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ATPIF1
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:247.0TPM
GTEx:46.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA027999

 

Endothelial cells

Low  

Glial cells

Low  

Neuronal cells

High  

Neuropil

Medium  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

247.0

N/A Male, age 5
Sample 1
TPM: 376.0
overview Female, age 40
Sample 2
TPM: 109.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 256.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

46.4

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 43.6
Samples: 114

Max RPKM: 58.9
Min RPKM: 23.7
Std RPKM: 7.7
Median RPKM: 44.2
GTEX-11OF3-2926-SM-5HL78 58.9
GTEX-145LS-3126-SM-5Q5BY 57.0
GTEX-X585-3026-SM-46MWF 56.5
GTEX-XLM4-3026-SM-4AT6L 56.5
GTEX-13SLX-3126-SM-5S2Q5 56.1
GTEX-11DXY-3226-SM-5GIDE 55.1
GTEX-ZYFD-3026-SM-5E44C 55.1
GTEX-13FHO-3026-SM-5J1O9 54.8
GTEX-ZAJG-3126-SM-5HL9J 54.7
GTEX-ZVT3-3026-SM-5E43N 54.2
GTEX-117XS-3026-SM-5N9CA 54.1
GTEX-11OC5-0726-SM-5P9JK 54.0
GTEX-13FLW-1426-SM-5K7YE 52.5
GTEX-13NYS-3126-SM-5KLYV 52.5
GTEX-Y8DK-0826-SM-4TT3T 52.3
GTEX-13OW8-2826-SM-5L3GC 51.8
GTEX-13O3O-3126-SM-5KM3H 51.7
GTEX-YJ89-3026-SM-5IFJI 51.1
GTEX-T5JC-2426-SM-3NMDB 51.0
GTEX-11GSO-2926-SM-5HL73 50.8
GTEX-13OVH-3026-SM-5MR4N 50.7
GTEX-13NYC-2826-SM-5K7WR 50.6
GTEX-1192X-3126-SM-5N9BY 50.5
GTEX-14BMV-3026-SM-5S2PQ 50.4
GTEX-12WSH-3026-SM-5CVNI 49.9
GTEX-12WSC-3026-SM-5GCNF 49.8
GTEX-131YS-3126-SM-5KLYT 49.8
GTEX-13VXU-2926-SM-5LU5C 49.8
GTEX-T6MN-2626-SM-32PMQ 49.7
GTEX-ZE7O-3126-SM-5HL5X 49.7
GTEX-11DXW-1126-SM-5H12Q 49.1
GTEX-145MG-3026-SM-5RQJA 49.1
GTEX-1399T-3026-SM-5KLZC 49.0
GTEX-WVLH-3026-SM-3MJG9 49.0
GTEX-11ONC-2926-SM-5P9JM 48.9
GTEX-11NUK-2926-SM-5A5MD 48.8
GTEX-XOTO-3026-SM-4B65M 48.6
GTEX-1313W-3126-SM-5LZUI 48.5
GTEX-YFC4-3126-SM-5PNV6 47.7
GTEX-QVJO-1426-SM-2S1QY 47.4
GTEX-WL46-2926-SM-3LK82 47.2
GTEX-12ZZY-3026-SM-5GCOU 47.0
GTEX-14ASI-3026-SM-5S2PN 46.6
GTEX-13O3Q-2926-SM-5KM45 46.5
GTEX-X4XX-3026-SM-3NMB2 46.4
GTEX-11ZUS-2926-SM-5FQSL 46.3
GTEX-ZUA1-3026-SM-59HJC 46.0
GTEX-132Q8-3026-SM-5PNVG 45.5
GTEX-13OW6-3026-SM-5J2MI 45.4
GTEX-11PRG-2926-SM-5987A 45.3
GTEX-12ZZW-2926-SM-5LZUP 45.2
GTEX-14A5I-2926-SM-5Q5CQ 45.1
GTEX-12ZZZ-3026-SM-5BC67 44.8
GTEX-WHSE-3026-SM-3P5ZH 44.5
GTEX-13S7M-3126-SM-5RQJQ 44.4
GTEX-13FXS-3126-SM-5J2NN 44.3
GTEX-144FL-3026-SM-5O99C 44.3
GTEX-QVUS-2826-SM-3GADB 44.2
GTEX-12ZZX-2926-SM-5GCOQ 44.0
GTEX-13QIC-2926-SM-5J2NF 44.0
GTEX-111FC-3126-SM-5GZZ2 43.7
GTEX-ZAK1-3026-SM-5S2MJ 43.7
GTEX-145MH-3026-SM-5Q5DZ 43.6
GTEX-13PL6-3126-SM-5LUAR 43.5
GTEX-11O72-2926-SM-5BC4V 43.3
GTEX-139T8-1026-SM-5J2MC 43.2
GTEX-11EI6-3026-SM-5GZZO 42.9
GTEX-R55F-1326-SM-5S2V4 42.8
GTEX-13OVJ-2826-SM-5L3GW 42.3
GTEX-13FHP-3026-SM-5IJBS 42.0
GTEX-WZTO-2926-SM-3NM9I 42.0
GTEX-Z93S-2926-SM-57WB9 41.8
GTEX-Q2AG-2926-SM-2HMJ3 41.5
GTEX-QDT8-2926-SM-32PKC 41.4
GTEX-13X6J-3026-SM-5Q5CU 40.9
GTEX-144GL-3026-SM-5Q5CW 40.9
GTEX-RU72-3026-SM-5SI7Y 40.9
GTEX-12126-1026-SM-5P9JJ 40.6
GTEX-13NYB-3026-SM-5IJD7 40.2
GTEX-NPJ8-1526-SM-2D7VU 40.2
GTEX-1117F-3226-SM-5N9CT 39.8
GTEX-Y111-2726-SM-4TT3N 39.8
GTEX-11EMC-3226-SM-5EGKW 39.5
GTEX-13X6K-2926-SM-5Q5D5 39.3
GTEX-RNOR-2326-SM-2TF4I 38.5
GTEX-1128S-2726-SM-5H12C 37.5
GTEX-145MF-2726-SM-5O995 37.5
GTEX-11GS4-3126-SM-5A5LH 37.3
GTEX-UTHO-3026-SM-3GAFB 37.0
GTEX-OXRN-2426-SM-2I5EQ 36.6
GTEX-13G51-3026-SM-5IJB8 36.5
GTEX-13JUV-2926-SM-5LZX7 36.3
GTEX-T2IS-3026-SM-32QPM 36.0
GTEX-PVOW-2526-SM-2XCF7 35.7
GTEX-N7MT-1126-SM-5SI7V 35.4
GTEX-131XW-3126-SM-5LZUC 35.3
GTEX-WWYW-3126-SM-3NB39 35.1
GTEX-13PVQ-3026-SM-5SI93 34.9
GTEX-13JVG-3126-SM-5L3FH 34.5
GTEX-NPJ7-2726-SM-2I3FT 34.4
GTEX-TSE9-3026-SM-3DB76 34.0
GTEX-12WSD-3126-SM-5HL7P 33.8
GTEX-13OW7-3026-SM-5L3GY 33.6
GTEX-QMR6-1426-SM-32PLA 33.5
GTEX-11NV4-2126-SM-5N9DS 32.2
GTEX-ZZPT-3026-SM-5GZXH 31.5
GTEX-11WQK-3026-SM-5EQL6 30.4
GTEX-147GR-3026-SM-5S2ML 30.2
GTEX-11TTK-2926-SM-5PNYP 29.1
GTEX-11GSP-3226-SM-5986O 27.2
GTEX-1445S-3026-SM-5O9BR 26.4
GTEX-13IVO-2926-SM-5L3CZ 26.3
GTEX-PWO3-0926-SM-2I5EY 25.1
GTEX-12WSA-2926-SM-5EQ4D 23.7
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 49.3
Samples: 108

Max RPKM: 82.5
Min RPKM: 21.3
Std RPKM: 12.3
Median RPKM: 50
GTEX-12ZZY-0011-R10b-SM-5HL7W 82.5
GTEX-13SLX-0011-R10a-SM-5P9HV 80.9
GTEX-13NYS-0011-R10a-SM-5MR4S 75.4
GTEX-13O3O-0011-R10a-SM-5LUA9 71.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 68.5
GTEX-12WSF-0011-R10a-SM-5LZVH 68.0
GTEX-1313W-0011-R10b-SM-5DUXA 67.9
GTEX-12WSC-0011-R10a-SM-5GU57 67.7
GTEX-14BIN-0011-R10a-SM-5S2UA 66.0
GTEX-13OW7-0011-R10a-SM-5L3H3 65.7
GTEX-13O3Q-0011-R10b-SM-5KM39 64.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 63.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 62.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 61.6
GTEX-XLM4-0011-R10A-SM-4AT5P 61.2
GTEX-13CZV-0011-R10b-SM-5LZYD 60.9
GTEX-147GR-0011-R10b-SM-5S2UM 60.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 59.2
GTEX-14BIL-0011-R10a-SM-5SI75 59.0
GTEX-ZUA1-0011-R10a-SM-51MT6 59.0
GTEX-13FLW-0011-R10b-SM-5LZZF 58.8
GTEX-13NYB-0011-R10a-SM-5KM43 58.6
GTEX-X4EP-0011-R10B-SM-4QASJ 58.3
GTEX-13N1W-0011-R10b-SM-5MR4H 58.2
GTEX-13X6J-0011-R10b-SM-5PNWA 56.8
GTEX-13X6K-0011-R10a-SM-5P9JR 56.6
GTEX-ZF28-0011-R10a-SM-4WWEH 56.5
GTEX-T6MN-0011-R10A-SM-32QP7 56.3
GTEX-NPJ8-0011-R10A-SM-2YUMO 56.1
GTEX-Z93S-0011-R10a-SM-4RGNM 56.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 55.7
GTEX-13QIC-0011-R10a-SM-5O9C7 55.4
GTEX-T5JC-0011-R10A-SM-32PM2 55.4
GTEX-N7MT-0011-R10A-SM-2I3E1 55.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 55.2
GTEX-12WSH-0011-R10a-SM-5LZUS 55.1
GTEX-145MG-0011-R10a-SM-5PNWG 54.5
GTEX-WVLH-0011-R10A-SM-3MJFM 54.5
GTEX-X585-0011-R10A-SM-46MUY 54.5
GTEX-13OW8-0011-R10a-SM-5L3H6 54.2
GTEX-145MH-0011-R10b-SM-5PNUK 54.1
GTEX-NL3H-0011-R10A-SM-2I3E9 53.9
GTEX-N7MS-0011-R10A-SM-2HMJK 53.1
GTEX-131YS-0011-R10b-SM-5EQ5N 52.8
GTEX-ZDXO-0011-R10a-SM-4WWD8 52.6
GTEX-ZVT3-0011-R10b-SM-57WB6 52.6
GTEX-YJ89-0011-R10a-SM-4SOK9 52.3
GTEX-131XH-0011-R10a-SM-5EGLJ 52.2
GTEX-13FHO-0011-R10b-SM-5J2MM 52.0
GTEX-145LS-0011-R10a-SM-5PNUQ 51.4
GTEX-11H98-0011-R10b-SM-5NQ98 51.1
GTEX-12WSD-0011-R10b-SM-5GU79 50.8
GTEX-X4XX-0011-R10B-SM-46MWO 50.7
GTEX-13S7M-0011-R10b-SM-5PNZB 50.1
GTEX-WWYW-0011-R10A-SM-3NB35 50.0
GTEX-13OW6-0011-R10a-SM-5L3HE 49.3
GTEX-WL46-0011-R10A-SM-3MJFQ 49.1
GTEX-YFC4-0011-R10a-SM-4SOK5 49.1
GTEX-12WSM-0011-R10a-SM-5DUWV 48.9
GTEX-P44H-0011-R10A-SM-2XCEK 48.8
GTEX-13X6I-0011-R10a-SM-5PNWI 48.6
GTEX-WZTO-0011-R10B-SM-4E3KB 48.6
GTEX-12WSE-0011-R10b-SM-5P9JV 47.8
GTEX-13FXS-0011-R10a-SM-5J2MA 47.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 47.7
GTEX-RVPU-0011-R10A-SM-2XCAH 47.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 47.5
GTEX-139TS-0011-R10a-SM-5K7TU 47.3
GTEX-13JUV-0011-R10b-SM-5LZXR 46.8
GTEX-13OVL-0011-R10a-SM-5L3GS 46.6
GTEX-147F4-0011-R10b-SM-5S2WC 45.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 45.1
GTEX-13G51-0011-R10b-SM-5LZYF 44.9
GTEX-QMR6-0011-R10A-SM-32PKO 44.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 44.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 44.4
GTEX-S7SE-0011-R10A-SM-2XCDF 44.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 43.7
GTEX-OXRN-0011-R10A-SM-2I5GC 43.5
GTEX-145LU-0011-R10a-SM-5PNWJ 43.3
GTEX-13QJC-0011-R10a-SM-5SI63 42.5
GTEX-12126-0011-R10b-SM-5BC6T 42.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 41.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 39.5
GTEX-XMD1-0011-R10A-SM-4AT4A 39.5
GTEX-13SLW-0011-R10a-SM-5S2UI 39.3
GTEX-13N2G-0011-R10a-SM-5MR34 39.2
GTEX-11ZUS-0011-R10b-SM-5BC79 39.0
GTEX-NL4W-0011-R10A-SM-2I3DY 38.3
GTEX-11WQC-0011-R10a-SM-57WCT 37.4
GTEX-QVUS-0011-R10A-SM-3GIK3 36.7
GTEX-X261-0011-R10B-SM-4E3JT 35.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 35.3
GTEX-ZXG5-0011-R10a-SM-57WDD 34.9
GTEX-QDT8-0011-R10A-SM-32PKG 32.4
GTEX-13NZA-0011-R10b-SM-5KM54 32.3
GTEX-TSE9-0011-R10A-SM-3DB7O 32.1
GTEX-13JVG-0011-R10b-SM-5KM2P 32.0
GTEX-11WQK-0011-R10a-SM-5BC6R 30.7
GTEX-12WSA-0011-R10b-SM-5P9ET 30.7
GTEX-OXRO-0011-R10A-SM-2I5EH 29.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 28.9
GTEX-1445S-0011-R10a-SM-5PNWB 25.9
GTEX-ZV68-0011-R10a-SM-51MT7 24.5
GTEX-14753-0011-R10b-SM-5S2WE 23.7
GTEX-131XW-0011-R10a-SM-5DUVA 22.9
GTEX-1477Z-0011-R10b-SM-5S2RF 21.9
GTEX-13IVO-0011-R10a-SM-5LZY3 21.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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