We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
MCCC2
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:60.3TPM
GTEx:22.1RPKM
FANTOM5:168.0Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Low
Hepatocytes:High
 

Antibody staining

Antibody HPA038300

 

Antibody HPA038301

 

Antibody HPA061546

 

Bile duct cells

Low   Low   Medium  

Hepatocytes

High   Medium   High  
     
     
     

LIVER - HPA RNA-seq

Average TPM

60.3

N/A Female, age 60
Sample 1
TPM: 53.3
overview Male, age 54
Sample 2
TPM: 46.2
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 48.6
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 83.0
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 52.3
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 59.1
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 54.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 51.8
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 61.5
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 92.9
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

22.1

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 22.1
Samples: 119

Max RPKM: 34.6
Min RPKM: 6.9
Std RPKM: 5.2
Median RPKM: 22.3
GTEX-R53T-0326-SM-48FEC 34.6
GTEX-ZPU1-0826-SM-57WG2 33.5
GTEX-14E1K-0326-SM-5S2PE 33.4
GTEX-OOBJ-0826-SM-3NB2K 33.3
GTEX-RM2N-1926-SM-48FCU 31.1
GTEX-Z9EW-0426-SM-5CVM9 29.9
GTEX-1399R-1226-SM-5P9GF 29.7
GTEX-145MF-0826-SM-5QGQA 29.6
GTEX-Y5V5-0926-SM-4VBPZ 29.5
GTEX-ZF2S-3026-SM-4WWCH 29.4
GTEX-U3ZN-0226-SM-3DB8D 28.9
GTEX-14753-1626-SM-5NQ9L 28.7
GTEX-14A5I-1726-SM-5QGQ5 28.4
GTEX-ZYT6-0626-SM-5E45V 28.2
GTEX-13PVR-0126-SM-5S2PY 28.1
GTEX-YB5E-0326-SM-5IFHU 27.9
GTEX-11OF3-0726-SM-5BC4Z 27.8
GTEX-14AS3-0126-SM-5Q5F4 27.6
GTEX-11DXZ-0126-SM-5EGGY 27.5
GTEX-13N11-0926-SM-5IJG2 27.3
GTEX-12WSM-0726-SM-5GCOW 27.2
GTEX-147F4-1426-SM-5LUA8 26.9
GTEX-11WQC-0726-SM-5EQMR 26.6
GTEX-139TU-0826-SM-5IJFG 26.6
GTEX-X3Y1-2726-SM-4PQZH 26.5
GTEX-145MO-2326-SM-5NQ9K 26.2
GTEX-QEG4-1826-SM-4R1JN 26.1
GTEX-S4Z8-0526-SM-4AD4T 26.1
GTEX-ZF29-2026-SM-4WWB7 26.1
GTEX-T6MN-1226-SM-3NMA5 26.0
GTEX-Y5LM-0426-SM-4VBRO 25.9
GTEX-RTLS-1326-SM-46MUN 25.7
GTEX-S32W-1926-SM-4AD63 25.6
GTEX-131XH-0626-SM-5LZWH 25.5
GTEX-13FTZ-0726-SM-5IFFY 25.4
GTEX-QV44-0326-SM-4R1KD 25.0
GTEX-P78B-1326-SM-3P611 24.8
GTEX-11DXY-0526-SM-5EGGQ 24.7
GTEX-14DAQ-1726-SM-5S2R2 24.7
GTEX-ZAB5-0426-SM-5CVMI 24.6
GTEX-QESD-2026-SM-447BI 24.2
GTEX-13N2G-0926-SM-5IFGJ 24.1
GTEX-PX3G-0826-SM-48TZS 24.1
GTEX-1399T-0826-SM-5IFES 23.8
GTEX-13OW6-2626-SM-5IFF2 23.8
GTEX-TKQ2-1726-SM-4DXUP 23.7
GTEX-YEC4-0826-SM-5P9FV 23.7
GTEX-ZZPU-0426-SM-5GZYH 23.2
GTEX-11EQ9-0526-SM-5A5JZ 23.0
GTEX-11ZVC-0726-SM-5FQT9 23.0
GTEX-YFC4-1526-SM-5IFJS 22.9
GTEX-SJXC-1226-SM-4DM78 22.7
GTEX-UPK5-1426-SM-4JBHH 22.7
GTEX-ZVP2-0626-SM-51MSO 22.7
GTEX-12696-0826-SM-5EGGE 22.5
GTEX-139TS-1426-SM-5IFJD 22.5
GTEX-13FTW-1126-SM-5J2NV 22.5
GTEX-13NYB-1026-SM-5IFH3 22.5
GTEX-WFON-1726-SM-4LVMQ 22.5
GTEX-S33H-1626-SM-4AD68 22.3
GTEX-UPIC-0926-SM-4IHLV 22.2
GTEX-ZVT3-1626-SM-5GU66 22.2
GTEX-11NV4-1326-SM-5HL6V 22.1
GTEX-131YS-1626-SM-5HL6C 22.1
GTEX-13VXU-0926-SM-5IFFH 21.7
GTEX-12WSL-0226-SM-5CVMJ 21.6
GTEX-RU72-1426-SM-46MUF 21.6
GTEX-13112-1426-SM-5EGH8 21.5
GTEX-132NY-0926-SM-5P9G3 21.4
GTEX-1497J-0726-SM-5Q5D1 20.7
GTEX-X4EO-1126-SM-4QARQ 20.7
GTEX-1269C-0626-SM-5FQSS 20.6
GTEX-13FLV-0326-SM-5N9DJ 20.4
GTEX-13SLX-1226-SM-5S2Q6 20.4
GTEX-REY6-1226-SM-48FDR 20.3
GTEX-RWSA-1426-SM-47JXA 20.2
GTEX-YECK-1926-SM-4W21H 20.2
GTEX-12WSI-0226-SM-5GCNA 20.0
GTEX-11NUK-1226-SM-5P9GM 19.9
GTEX-11ZTS-1426-SM-5EQMM 19.9
GTEX-12WSD-1426-SM-5GCN9 19.8
GTEX-Q2AG-1126-SM-48U1P 19.7
GTEX-WQUQ-1926-SM-4OOSA 19.6
GTEX-13113-1326-SM-5GCOI 19.4
GTEX-X261-1726-SM-4PQYT 19.4
GTEX-X4EP-1026-SM-4QAS5 19.4
GTEX-Q734-0326-SM-48U15 19.3
GTEX-147JS-1126-SM-5RQIW 19.2
GTEX-RNOR-1426-SM-48FDJ 19.1
GTEX-12KS4-1326-SM-5LUB3 19.0
GTEX-WZTO-0626-SM-4PQYY 18.9
GTEX-WYVS-1926-SM-4PQZ2 18.8
GTEX-QDVN-0826-SM-48TZ2 18.6
GTEX-11ZUS-2526-SM-59872 18.3
GTEX-RN64-1826-SM-48FDV 18.2
GTEX-13NZ9-1326-SM-5MR3V 18.0
GTEX-XOTO-0826-SM-4B65O 17.9
GTEX-13QJC-0726-SM-5RQJK 17.8
GTEX-QEL4-1226-SM-447A4 17.6
GTEX-145LU-1326-SM-5LU9N 17.3
GTEX-13NZB-0626-SM-5IFH6 17.0
GTEX-144GM-1326-SM-5LU5E 16.9
GTEX-X4XY-1626-SM-46MVN 16.5
GTEX-12WSG-0626-SM-5FQTQ 15.9
GTEX-139YR-0226-SM-5IFEM 15.7
GTEX-VUSG-0126-SM-4KL1X 15.6
GTEX-146FH-1526-SM-5NQBU 15.2
GTEX-14C38-1526-SM-5RQJ7 15.2
GTEX-1212Z-0226-SM-59HLF 15.0
GTEX-13O3O-1826-SM-5IFGW 14.7
GTEX-XBEC-1526-SM-4AT68 14.6
GTEX-ZAB4-0826-SM-5LU9D 13.3
GTEX-ZVT4-0626-SM-5E45T 12.9
GTEX-131XE-0326-SM-5LZVO 12.2
GTEX-UTHO-2426-SM-4JBHD 11.7
GTEX-ZTPG-1426-SM-51MT3 11.6
GTEX-ZYY3-0626-SM-5NQ6W 11.6
GTEX-11GSP-0626-SM-5986T 10.4
GTEX-12ZZZ-1326-SM-59HKW 6.9
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

168.0

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 168.0
FF:10018-101C9 64,69,70 years, mixed 168.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.