Cell atlas - HIGD1B - The Human Protein Atlas

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HIGD1B

TISSUE

CELL

CANCER

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	HIGD1B
Gene description	HIG1 hypoxia inducible domain family, member 1B
Protein class	Predicted intracellular proteins Predicted membrane proteins
Predicted localization	Intracellular,Membrane
Number of transcripts	3
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Mixed
Protein evidence	Evidence at protein level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Mixed Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	HIGD1B (HGNC Symbol)
Synonyms	CLST11240, CLST11240-15
Description	HIG1 hypoxia inducible domain family, member 1B (HGNC Symbol)
Entrez gene summary	This gene encodes a member of the hypoxia inducible gene 1 (HIG1) domain family. The encoded protein is localized to the cell membrane and has been linked to tumorigenesis and the progression of pituitary adenomas. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2012]
Chromosome	17
Cytoband	q21.31
Chromosome location (bp)	44846353 - 44850480
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000131097 (version 83.38)
Entrez gene	51751
UniProt	Q9P298 (UniProt - Evidence at protein level)
neXtProt	NX_Q9P298
Antibodypedia	HIGD1B antibodies

PROTEIN BROWSER

HIGD1B-001	HIGD1B-002	HIGD1B-003

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
HIGD1B-001 ENSP00000253410 ENST00000253410	Q9P298 [Direct mapping] HIG1 domain family member 1B Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	99 aa 11.1 kDa	No	2
HIGD1B-002 ENSP00000468511 ENST00000591513	Q9P298 [Direct mapping] HIG1 domain family member 1B Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	99 aa 11.1 kDa	No	2
HIGD1B-003 ENSP00000464703 ENST00000587021	K7EID5 [Direct mapping] HIG1 domain family member 1B Show all	Predicted intracellular proteins Show all		54 aa 6.3 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.