Tissue expression of ZCCHC9 - Summary - The Human Protein Atlas

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ZCCHC9

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	ZCCHC9
Gene description	Zinc finger, CCHC domain containing 9
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	4
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in most tissues.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA038404
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	ZCCHC9 (HGNC Symbol)
Synonyms	DKFZp761J139, PPP1R41
Description	Zinc finger, CCHC domain containing 9 (HGNC Symbol)
Entrez gene summary
Chromosome	5
Cytoband	q14.1
Chromosome location (bp)	81301590 - 81313297
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000131732 (version 83.38)
Entrez gene	84240
UniProt	Q8N567 (UniProt - Evidence at transcript level)
neXtProt	NX_Q8N567
Antibodypedia	ZCCHC9 antibodies

PROTEIN BROWSER

ZCCHC9-001	ZCCHC9-002	ZCCHC9-003	ZCCHC9-004

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ZCCHC9-001 ENSP00000254037 ENST00000254037	Q8N567 [Direct mapping] Zinc finger CCHC domain-containing protein 9 A0A024RAL5 [Target identity:100%; Query identity:100%] Zinc finger, CCHC domain containing 9, isoform CRA_a Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005730 [nucleolus] GO:0006351 [transcription, DNA-templated] GO:0008270 [zinc ion binding] GO:0010923 [negative regulation of phosphatase activity] GO:0044822 [poly(A) RNA binding] Show all	271 aa 30.5 kDa	No	0
ZCCHC9-002 ENSP00000385047 ENST00000407610	Q8N567 [Direct mapping] Zinc finger CCHC domain-containing protein 9 A0A024RAL5 [Target identity:100%; Query identity:100%] Zinc finger, CCHC domain containing 9, isoform CRA_a Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005730 [nucleolus] GO:0006351 [transcription, DNA-templated] GO:0008270 [zinc ion binding] GO:0010923 [negative regulation of phosphatase activity] GO:0044822 [poly(A) RNA binding] Show all	271 aa 30.5 kDa	No	0
ZCCHC9-003 ENSP00000369546 ENST00000380199	Q8N567 [Direct mapping] Zinc finger CCHC domain-containing protein 9 A0A024RAL5 [Target identity:100%; Query identity:100%] Zinc finger, CCHC domain containing 9, isoform CRA_a Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005730 [nucleolus] GO:0006351 [transcription, DNA-templated] GO:0008270 [zinc ion binding] GO:0010923 [negative regulation of phosphatase activity] GO:0044822 [poly(A) RNA binding] Show all	271 aa 30.5 kDa	No	0
ZCCHC9-004 ENSP00000412637 ENST00000438268	Q8N567 [Direct mapping] Zinc finger CCHC domain-containing protein 9 A0A024RAL5 [Target identity:100%; Query identity:100%] Zinc finger, CCHC domain containing 9, isoform CRA_a Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005730 [nucleolus] GO:0006351 [transcription, DNA-templated] GO:0008270 [zinc ion binding] GO:0010923 [negative regulation of phosphatase activity] GO:0044822 [poly(A) RNA binding] Show all	271 aa 30.5 kDa	No	0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.