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THOC6

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.6TPM
GTEx:15.8RPKM
FANTOM5:3.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA052953

  

Chondrocytes

 Low  

Fibroblasts

 Low  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA052953

  

Adipocytes

 Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

11.6
N/A Female, age 80
Sample 1
TPM: 12.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 6.7
N/A Female, age 57
Sample 3
TPM: 4.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 19.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 15.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 14.3
Samples: 350

Max RPKM: 32.8
Min RPKM: 5.9
Std RPKM: 3.7
Median RPKM: 13.9
GTEX-ZYVF-0226-SM-5GIEG 32.8
GTEX-NPJ8-0226-SM-48TBN 26.6
GTEX-11EQ8-0226-SM-5EQ5G 25.1
GTEX-XXEK-2426-SM-4BRUS 24.5
GTEX-QESD-1526-SM-2S1QT 23.8
GTEX-T5JW-1726-SM-3GADN 23.6
GTEX-POMQ-2326-SM-5S2VS 23.5
GTEX-11EMC-2826-SM-5PNY6 23.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 18.1
Samples: 227

Max RPKM: 46.8
Min RPKM: 8.3
Std RPKM: 5.3
Median RPKM: 17.5
GTEX-13X6H-1726-SM-5Q5EH 46.8
GTEX-13IVO-2426-SM-5K7V9 40.3
GTEX-YJ89-1926-SM-5IFJ6 32.4
GTEX-11EM3-1126-SM-5A5KM 32.1
GTEX-12584-2126-SM-5FQUM 30.9
GTEX-Y114-1326-SM-4TT9A 29.7
GTEX-1399S-1426-SM-5PNYQ 29.4
GTEX-XXEK-1426-SM-4BRW1 28.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

3.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 3.7
FF:10010-101C1 65,65,76 years, mixed 3.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.