We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ARPC1B
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:16.8TPM
GTEx:14.4RPKM
FANTOM5:102.2Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA004832

 

Bile duct cells

Not detected  

Hepatocytes

Not detected  
 
 
 

LIVER - HPA RNA-seq

Average TPM

16.8

N/A Female, age 60
Sample 1
TPM: 25.6
overview Male, age 54
Sample 2
TPM: 28.1
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 23.2
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 4.2
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 6.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 12.6
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 14.1
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 23.5
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 10.6
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 19.3
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

14.4

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 14.4
Samples: 119

Max RPKM: 52.4
Min RPKM: 4.3
Std RPKM: 9
Median RPKM: 11.6
GTEX-13N11-0926-SM-5IJG2 52.4
GTEX-1497J-0726-SM-5Q5D1 49.0
GTEX-14C38-1526-SM-5RQJ7 42.3
GTEX-YB5E-0326-SM-5IFHU 40.2
GTEX-QEL4-1226-SM-447A4 33.8
GTEX-QDVN-0826-SM-48TZ2 32.1
GTEX-S32W-1926-SM-4AD63 30.2
GTEX-REY6-1226-SM-48FDR 29.0
GTEX-139YR-0226-SM-5IFEM 28.4
GTEX-13FTW-1126-SM-5J2NV 27.0
GTEX-ZVP2-0626-SM-51MSO 26.4
GTEX-131XE-0326-SM-5LZVO 26.1
GTEX-X4EP-1026-SM-4QAS5 25.5
GTEX-13NZ9-1326-SM-5MR3V 24.9
GTEX-Q734-0326-SM-48U15 24.9
GTEX-12WSG-0626-SM-5FQTQ 24.6
GTEX-Y5LM-0426-SM-4VBRO 24.2
GTEX-S33H-1626-SM-4AD68 24.1
GTEX-ZYY3-0626-SM-5NQ6W 23.7
GTEX-ZTPG-1426-SM-51MT3 23.1
GTEX-X4XY-1626-SM-46MVN 22.2
GTEX-11EQ9-0526-SM-5A5JZ 21.9
GTEX-144GM-1326-SM-5LU5E 21.4
GTEX-X261-1726-SM-4PQYT 20.6
GTEX-WYVS-1926-SM-4PQZ2 20.1
GTEX-WFON-1726-SM-4LVMQ 19.3
GTEX-ZAB4-0826-SM-5LU9D 19.2
GTEX-UTHO-2426-SM-4JBHD 18.8
GTEX-UPK5-1426-SM-4JBHH 18.6
GTEX-12KS4-1326-SM-5LUB3 18.5
GTEX-TKQ2-1726-SM-4DXUP 18.2
GTEX-13113-1326-SM-5GCOI 17.9
GTEX-UPIC-0926-SM-4IHLV 17.5
GTEX-12WSL-0226-SM-5CVMJ 16.6
GTEX-P78B-1326-SM-3P611 16.4
GTEX-RM2N-1926-SM-48FCU 16.2
GTEX-VUSG-0126-SM-4KL1X 16.2
GTEX-13QJC-0726-SM-5RQJK 15.9
GTEX-12WSI-0226-SM-5GCNA 15.2
GTEX-RTLS-1326-SM-46MUN 15.2
GTEX-146FH-1526-SM-5NQBU 14.5
GTEX-ZF29-2026-SM-4WWB7 14.1
GTEX-WQUQ-1926-SM-4OOSA 13.7
GTEX-145MO-2326-SM-5NQ9K 13.6
GTEX-PX3G-0826-SM-48TZS 13.4
GTEX-Q2AG-1126-SM-48U1P 13.3
GTEX-13NZB-0626-SM-5IFH6 13.2
GTEX-13O3O-1826-SM-5IFGW 13.2
GTEX-S4Z8-0526-SM-4AD4T 13.1
GTEX-YEC4-0826-SM-5P9FV 13.1
GTEX-13N2G-0926-SM-5IFGJ 12.9
GTEX-ZAB5-0426-SM-5CVMI 12.8
GTEX-ZZPU-0426-SM-5GZYH 12.8
GTEX-12696-0826-SM-5EGGE 12.4
GTEX-139TS-1426-SM-5IFJD 12.2
GTEX-OOBJ-0826-SM-3NB2K 12.2
GTEX-YFC4-1526-SM-5IFJS 12.2
GTEX-ZPU1-0826-SM-57WG2 12.1
GTEX-ZF2S-3026-SM-4WWCH 11.8
GTEX-132NY-0926-SM-5P9G3 11.6
GTEX-Z9EW-0426-SM-5CVM9 11.6
GTEX-QV44-0326-SM-4R1KD 11.5
GTEX-13SLX-1226-SM-5S2Q6 11.4
GTEX-11DXZ-0126-SM-5EGGY 11.2
GTEX-11WQC-0726-SM-5EQMR 10.8
GTEX-14AS3-0126-SM-5Q5F4 10.8
GTEX-XBEC-1526-SM-4AT68 10.8
GTEX-13NYB-1026-SM-5IFH3 10.7
GTEX-14A5I-1726-SM-5QGQ5 10.7
GTEX-R53T-0326-SM-48FEC 10.5
GTEX-13FLV-0326-SM-5N9DJ 10.4
GTEX-13PVR-0126-SM-5S2PY 10.4
GTEX-1399T-0826-SM-5IFES 10.2
GTEX-RU72-1426-SM-46MUF 10.1
GTEX-147F4-1426-SM-5LUA8 9.8
GTEX-ZVT4-0626-SM-5E45T 9.8
GTEX-11ZTS-1426-SM-5EQMM 9.7
GTEX-12WSD-1426-SM-5GCN9 9.6
GTEX-X3Y1-2726-SM-4PQZH 9.6
GTEX-13OW6-2626-SM-5IFF2 9.4
GTEX-ZVT3-1626-SM-5GU66 9.4
GTEX-1212Z-0226-SM-59HLF 9.2
GTEX-14E1K-0326-SM-5S2PE 9.2
GTEX-RWSA-1426-SM-47JXA 9.2
GTEX-X4EO-1126-SM-4QARQ 9.2
GTEX-1269C-0626-SM-5FQSS 9.1
GTEX-1399R-1226-SM-5P9GF 9.0
GTEX-Y5V5-0926-SM-4VBPZ 8.7
GTEX-XOTO-0826-SM-4B65O 8.2
GTEX-U3ZN-0226-SM-3DB8D 8.0
GTEX-131XH-0626-SM-5LZWH 7.7
GTEX-139TU-0826-SM-5IJFG 7.6
GTEX-145MF-0826-SM-5QGQA 7.5
GTEX-YECK-1926-SM-4W21H 7.5
GTEX-14DAQ-1726-SM-5S2R2 7.0
GTEX-RN64-1826-SM-48FDV 6.9
GTEX-11NV4-1326-SM-5HL6V 6.8
GTEX-12WSM-0726-SM-5GCOW 6.8
GTEX-11GSP-0626-SM-5986T 6.7
GTEX-13FTZ-0726-SM-5IFFY 6.7
GTEX-SJXC-1226-SM-4DM78 6.6
GTEX-T6MN-1226-SM-3NMA5 6.6
GTEX-147JS-1126-SM-5RQIW 6.4
GTEX-QEG4-1826-SM-4R1JN 6.3
GTEX-11NUK-1226-SM-5P9GM 6.2
GTEX-11DXY-0526-SM-5EGGQ 6.1
GTEX-11OF3-0726-SM-5BC4Z 5.9
GTEX-11ZVC-0726-SM-5FQT9 5.8
GTEX-14753-1626-SM-5NQ9L 5.8
GTEX-145LU-1326-SM-5LU9N 5.7
GTEX-13VXU-0926-SM-5IFFH 5.6
GTEX-13112-1426-SM-5EGH8 5.4
GTEX-QESD-2026-SM-447BI 5.4
GTEX-131YS-1626-SM-5HL6C 5.3
GTEX-11ZUS-2526-SM-59872 5.0
GTEX-WZTO-0626-SM-4PQYY 5.0
GTEX-ZYT6-0626-SM-5E45V 5.0
GTEX-RNOR-1426-SM-48FDJ 4.4
GTEX-12ZZZ-1326-SM-59HKW 4.3
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

102.2

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 102.2
FF:10018-101C9 64,69,70 years, mixed 102.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.