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ATPIF1
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:41.5RPKM
FANTOM5:710.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA027999

 

Glial cells

Not detected  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

41.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 41.5
Samples: 117

Max RPKM: 72.4
Min RPKM: 10
Std RPKM: 13.9
Median RPKM: 42.5
GTEX-139TT-0011-R5b-SM-5K7W8 72.4
GTEX-12WSC-0011-R5b-SM-5CVNS 69.9
GTEX-ZUA1-0011-R5b-SM-51MTG 68.9
GTEX-1399T-0011-R5b-SM-5IJDK 67.9
GTEX-13X6K-0011-R5b-SM-5PNUE 67.6
GTEX-12WSF-0011-R5a-SM-5HL8K 66.3
GTEX-T6MN-0011-R5A-SM-32QPD 63.0
GTEX-14BIM-0011-R5b-SM-5S2RM 62.6
GTEX-X585-0011-R5A-SM-46MVI 62.2
GTEX-13G51-0011-R5a-SM-5L3EB 62.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 61.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 59.2
GTEX-11OF3-0011-R5a-SM-57WB4 58.5
GTEX-131YS-0011-R5b-SM-5K7YB 58.0
GTEX-132Q8-0011-R5a-SM-5IJDM 56.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 56.3
GTEX-TSE9-0011-R5A-SM-3DB7J 56.2
GTEX-14ABY-0011-R5b-SM-5SI7B 56.0
GTEX-1313W-0011-R5b-SM-5L3EP 55.8
GTEX-13FLW-0011-R5a-SM-5LZX6 55.7
GTEX-N7MS-0011-R5a-SM-2HMK8 54.5
GTEX-T5JC-0011-R5A-SM-32PLK 54.4
GTEX-QVJO-0011-R5A-SM-2S1QM 54.2
GTEX-WVLH-0011-R5A-SM-3MJFW 54.2
GTEX-145MH-0011-R5a-SM-5P9JT 53.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 52.9
GTEX-13VXU-0011-R5a-SM-5O9D7 52.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 51.3
GTEX-T2IS-0011-R5A-SM-32QP4 50.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 50.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50.1
GTEX-WWYW-0011-R5A-SM-3NB3E 49.9
GTEX-Z93S-0011-R5b-SM-4RGNI 49.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 48.6
GTEX-11NV4-0011-R5a-SM-5NQ88 48.5
GTEX-13O3O-0011-R5b-SM-5KM44 48.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 48.3
GTEX-WL46-0011-R5A-SM-3LK6V 48.1
GTEX-13JUV-0011-R5a-SM-5LZY5 48.0
GTEX-RU72-0011-R5A-SM-2TF6U 47.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 47.5
GTEX-145LS-0011-R5a-SM-5SI65 46.8
GTEX-S7SE-0011-R5A-SM-2XCDA 46.8
GTEX-13NYS-0011-R5a-SM-5MR4D 46.7
GTEX-13CZV-0011-R5a-SM-5K7XA 46.5
GTEX-WZTO-0011-R5B-SM-3NMC5 46.1
GTEX-N7MT-0011-R5a-SM-2I3G6 45.7
GTEX-11GSP-0011-R5a-SM-57WBE 45.2
GTEX-R55E-0011-R5A-SM-2TC5N 44.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 44.1
GTEX-13OVL-0011-R5b-SM-5L3FU 44.1
GTEX-13FLV-0011-R5a-SM-5LZWT 44.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 43.7
GTEX-UTHO-0011-R5A-SM-3GIJD 43.5
GTEX-11H98-0011-R5b-SM-57WCF 43.4
GTEX-13FXS-0011-R5b-SM-5LZYE 42.7
GTEX-12WSA-0011-R5b-SM-5GU5I 42.5
GTEX-13OW7-0011-R5b-SM-5O9DM 42.5
GTEX-ZE7O-0011-R5a-SM-57WBO 42.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 42.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 41.7
GTEX-12WSB-0011-R5b-SM-5GU67 41.2
GTEX-XMD1-0011-R5A-SM-4AT47 41.1
GTEX-13S7M-0011-R5b-SM-5P9HS 40.8
GTEX-P44H-0011-R5A-SM-2XCEX 40.4
GTEX-RVPV-0011-R5A-SM-2TF69 39.9
GTEX-OHPN-0011-R5A-SM-2I5FF 39.3
GTEX-13OVH-0011-R5b-SM-5KM4L 39.1
GTEX-13NYB-0011-R5a-SM-5MR45 38.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 38.2
GTEX-ZXG5-0011-R5b-SM-57WBN 38.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 37.8
GTEX-13X6I-0011-R5a-SM-5PNWW 37.7
GTEX-PVOW-0011-R5A-SM-32PL7 37.6
GTEX-NL4W-0011-R5a-SM-2I3GD 37.5
GTEX-12WSD-0011-R5b-SM-5CVNG 36.9
GTEX-XOTO-0011-R5A-SM-4B657 36.7
GTEX-X4XX-0011-R5A-SM-46MWN 36.6
GTEX-13OW6-0011-R5a-SM-5O9BK 36.4
GTEX-YFC4-0011-R5a-SM-4RGLR 36.4
GTEX-12ZZX-0011-R5a-SM-5HL89 34.3
GTEX-13OW5-0011-R5b-SM-5L3FR 33.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 32.9
GTEX-QMR6-0011-R5A-SM-32PKT 32.7
GTEX-RVPU-0011-R5A-SM-2XCAD 32.5
GTEX-13CIG-0011-R5b-SM-5L3F2 32.1
GTEX-NL3H-0011-R5a-SM-2I3GB 31.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 31.3
GTEX-14BIN-0011-R5b-SM-5SI78 30.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 30.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 30.1
GTEX-139T8-0011-R5b-SM-5J1MO 29.0
GTEX-OXRN-0011-R5A-SM-2I5EF 28.9
GTEX-13JVG-0011-R5a-SM-5MR4O 28.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 28.3
GTEX-NPJ7-0011-R5a-SM-33HBK 27.5
GTEX-YJ89-0011-R5a-SM-4V6GM 27.3
GTEX-144GO-0011-R5a-SM-5PNUR 26.8
GTEX-ZV68-0011-R5a-SM-4YCDW 25.4
GTEX-11WQC-0011-R5a-SM-5BC74 25.2
GTEX-12WSH-0011-R5b-SM-5P9F3 24.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 23.3
GTEX-ZVT3-0011-R5a-SM-51MSI 23.3
GTEX-139TS-0011-R5b-SM-5J2MZ 22.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 22.1
GTEX-X261-0011-R5A-SM-3NMB4 21.7
GTEX-144GL-0011-R5b-SM-5PNUJ 20.4
GTEX-1445S-0011-R5a-SM-5PNUS 20.0
GTEX-13112-0011-R5b-SM-5DUV8 19.9
GTEX-13FHP-0011-R5b-SM-5LZY2 17.4
GTEX-11UD1-0011-R5b-SM-5P9FP 15.4
GTEX-S7PM-0011-R5A-SM-3NM8G 14.6
GTEX-13CF2-0011-R5a-SM-5LZWS 14.4
GTEX-1477Z-0011-R5b-SM-5PNUO 14.1
GTEX-13NZA-0011-R5b-SM-5KM4K 11.1
GTEX-145MG-0011-R5b-SM-5S2VU 10.0
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

710.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 710.0
FF:10379-105H1 89 years, female 842.0
FF:10164-103B2 76 years, female 577.9

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