 32.5
GTEX-13FTW-1426-SM-5LZWZ 32.2
GTEX-X15G-1626-SM-3NMB3 32.0
GTEX-ZTX8-1226-SM-4YCE9 32.0
GTEX-XBED-1626-SM-47JYN 31.9
GTEX-SE5C-2126-SM-4BRUJ 31.8
GTEX-1192X-2326-SM-5987X 31.6
GTEX-13NZ8-0126-SM-5IJCT 31.4
GTEX-11ZTT-2326-SM-5EQLG 31.3
GTEX-YEC3-1026-SM-5IFI5 31.3
GTEX-1211K-1926-SM-5EQLB 31.1
GTEX-13FHO-0826-SM-5L3E8 31.1
GTEX-13O3P-0826-SM-5L3DH 31.0
GTEX-SIU7-1626-SM-4BRUK 30.9
GTEX-XUW1-2326-SM-4BOO5 30.9
GTEX-ZVT2-1826-SM-5NQ8W 30.9
GTEX-Y111-2026-SM-4SOJA 30.4
GTEX-ZUA1-1526-SM-59HLS 30.4
GTEX-13NZB-2126-SM-5MR4Y 30.3
GTEX-XGQ4-0926-SM-4AT4U 30.1
GTEX-13W3W-1226-SM-5LU4H 29.8
GTEX-13W46-0826-SM-5LU3H 29.7
GTEX-144GM-0926-SM-5O994 29.7
GTEX-13FTX-1126-SM-5N9EN 29.6
GTEX-ZV7C-1826-SM-5NQ83 29.4
GTEX-UPK5-2326-SM-3P5Z8 29.2
GTEX-14ABY-2126-SM-5QGQZ 29.0
GTEX-ZAB4-2526-SM-5HL8M 28.9
GTEX-13CF3-2126-SM-5IFJP 28.8
GTEX-REY6-2426-SM-48FF5 28.7
GTEX-UJHI-1426-SM-3DB9C 28.7
GTEX-ZDYS-1126-SM-5K7UB 28.4
GTEX-11I78-2226-SM-5PNYA 28.1
GTEX-ZVT4-1026-SM-57WC4 28.1
GTEX-QEG5-0726-SM-4R1JQ 28.0
GTEX-S341-1526-SM-4AD6K 27.9
GTEX-11DXW-0626-SM-5N9ER 27.8
GTEX-13OW8-0226-SM-5K7UP 27.8
GTEX-TML8-1226-SM-32QON 27.8
GTEX-1399U-1826-SM-5PNZ1 27.7
GTEX-X4EP-2926-SM-3P5YQ 27.6
GTEX-TKQ2-1826-SM-33HB2 27.4
GTEX-XQ3S-1326-SM-4BOPQ 27.4
GTEX-1314G-1226-SM-5BC6D 27.2
GTEX-U3ZN-1926-SM-4DXSG 27.0
GTEX-ZQG8-0726-SM-5P9H9 27.0
GTEX-ZDXO-0126-SM-5S2ND 26.9
GTEX-XUZC-1626-SM-4BRVP 26.7
GTEX-ZF3C-2326-SM-5S2MZ 26.7
GTEX-ZYT6-0126-SM-5E45J 26.7
GTEX-1313W-0826-SM-5EQ4T 26.5
GTEX-ZZ64-1226-SM-5E43R 26.5
GTEX-Q2AG-0326-SM-48U1O 26.4
GTEX-133LE-1726-SM-5K7VQ 26.1
GTEX-RWS6-1926-SM-47JXY 25.9
GTEX-XUJ4-1926-SM-4BOOV 25.9
GTEX-T5JW-2026-SM-4DM63 25.8
GTEX-ZAJG-0626-SM-5HL8X 25.8
GTEX-13113-1726-SM-5GCOO 25.7
GTEX-14753-2426-SM-5LU8U 25.7
GTEX-Y9LG-1426-SM-5IFJZ 25.7
GTEX-13OW5-2226-SM-5L3HC 25.6
GTEX-WXYG-2226-SM-4E3IM 25.6
GTEX-144GL-2026-SM-5LU3O 25.2
GTEX-13N11-1726-SM-5J1OJ 25.1
GTEX-S4P3-1326-SM-4AD6V 25.1
GTEX-XMD1-0826-SM-4AT52 25.0
GTEX-PSDG-1626-SM-48TCQ 24.9
GTEX-Y8LW-1626-SM-5IFHX 24.9
GTEX-117XS-1926-SM-5GICO 24.7
GTEX-11DXY-2326-SM-5GICW 24.5
GTEX-XMD2-0926-SM-4WWEF 24.4
GTEX-1269C-2426-SM-5FQSN 24.3
GTEX-12WSK-2226-SM-5GCO5 24.3
GTEX-145MO-0826-SM-5NQBL 24.2
GTEX-T2YK-2226-SM-32QPT 24.1
GTEX-Y5V5-2126-SM-4WWFO 23.9
GTEX-11P81-1926-SM-5BC53 23.8
GTEX-11PRG-0826-SM-5EQ6A 23.8
GTEX-13N1W-0626-SM-5MR4U 23.6
GTEX-WRHU-0326-SM-3MJFY 23.5
GTEX-11P7K-0726-SM-5EGKX 23.4
GTEX-QEL4-2126-SM-447AE 23.3
GTEX-R53T-1526-SM-48FEK 22.9
GTEX-ZU9S-1926-SM-5NQBP 22.9
GTEX-WYJK-1326-SM-3NB2T 22.7
GTEX-145ME-1526-SM-5Q5F2 22.6
GTEX-WYBS-0926-SM-3NM94 22.4
GTEX-ZF29-1926-SM-5S2P1 22.3
GTEX-111YS-1926-SM-5GICC 22.2
GTEX-ZC5H-2626-SM-5J2MG 21.7
GTEX-13PVQ-1026-SM-5KM3M 21.5
GTEX-T2IS-1526-SM-32QPR 21.5
GTEX-UTHO-1026-SM-3GAF7 21.5
GTEX-Y3IK-2326-SM-4WWDT 21.5
GTEX-U3ZH-1426-SM-4DXSR 21.4
GTEX-ZF2S-2026-SM-5E461 21.3
GTEX-11TUW-1826-SM-5BC5D 21.2
GTEX-S4UY-0726-SM-4AD6X 21.2
GTEX-ZQUD-1926-SM-51MSA 21.1
GTEX-11EMC-2026-SM-5A5JV 20.8
GTEX-147F4-2826-SM-5NQBN 20.8
GTEX-RU72-0626-SM-46MUI 20.8
GTEX-ZPIC-1126-SM-5BC7F 20.8
GTEX-Y5LM-1726-SM-4VDSX 20.7
GTEX-T6MO-0326-SM-32QOK 20.1
GTEX-13CF2-2026-SM-5K7VI 20.0
GTEX-XMK1-1126-SM-4IHJ8 19.9
GTEX-11GS4-2126-SM-5A5KR 19.7
GTEX-11P82-1326-SM-5HL62 19.7
GTEX-12KS4-0126-SM-5Q5A5 19.4
GTEX-R3RS-0626-SM-48FE1 19.2
GTEX-U412-1826-SM-4DXTJ 19.1
GTEX-YFC4-1426-SM-5IFJG 19.1
GTEX-13PL6-2926-SM-5L3I2 18.9
GTEX-ZVE2-1226-SM-5NQ8R 18.7
GTEX-11DXZ-1926-SM-5GZZL 18.6
GTEX-TMMY-0726-SM-33HBE 18.1
GTEX-11EM3-1326-SM-5N9C6 18.0
GTEX-QDT8-0626-SM-48TYW 17.9
GTEX-YB5K-1626-SM-5IFIN 17.9
GTEX-T6MN-0726-SM-32PML 17.8
GTEX-XOT4-0726-SM-4GIAW 17.6
GTEX-VJWN-0726-SM-3GIJ8 17.1
GTEX-131YS-0626-SM-5EGKL 16.7
GTEX-13FTY-2226-SM-5J1ND 16.7
GTEX-W5X1-2326-SM-3GIL6 16.4
GTEX-R55F-1726-SM-2TF4R 16.3
GTEX-ZVTK-0326-SM-51MRR 16.3
GTEX-T5JC-2126-SM-32PMO 15.8
GTEX-139T8-0826-SM-5L3DE 15.7
GTEX-ZXES-0826-SM-5E43C 15.5
GTEX-132Q8-1426-SM-5EGK7 15.2
GTEX-WYVS-1726-SM-3NMAY 14.7
GTEX-12ZZX-1126-SM-5EGKB 14.3
GTEX-131XW-0726-SM-5EGK3 12.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

101.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 101.0
FF:10080-102A8 77 years, female 101.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.