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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:181.2TPM
GTEx:94.9RPKM
FANTOM5:128.9Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:High
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA003307

 

Antibody HPA003575

 

Cells in red pulp

Low   High  

Cells in white pulp

Low   Medium  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

181.2

overview Female, age 60
Sample 1
TPM: 158.8
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 121.6
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 224.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 190.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 210.9
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

94.9

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 94.9
Samples: 104

Max RPKM: 162.3
Min RPKM: 40.2
Std RPKM: 23.9
Median RPKM: 94.7
GTEX-Y8LW-0126-SM-4VBS1 162.3
GTEX-Y5LM-0326-SM-4VBRN 146.0
GTEX-X3Y1-0126-SM-4PQZA 145.5
GTEX-ZLFU-0526-SM-4WWBN 137.3
GTEX-13PVR-0326-SM-5RQJY 137.1
GTEX-139T6-0226-SM-5IFGZ 136.9
GTEX-146FR-1926-SM-5NQA6 135.5
GTEX-QCQG-0226-SM-48U28 135.0
GTEX-11DXX-0726-SM-5H12X 129.7
GTEX-147F3-0126-SM-5NQBJ 127.4
GTEX-YEC4-0126-SM-4W21T 127.3
GTEX-ZVP2-0526-SM-51MSC 127.3
GTEX-11EQ9-0426-SM-5A5JY 125.3
GTEX-XAJ8-0126-SM-47JYG 124.4
GTEX-ZP4G-0326-SM-4YCEF 123.5
GTEX-11P7K-0426-SM-5BC5H 122.5
GTEX-12WSN-0126-SM-5DUX5 119.7
GTEX-Z9EW-0726-SM-5HL9H 117.7
GTEX-11LCK-0126-SM-5A5M5 117.0
GTEX-QLQW-0126-SM-447BK 117.0
GTEX-1122O-0526-SM-5N9DM 116.4
GTEX-YFCO-0926-SM-5LUA5 114.2
GTEX-X4LF-0226-SM-4QAS8 114.0
GTEX-13FH7-1326-SM-5IFG8 113.2
GTEX-Y3I4-0126-SM-4TT26 112.8
GTEX-117YX-2126-SM-5GIEL 112.6
GTEX-14DAR-0326-SM-5S2PS 111.3
GTEX-144GN-2126-SM-5O99D 110.6
GTEX-11XUK-0426-SM-5EQML 109.6
GTEX-14E6E-1226-SM-5S2R5 109.0
GTEX-XMK1-0126-SM-4B65F 108.3
GTEX-13CF3-0226-SM-5J1NW 105.7
GTEX-11VI4-0126-SM-5GU6Z 104.1
GTEX-W5WG-0626-SM-4SOID 102.3
GTEX-Q2AH-0226-SM-48U1I 101.8
GTEX-U4B1-0526-SM-4DXTK 101.2
GTEX-132QS-0226-SM-5IFFZ 101.1
GTEX-WFON-0126-SM-4LVM9 100.3
GTEX-12WSJ-0526-SM-5GCOZ 99.6
GTEX-XXEK-0126-SM-4BRVU 99.4
GTEX-ZAB5-0526-SM-5CVMU 98.9
GTEX-PLZ6-0126-SM-48TC6 98.6
GTEX-11NSD-0426-SM-5N9CR 98.3
GTEX-ZDTT-1026-SM-5KM19 98.3
GTEX-ZLWG-0426-SM-4WWFA 97.5
GTEX-131XE-1126-SM-5EGHW 97.1
GTEX-QV31-0126-SM-447BP 97.1
GTEX-XQ8I-1726-SM-4BOQB 97.0
GTEX-13PL7-1126-SM-5MR5O 96.8
GTEX-ZVZP-0726-SM-59HKA 95.2
GTEX-R55G-0226-SM-48FEI 94.9
GTEX-12WSK-0126-SM-5GCO7 94.7
GTEX-WHWD-0126-SM-4OORS 94.6
GTEX-1211K-0426-SM-5FQTP 94.0
GTEX-OOBJ-0926-SM-48TDO 93.9
GTEX-13111-0126-SM-5EGHO 93.6
GTEX-XUJ4-0226-SM-4BOP8 93.1
GTEX-YB5E-0426-SM-5IFHR 91.9
GTEX-13N11-0126-SM-5KM2Z 91.2
GTEX-QMRM-0226-SM-4R1K7 91.2
GTEX-YB5K-1926-SM-4VDT4 90.4
GTEX-U3ZN-0126-SM-4DXUM 89.4
GTEX-RUSQ-0126-SM-47JWV 88.9
GTEX-11P81-1326-SM-5GU5S 88.0
GTEX-ZYFG-0726-SM-5GIDX 86.4
GTEX-XGQ4-0126-SM-4AT4H 85.7
GTEX-1399S-0226-SM-5IFFG 84.7
GTEX-12BJ1-0726-SM-5EGGF 83.9
GTEX-ZYWO-0226-SM-5GZX3 83.2
GTEX-QDVN-0526-SM-48TZ4 82.8
GTEX-ZZPU-0126-SM-5E446 81.8
GTEX-VJYA-0126-SM-4KL1P 80.9
GTEX-13U4I-1626-SM-5IFFR 80.7
GTEX-145MN-0126-SM-5RQHY 80.5
GTEX-S4Z8-0226-SM-4AD5K 80.3
GTEX-OIZH-0926-SM-48TBR 78.3
GTEX-P4QS-0926-SM-48TBS 78.3
GTEX-ZPU1-1026-SM-4YCEQ 77.8
GTEX-XPVG-0626-SM-4B65B 76.9
GTEX-UPK5-1626-SM-4JBHI 74.3
GTEX-O5YT-0926-SM-48TDG 73.6
GTEX-1399R-0226-SM-5IJGG 72.8
GTEX-ZV6S-0826-SM-5NQ6Z 72.5
GTEX-131XG-0426-SM-5IFGD 72.4
GTEX-POMQ-0126-SM-48TD6 71.9
GTEX-S3XE-0626-SM-4AD6B 71.4
GTEX-P4PP-0926-SM-48TBZ 71.0
GTEX-UJHI-0126-SM-4IHLP 71.0
GTEX-139YR-0426-SM-5IFFV 69.6
GTEX-QV44-0126-SM-4R1KH 69.3
GTEX-Y114-0726-SM-4TT6U 68.9
GTEX-13VXT-1326-SM-5LU3Y 67.7
GTEX-PW2O-0126-SM-48TC8 67.3
GTEX-T5JW-0126-SM-4DM6K 66.5
GTEX-13X6H-0726-SM-5Q5BX 66.0
GTEX-13S86-0126-SM-5S2PI 64.6
GTEX-12WSG-0926-SM-5EGIH 63.1
GTEX-146FQ-0626-SM-5LU9U 62.3
GTEX-PX3G-0926-SM-48U12 57.5
GTEX-XV7Q-0126-SM-4BRVK 53.6
GTEX-X585-1826-SM-4QAS3 52.2
GTEX-U3ZH-0126-SM-4DXUK 49.9
GTEX-Y3IK-0126-SM-4WWE9 48.3
GTEX-Q734-0226-SM-48U1A 40.2
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

128.9

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 128.9
FF:10025-101D7 39,50,70 years, male 128.9

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