Tissue expression of SPATA6 - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	SPATA6
Gene description	Spermatogenesis associated 6
Protein class	Cancer-related genes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	4
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enhanced (testis)
GTEx:	Tissue enriched (testis)
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (testis)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (testis)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	SPATA6 (HGNC Symbol)
Synonyms	FLJ10007, SRF-1, SRF1
Description	Spermatogenesis associated 6 (HGNC Symbol)
Entrez gene summary
Chromosome	1
Cytoband	p33
Chromosome location (bp)	48295372 - 48472208
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000132122 (version 83.38)
Entrez gene	54558
UniProt	Q9NWH7 (UniProt - Evidence at protein level)
neXtProt	NX_Q9NWH7
Antibodypedia	SPATA6 antibodies

PROTEIN BROWSER

SPATA6-001	SPATA6-002	SPATA6-005	SPATA6-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SPATA6-001 ENSP00000360913 ENST00000371847	Q9NWH7 [Direct mapping] Spermatogenesis-associated protein 6 Show all	Phobius predicted secreted proteins Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Protein evidence (Kim et al 2014) Show all	GO:0005576 [extracellular region] GO:0007275 [multicellular organismal development] GO:0007283 [spermatogenesis] GO:0030154 [cell differentiation] GO:0032027 [myosin light chain binding] GO:0044458 [motile cilium assembly] GO:0097224 [sperm connecting piece] Show all	488 aa 56 kDa	No	0
SPATA6-002 ENSP00000360909 ENST00000371843	Q9NWH7 [Direct mapping] Spermatogenesis-associated protein 6 Show all	Phobius predicted secreted proteins Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Show all	GO:0005576 [extracellular region] GO:0007275 [multicellular organismal development] GO:0007283 [spermatogenesis] GO:0030154 [cell differentiation] GO:0044458 [motile cilium assembly] GO:0097224 [sperm connecting piece] Show all	472 aa 54 kDa	No	0
SPATA6-005 ENSP00000360907 ENST00000371841	B1AN51 [Direct mapping] Spermatogenesis-associated protein 6 Show all	Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Show all		249 aa 28.9 kDa	No	0
SPATA6-201 ENSP00000379502 ENST00000396199	A8MU33 [Direct mapping] Spermatogenesis-associated protein 6 Show all	Phobius predicted secreted proteins Predicted intracellular proteins Cancer-related genes Mutational cancer driver genes Show all		474 aa 54.4 kDa	No	0