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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:286.5TPM
GTEx:39.9RPKM
FANTOM5:627.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA027999

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

286.5

overview Male, age 65
Sample 1
TPM: 315.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 290.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 300.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 239.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

39.9

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 39.9
Samples: 88

Max RPKM: 66.4
Min RPKM: 12.7
Std RPKM: 11
Median RPKM: 39.2
GTEX-WQUQ-2426-SM-4MVNW 66.4
GTEX-133LE-1426-SM-5IFH1 63.0
GTEX-139YR-2226-SM-5IFFW 57.8
GTEX-11NSD-1726-SM-5N9C3 57.8
GTEX-1399R-2026-SM-5K7WN 57.3
GTEX-ZEX8-1826-SM-57WBH 57.1
GTEX-VUSG-1726-SM-4KKZL 57.1
GTEX-ZC5H-2326-SM-4WAYT 56.3
GTEX-ZYFG-2026-SM-5E43Y 55.2
GTEX-XUZC-1426-SM-4BRV3 54.1
GTEX-XGQ4-1326-SM-4GIDU 54.1
GTEX-ZYWO-1526-SM-5SIAL 52.3
GTEX-131XF-1326-SM-5GCMQ 51.2
GTEX-ZZ64-0526-SM-5GZXM 50.3
GTEX-Y5LM-1626-SM-4VDTB 49.4
GTEX-ZA64-1226-SM-5HL7B 48.9
GTEX-13O61-1326-SM-5KM31 48.8
GTEX-ZXES-1526-SM-5NQ95 48.7
GTEX-11EQ9-1326-SM-5985X 48.3
GTEX-YB5E-1526-SM-5IFIE 48.2
GTEX-X5EB-1626-SM-4E3IV 47.8
GTEX-145LT-1026-SM-5LU9O 47.5
GTEX-UPK5-2026-SM-4JBIM 47.4
GTEX-111YS-1426-SM-5GID8 47.2
GTEX-11DXZ-1326-SM-5H11X 47.2
GTEX-11DXX-1626-SM-5H11H 45.9
GTEX-ZTPG-2626-SM-57WFX 45.7
GTEX-YEC4-1726-SM-4W21E 45.6
GTEX-13PL7-2626-SM-5IFH4 45.6
GTEX-14E6E-1626-SM-5RQI7 45.3
GTEX-ZLV1-1126-SM-4WWBW 45.0
GTEX-WFJO-0926-SM-4LVM2 45.0
GTEX-VJYA-0926-SM-4KL1N 44.8
GTEX-ZVZP-1826-SM-5GZXB 43.2
GTEX-YF7O-1826-SM-5IFIU 42.8
GTEX-14DAR-1426-SM-5RQIR 42.3
GTEX-12BJ1-1926-SM-5HL9Z 41.4
GTEX-11I78-1126-SM-5A5K5 41.3
GTEX-13113-1226-SM-5EGHT 41.1
GTEX-1399S-2026-SM-5KM4B 40.6
GTEX-11P82-0826-SM-5P9GU 40.6
GTEX-X15G-1426-SM-4PQZK 40.5
GTEX-ZTSS-0926-SM-59865 40.2
GTEX-XXEK-1026-SM-4BRUW 39.4
GTEX-13RTK-0826-SM-5Q5C6 38.9
GTEX-1122O-1326-SM-5H11F 38.8
GTEX-13FTW-2026-SM-5IJE2 38.7
GTEX-148VJ-2226-SM-5NQ9M 38.6
GTEX-ZP4G-1626-SM-57WGD 38.5
GTEX-Y9LG-1626-SM-5IFHM 38.4
GTEX-WH7G-1626-SM-4LVMY 38.3
GTEX-13FH7-1226-SM-5IJFK 38.1
GTEX-ZLFU-1526-SM-4WWBT 38.0
GTEX-11P7K-1626-SM-5GU63 37.8
GTEX-13D11-0726-SM-5LZZB 36.5
GTEX-XAJ8-0526-SM-47JYK 36.4
GTEX-Z9EW-0926-SM-5CVMM 36.0
GTEX-1399U-2126-SM-5IFEZ 35.8
GTEX-11VI4-1626-SM-5EQKO 35.8
GTEX-13CF3-1226-SM-5LZXN 35.6
GTEX-13QBU-1926-SM-5IJEW 35.5
GTEX-139T6-1026-SM-5IJGC 35.2
GTEX-11XUK-1426-SM-5EQMG 34.9
GTEX-ZTX8-0526-SM-59HLD 34.4
GTEX-131XG-1726-SM-5LZUR 34.2
GTEX-ZPCL-1726-SM-57WEO 34.1
GTEX-Y3IK-1726-SM-4YCCR 34.0
GTEX-13O21-1026-SM-5IJDU 33.4
GTEX-WRHK-1026-SM-4MVOD 33.3
GTEX-WFG8-1626-SM-4LVMB 33.2
GTEX-ZVP2-1726-SM-5GU5P 31.1
GTEX-1192X-2526-SM-59868 30.5
GTEX-ZPIC-2326-SM-57WDW 30.2
GTEX-XBED-1426-SM-4AT4G 30.1
GTEX-ZQG8-2526-SM-57WEQ 29.6
GTEX-ZVT2-2126-SM-5NQ93 29.4
GTEX-WFG7-1726-SM-4LVME 28.7
GTEX-Y114-1426-SM-4TT6W 26.8
GTEX-145ME-0926-SM-5O9AR 25.1
GTEX-13111-1426-SM-5DUW3 24.2
GTEX-ZF2S-1726-SM-57WFT 23.8
GTEX-12WSK-1526-SM-5CVNO 22.1
GTEX-XMK1-1826-SM-4B66F 21.2
GTEX-WEY5-1526-SM-4LMJF 20.0
GTEX-117YX-0326-SM-5GICL 18.4
GTEX-13OVI-1926-SM-5IJCG 16.9
GTEX-ZQUD-0926-SM-57WE3 13.0
GTEX-111CU-1326-SM-5NQ8L 12.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

627.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 627.9
FF:10024-101D6 15,40,85 years, mixed 627.9

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.